Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog HTCS_Pga - Bacteroidaceae

Properties
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator
Biological process: Pectic galactan utilization
Effector: Pectic galactan
Phylum: Bacteroidetes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacteroides cellulosilyticus DSM 14838 6 1
Bacteroides coprophilus DSM 18228
Bacteroides dorei DSM 17855
Bacteroides eggerthii DSM 20697
Bacteroides fragilis NCTC 9343
Bacteroides ovatus ATCC 8483 1 1
Bacteroides plebeius DSM 17135
Bacteroides stercoris ATCC 43183
Bacteroides thetaiotaomicron VPI-5482 6 1
Bacteroides uniformis ATCC 8492
Bacteroides vulgatus ATCC 8482
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ganC
*
Bacteroides cellulosilyticus DSM 14838

Site:
position = -100
score = 10.6753
sequence = CATGTCCTTTTTGT-(7)-TATGTCCGATATCT

Gene: BACCELL_05455: Predicted endo-1,4-beta-galactosidase (EC 3.2.1.89)
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
*
Bacteroides ovatus ATCC 8483

Site:
position = -99
score = 11.9127
sequence = TTCGTCCTATTTTT-(7)-TATGTCCAATCTGT

Gene: BACOVA_05493: Predicted endo-1,4-beta-galactosidase (EC 3.2.1.89)
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -99
score = 11.9127
sequence = TTCGTCCTATTTTT-(7)-TATGTCCAATCTGT

Gene: BT4672: Predicted endo-1,4-beta-galactosidase (EC 3.2.1.89)
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Predicted endo-1,4-beta-galactosidase (EC 3.2.1.89)
susC_Pga
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_05454: TonB-dependent outer membrane transporter of pectic galactan oligomers
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_05491: TonB-dependent outer membrane transporter of pectic galactan oligomers
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4671: TonB-dependent outer membrane transporter of pectic galactan oligomers
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
TonB-dependent outer membrane transporter of pectic galactan oligomers
susD_Pga
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_05453: Outer membrane polysaccharide binding protein for pectic galactan oligomers
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343

Gene: BF3145: Outer membrane polysaccharide binding protein for pectic galactan oligomers
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_05490: Outer membrane polysaccharide binding protein for pectic galactan oligomers
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4670: Outer membrane polysaccharide binding protein for pectic galactan oligomers
 
Bacteroides uniformis ATCC 8492

Gene: BACUNI_01211: Outer membrane polysaccharide binding protein for pectic galactan oligomers
 
Bacteroides vulgatus ATCC 8482
Outer membrane polysaccharide binding protein for pectic galactan oligomers
BT4669
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_05452: Conserved hypothetical protein, secreted, putatively involved in pectic galactan utilization
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_02281: Conserved hypothetical protein, secreted, putatively involved in pectic galactan utilization
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_05489: Conserved hypothetical protein, secreted, putatively involved in pectic galactan utilization
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4669: Conserved hypothetical protein, secreted, putatively involved in pectic galactan utilization
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_1378: Conserved hypothetical protein, secreted, putatively involved in pectic galactan utilization
Conserved hypothetical protein, secreted, putatively involved in pectic galactan utilization
ganB
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_05451: Pectic galactan endo-1,4-beta-galactosidase (EC 3.2.1.89)
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_02273: Pectic galactan endo-1,4-beta-galactosidase (EC 3.2.1.89)
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_05488: Pectic galactan endo-1,4-beta-galactosidase (EC 3.2.1.89)
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183

Gene: BACSTE_01653: Pectic galactan endo-1,4-beta-galactosidase (EC 3.2.1.89)
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4668: Pectic galactan endo-1,4-beta-galactosidase (EC 3.2.1.89)
 
Bacteroides uniformis ATCC 8492

Gene: BACUNI_01204: Pectic galactan endo-1,4-beta-galactosidase (EC 3.2.1.89)
 
Bacteroides vulgatus ATCC 8482
Pectic galactan endo-1,4-beta-galactosidase (EC 3.2.1.89)
bgaA
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_05450: Putative beta-galactosidase
 
Bacteroides coprophilus DSM 18228

Gene: BACCOPRO_00203: Putative beta-galactosidase
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00672: Putative beta-galactosidase
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343

Gene: BF1815: Putative beta-galactosidase
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_05487: Putative beta-galactosidase
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_00247: Putative beta-galactosidase
 
Bacteroides stercoris ATCC 43183

Gene: BACSTE_01654: Putative beta-galactosidase
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4667: Putative beta-galactosidase
 
Bacteroides uniformis ATCC 8492

Gene: BACUNI_01205: Putative beta-galactosidase
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_4134: Putative beta-galactosidase
Putative beta-galactosidase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulatory Sites [ FASTA format ] DOWNLOAD