Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog HTCS_Ogl-2 - Bacteroidaceae

Properties
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator
Biological process: O-glycans utilization
Effector: O-glycans
Phylum: Bacteroidetes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 2 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacteroides cellulosilyticus DSM 14838
Bacteroides coprophilus DSM 18228
Bacteroides dorei DSM 17855
Bacteroides eggerthii DSM 20697
Bacteroides fragilis NCTC 9343
Bacteroides ovatus ATCC 8483
Bacteroides plebeius DSM 17135
Bacteroides stercoris ATCC 43183
Bacteroides thetaiotaomicron VPI-5482 5 2
Bacteroides uniformis ATCC 8492
Bacteroides vulgatus ATCC 8482
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
fucO
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -292
score = 12.3066
sequence = ATTAGTGATTTTTGAAA-(4)-ATTAGTGATTTTTGAAA

Gene: BT4136: Alpha-L-fucosidase 1
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Alpha-L-fucosidase 1
 
CRON 2.
susC_Ogl-3
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_02601: TonB-dependent outer membrane transporter of O-glycans oligomers
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_02752: TonB-dependent outer membrane transporter of O-glycans oligomers
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -120
score = 12.3066
sequence = ATTCATGCTTATTGAAA-(4)-AAGAATGAATTGTTAAC

Gene: BT4135: TonB-dependent outer membrane transporter of O-glycans oligomers
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
TonB-dependent outer membrane transporter of O-glycans oligomers
susD_Ogl-3
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_02602: Outer membrane polysaccharide binding protein for O-glycans oligomers
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_02751: Outer membrane polysaccharide binding protein for O-glycans oligomers
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4134: Outer membrane polysaccharide binding protein for O-glycans oligomers
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Outer membrane polysaccharide binding protein for O-glycans oligomers
chiB
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4133: Putative chitobiase
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Putative chitobiase
chiC
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4132: Putative chitobiase
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Putative chitobiase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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