Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog GlpR - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode:
Biological process: Glycerol utilization
Effector: Glycerol 3-phosphate
Phylum: Proteobacteria/delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 7 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028
Desulfovibrio desulfuricans G20 4 1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1 4 1
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638
Desulfovibrio vulgaris Hildenborough 4 1
Desulfovibrio vulgaris str. Miyazaki F 4 1
Lawsonia intracellularis PHE/MN1-00
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
glpR
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
*
Desulfovibrio desulfuricans G20

Site:
position = -344
score = 4.9384
sequence = GTGAACATATGTTAAA

Site:
position = -363
score = 5.29945
sequence = GGTGACATATGTTCAT

Gene: Dde_0407: Glycerol utilization transcriptional regulator, DeoR family
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
*
Desulfovibrio magneticus RS-1

Site:
position = -71
score = 4.38268
sequence = CATAACAATTGTACTC

Gene: DMR_27700: Glycerol utilization transcriptional regulator, DeoR family
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -316
score = 5.04321
sequence = GTTTACATATGTTCAG

Site:
position = -204
score = 4.11059
sequence = AATACCAAATGTCTTT

Gene: DVU3131: Glycerol utilization transcriptional regulator, DeoR family
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -153
score = 5.02736
sequence = GGTGACATATGTACGT

Site:
position = -243
score = 4.55321
sequence = GTTACCATTTGGAAAA

Gene: DvMF_0812: Glycerol utilization transcriptional regulator, DeoR family
 
Lawsonia intracellularis PHE/MN1-00
Glycerol utilization transcriptional regulator, DeoR family
glpD
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20

Gene: Dde_0408: Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_27710: Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU3132: Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0811: Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
 
Lawsonia intracellularis PHE/MN1-00
Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
glpF
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20

Gene: Dde_0409: Glycerol uptake facilitator protein
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_27720: Glycerol uptake facilitator protein
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU3133: Glycerol uptake facilitator protein
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0810: Glycerol uptake facilitator protein
 
Lawsonia intracellularis PHE/MN1-00
Glycerol uptake facilitator protein
glpK
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20

Gene: Dde_0410: Glycerol kinase (EC 2.7.1.30)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_27730: Glycerol kinase (EC 2.7.1.30)
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU3134: Glycerol kinase (EC 2.7.1.30)
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0809: Glycerol kinase (EC 2.7.1.30)
 
Lawsonia intracellularis PHE/MN1-00
Glycerol kinase (EC 2.7.1.30)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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