Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DVU0525 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: MarR
Regulation mode:
Biological process: Multidrug resistance
Effector:
Phylum: Proteobacteria/delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028
Desulfovibrio desulfuricans G20
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638 2 1
Desulfovibrio vulgaris Hildenborough 2 1
Desulfovibrio vulgaris str. Miyazaki F 2 1
Lawsonia intracellularis PHE/MN1-00
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
DVU0525
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
*
Desulfovibrio salexigens DSM 2638

Site:
position = -58
score = 5.44064
sequence = AATTGACTAGTCAACA

Site:
position = -43
score = 5.39267
sequence = AGTTGACTAGTCAATT

Site:
position = -28
score = 5.24838
sequence = TGTTGATAAATCAACA

Gene: Desal_3721: Transcriptional regulator, MarR family
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -28
score = 5.30455
sequence = AGTTGCCTATGCAACT

Gene: DVU0525: Transcriptional regulator, MarR family
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -45
score = 4.9585
sequence = TGTTGCCCTCTCAACA

Site:
position = -30
score = 5.20147
sequence = AGTTGCAAAGGCAACA

Gene: DvMF_1429: Transcriptional regulator, MarR family
 
Lawsonia intracellularis PHE/MN1-00
Transcriptional regulator, MarR family
DVU0526
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20

Gene: Dde_2729: Efflux pump involved in antibiotic resistance, MFS family
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_3720: Efflux pump involved in antibiotic resistance, MFS family
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0526: Efflux pump involved in antibiotic resistance, MFS family
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1430: Efflux pump involved in antibiotic resistance, MFS family
 
Lawsonia intracellularis PHE/MN1-00
Efflux pump involved in antibiotic resistance, MFS family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD