Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog FMN - Thermoanaerobacterales

Properties
Regulator type: RNA regulatory element
Name: FMN
RFAM: RF00050
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Caldicellulosiruptor saccharolyticus DSM 8903 4 1
Moorella thermoacetica ATCC 39073 3 1
Thermoanaerobacter tengcongensis MB4 1 1
Thermoanaerobacter ethanolicus X514 5 2
Anaerocellum thermophilum DSM 6725 4 1
Thermoanaerobacter italicus Ab9 5 2
Carboxydothermus hydrogenoformans Z-2901 4 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ribD
*
Caldicellulosiruptor saccharolyticus DSM 8903

Site:
position = -248
score = 114.94
sequence = GTCCATCCTTCGGGG...

Gene: Csac_0794: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
*
Moorella thermoacetica ATCC 39073

Site:
position = -273
score = 115.07
sequence = ACGTCCTTCGGGGTT...

Gene: Moth_0915: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
 
Thermoanaerobacter tengcongensis MB4
*
Thermoanaerobacter ethanolicus X514

Site:
position = -199
score = 113.69
sequence = AAAACCTTCAGGGAT...

Gene: Teth514_0020: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
*
Anaerocellum thermophilum DSM 6725

Site:
position = -252
score = 114.52
sequence = GTCCATCCTTCGGGG...

Gene: Athe_0564: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
*
Thermoanaerobacter italicus Ab9

Site:
position = -198
score = 113.69
sequence = AAAACCTTCAGGGAT...

Gene: Thit_0021: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
*
Carboxydothermus hydrogenoformans Z-2901

Site:
position = -196
score = 119.85
sequence = TTACTACCTTCGGGG...

Gene: CHY_1475: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
ribE
 
Caldicellulosiruptor saccharolyticus DSM 8903

Gene: Csac_0793: Riboflavin synthase alpha chain (EC 2.5.1.9)
 
Moorella thermoacetica ATCC 39073

Gene: Moth_0916: Riboflavin synthase alpha chain (EC 2.5.1.9)
 
Thermoanaerobacter tengcongensis MB4
 
Thermoanaerobacter ethanolicus X514

Gene: Teth514_0021: Riboflavin synthase alpha chain (EC 2.5.1.9)
 
Anaerocellum thermophilum DSM 6725

Gene: Athe_0563: Riboflavin synthase alpha chain (EC 2.5.1.9)
 
Thermoanaerobacter italicus Ab9

Gene: Thit_0022: Riboflavin synthase alpha chain (EC 2.5.1.9)
 
Carboxydothermus hydrogenoformans Z-2901

Gene: CHY_1474: Riboflavin synthase alpha chain (EC 2.5.1.9)
Riboflavin synthase alpha chain (EC 2.5.1.9)
ribBA
 
Caldicellulosiruptor saccharolyticus DSM 8903

Gene: Csac_0792: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
 
Moorella thermoacetica ATCC 39073

Gene: Moth_0917: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
 
Thermoanaerobacter tengcongensis MB4
 
Thermoanaerobacter ethanolicus X514

Gene: Teth514_0022: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
 
Anaerocellum thermophilum DSM 6725

Gene: Athe_0562: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
 
Thermoanaerobacter italicus Ab9

Gene: Thit_0023: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
 
Carboxydothermus hydrogenoformans Z-2901

Gene: CHY_1473: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
ribH
 
Caldicellulosiruptor saccharolyticus DSM 8903

Gene: Csac_0791: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
Moorella thermoacetica ATCC 39073

Gene: Moth_0918: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
Thermoanaerobacter tengcongensis MB4
 
Thermoanaerobacter ethanolicus X514

Gene: Teth514_0023: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
Anaerocellum thermophilum DSM 6725

Gene: Athe_0561: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
Thermoanaerobacter italicus Ab9

Gene: Thit_0024: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
Carboxydothermus hydrogenoformans Z-2901

Gene: CHY_1472: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
CRON 2.
ribU
 
Caldicellulosiruptor saccharolyticus DSM 8903

Gene: Csac_1786: Substrate-specific component RibU of riboflavin ECF transporter
 
Moorella thermoacetica ATCC 39073
*
Thermoanaerobacter tengcongensis MB4

Site:
position = -217
score = 121.29
sequence = AAAATCTTCGGGGCA...

Gene: TTE0534: Substrate-specific component RibU of riboflavin ECF transporter
*
Thermoanaerobacter ethanolicus X514

Site:
position = -209
score = 117.48
sequence = TAAATCTTCGGGGCA...

Gene: Teth514_0486: Substrate-specific component RibU of riboflavin ECF transporter
 
Anaerocellum thermophilum DSM 6725

Gene: Athe_1221: Substrate-specific component RibU of riboflavin ECF transporter
*
Thermoanaerobacter italicus Ab9

Site:
position = -209
score = 120.11
sequence = TAAATCTTCGGGGCA...

Gene: Thit_0536: Substrate-specific component RibU of riboflavin ECF transporter
 
Carboxydothermus hydrogenoformans Z-2901
Substrate-specific component RibU of riboflavin ECF transporter
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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