Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog TPP - Streptomycetaceae

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Actinobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptomyces griseus subsp. griseus NBRC 13350 7 3
Streptomyces scabiei 87.22 7 3
Streptomyces avermitilis MA-4680 9 4
Streptomyces coelicolor A3(2) 7 3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
thiO
*
Streptomyces griseus subsp. griseus NBRC 13350

Site:
position = -111
score = 54.48
sequence = GTAGAACACTCGCGG...

Gene: SGR_5394: Glycine oxidase ThiO (EC 1.4.3.19)
*
Streptomyces scabiei 87.22

Site:
position = -110
score = 53.09
sequence = GTAGAGCACTCGCGG...

Gene: SCAB_67741: Glycine oxidase ThiO (EC 1.4.3.19)
*
Streptomyces avermitilis MA-4680

Site:
position = -112
score = 54.26
sequence = GTAAAGCACTCGCGG...

Gene: SAV_6095: Glycine oxidase ThiO (EC 1.4.3.19)
*
Streptomyces coelicolor A3(2)

Site:
position = -108
score = 50.41
sequence = AAGGCACTCGCGGGA...

Gene: SCO2107: Glycine oxidase ThiO (EC 1.4.3.19)
Glycine oxidase ThiO (EC 1.4.3.19)
thiS
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_5393: Sulfur carrier protein ThiS
 
Streptomyces scabiei 87.22

Gene: SCAB_67731: Sulfur carrier protein ThiS
 
Streptomyces avermitilis MA-4680

Gene: SAV_6094: Sulfur carrier protein ThiS
 
Streptomyces coelicolor A3(2)

Gene: SCO2108: Sulfur carrier protein ThiS
Sulfur carrier protein ThiS
thiG
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_5392: Thiazole biosynthesis protein ThiG
 
Streptomyces scabiei 87.22

Gene: SCAB_67721: Thiazole biosynthesis protein ThiG
 
Streptomyces avermitilis MA-4680

Gene: SAV_6093: Thiazole biosynthesis protein ThiG
 
Streptomyces coelicolor A3(2)

Gene: SCO2109: Thiazole biosynthesis protein ThiG
Thiazole biosynthesis protein ThiG
 
CRON 2.
thiB
*
Streptomyces griseus subsp. griseus NBRC 13350

Site:
position = -121
score = 49.1
sequence = CATATTCCGACAGGG...

Gene: SGR_1857: Thiamin ABC transporter, substrate-binding component
*
Streptomyces scabiei 87.22

Site:
position = -188
score = 49.19
sequence = CATATTCCGACAGGG...

Gene: SCAB_25941: Thiamin ABC transporter, substrate-binding component
*
Streptomyces avermitilis MA-4680

Site:
position = -187
score = 51.44
sequence = CATATTCCGACAGGG...

Gene: SAV_2620: Thiamin ABC transporter, substrate-binding component
*
Streptomyces coelicolor A3(2)

Site:
position = -184
score = 51.18
sequence = TATTCCGACAGGGGA...

Gene: SCO5646: Thiamin ABC transporter, substrate-binding component
Thiamin ABC transporter, substrate-binding component
thiP
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_1856: Thiamin ABC transporter, transmembrane component
 
Streptomyces scabiei 87.22

Gene: SCAB_25931: Thiamin ABC transporter, transmembrane component
 
Streptomyces avermitilis MA-4680

Gene: SAV_2619: Thiamin ABC transporter, transmembrane component
 
Streptomyces coelicolor A3(2)

Gene: SCO5647: Thiamin ABC transporter, transmembrane component
Thiamin ABC transporter, transmembrane component
thiQ
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_1855: Thiamin ABC transporter, ATPase component
 
Streptomyces scabiei 87.22

Gene: SCAB_25921: Thiamin ABC transporter, ATPase component
 
Streptomyces avermitilis MA-4680

Gene: SAV_2618: Thiamin ABC transporter, ATPase component
 
Streptomyces coelicolor A3(2)

Gene: SCO5648: Thiamin ABC transporter, ATPase component
Thiamin ABC transporter, ATPase component
 
CRON 3.
cytX
 
Streptomyces griseus subsp. griseus NBRC 13350
 
Streptomyces scabiei 87.22
*
Streptomyces avermitilis MA-4680

Site:
position = -87
score = 65.95
sequence = CGTACCGGACACGGG...

Gene: SAV_7206: Predicted hydroxymethylpyrimidine transporter CytX
 
Streptomyces coelicolor A3(2)
Predicted hydroxymethylpyrimidine transporter CytX
thiD
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_1917: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
 
Streptomyces scabiei 87.22

Gene: SCAB_26491: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
 
Streptomyces avermitilis MA-4680

Gene: SAV_7205: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
 
Streptomyces coelicolor A3(2)

Gene: SCO5563: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
 
CRON 4.
thiC
*
Streptomyces griseus subsp. griseus NBRC 13350

Site:
position = -127
score = 41.95
sequence = CCTTTGCACACGCGG...

Gene: SGR_3653: Thiamin biosynthesis protein ThiC
*
Streptomyces scabiei 87.22

Site:
position = -148
score = 39.37
sequence = TTTGCACACGCGGGA...

Gene: SCAB_46341: Thiamin biosynthesis protein ThiC
*
Streptomyces avermitilis MA-4680

Site:
position = -150
score = 39.87
sequence = CCTTTGCACACGCGG...

Gene: SAV_4265: Thiamin biosynthesis protein ThiC
*
Streptomyces coelicolor A3(2)

Site:
position = -54
score = 22.76
sequence = TGCGTCGACCGCCGA...

Gene: SCO3928: Thiamin biosynthesis protein ThiC
Thiamin biosynthesis protein ThiC
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD