Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog FMN - Desulfuromonadales

Properties
Regulator type: RNA regulatory element
Name: FMN
RFAM: RF00050
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Phylum: Proteobacteria/Delta
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Geobacter metallireducens GS-15
Geobacter sulfurreducens PCA
Geobacter uraniumreducens Rf4
Geobacter sp. FRC-32
Geobacter sp. M21
Geobacter lovleyi SZ
Pelobacter propionicus DSM 2379 1 1
Pelobacter carbinolicus str. DSM 2380 1 1
Desulfuromonas acetoxidans DSM 684 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ribB
 
Geobacter metallireducens GS-15
 
Geobacter sulfurreducens PCA
 
Geobacter uraniumreducens Rf4
 
Geobacter sp. FRC-32
 
Geobacter sp. M21
 
Geobacter lovleyi SZ
*
Pelobacter propionicus DSM 2379

Site:
position = -265
score = 112.28
sequence = CTTATTCTCAGGGCG...

Gene: Ppro_0312: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Pelobacter carbinolicus str. DSM 2380

Site:
position = -244
score = 105.71
sequence = GTAAAGTTCTCAGGG...

Gene: Pcar_0884: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Desulfuromonas acetoxidans DSM 684

Site:
position = -228
score = 124.56
sequence = CCTATTCTCAGGGCG...

Gene: Dace_1777: 3,4-dihydroxy-2-butanone 4-phosphate synthase
3,4-dihydroxy-2-butanone 4-phosphate synthase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD