Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog FMN - Xanthomonadales

Properties
Regulator type: RNA regulatory element
Name: FMN
RFAM: RF00050
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Phylum: Proteobacteria/Gamma
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Xylella fastidiosa 9a5c
Xanthomonas axonopodis pv. citri str. 306 2 1
Xanthomonas campestris pv. campestris str. ATCC 33913 3 1
Stenotrophomonas maltophilia K279a 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ribE
 
Xylella fastidiosa 9a5c

Gene: XF0952: Riboflavin synthase alpha chain (EC 2.5.1.9)
*
Xanthomonas axonopodis pv. citri str. 306

Site:
position = -346
score = 95.96
sequence = AACGTCTTCAGGGCG...

Gene: XAC0748: Riboflavin synthase alpha chain (EC 2.5.1.9)
*
Xanthomonas campestris pv. campestris str. ATCC 33913

Site:
position = -336
score = 101.18
sequence = AACGTCTTCAGGGCG...

Gene: XCC0695: Riboflavin synthase alpha chain (EC 2.5.1.9)
*
Stenotrophomonas maltophilia K279a

Site:
position = -219
score = 104.76
sequence = AACGTCTTCAGGGCG...

Gene: Smlt0727: Riboflavin synthase alpha chain (EC 2.5.1.9)
Riboflavin synthase alpha chain (EC 2.5.1.9)
ribBA
 
Xylella fastidiosa 9a5c

Gene: XF0953: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
 
Xanthomonas axonopodis pv. citri str. 306

Gene: XAC0749: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
 
Xanthomonas campestris pv. campestris str. ATCC 33913

Gene: XCC0696: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
 
Stenotrophomonas maltophilia K279a

Gene: Smlt0728: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
ribH
 
Xylella fastidiosa 9a5c

Gene: XF0954: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
Xanthomonas axonopodis pv. citri str. 306

Gene: XAC0750: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
Xanthomonas campestris pv. campestris str. ATCC 33913

Gene: XCC0697: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
Stenotrophomonas maltophilia K279a

Gene: Smlt0729: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD