Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog HTCS_Rgu-2 - Bacteroidaceae

Properties
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector:
Phylum: Bacteroidetes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 39 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacteroides cellulosilyticus DSM 14838
Bacteroides coprophilus DSM 18228
Bacteroides dorei DSM 17855 28 8
Bacteroides eggerthii DSM 20697
Bacteroides fragilis NCTC 9343
Bacteroides ovatus ATCC 8483 27 8
Bacteroides plebeius DSM 17135 12 6
Bacteroides stercoris ATCC 43183
Bacteroides thetaiotaomicron VPI-5482 30 8
Bacteroides uniformis ATCC 8492
Bacteroides vulgatus ATCC 8482 28 8
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ramA
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
*
Bacteroides dorei DSM 17855

Site:
position = -88
score = 9.61917
sequence = TGAACAATATTCCA-(6)-TGAATAAAATTCCA

Gene: BACDOR_00375: Alfa-L-rhamnosidase (EC 3.2.1.40)
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
*
Bacteroides vulgatus ATCC 8482

Site:
position = -88
score = 9.61917
sequence = TGAACAATATTCCA-(6)-TGAATAAAATTCCA

Gene: BVU_0174: Alfa-L-rhamnosidase (EC 3.2.1.40)
Alfa-L-rhamnosidase (EC 3.2.1.40)
BVU_0175
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00374: Predicted methylesterase
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0175: Predicted methylesterase
Predicted methylesterase
rgaE2
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00373: Rhamnogalacturonan endolyase
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0176: Rhamnogalacturonan endolyase
Rhamnogalacturonan endolyase
BVU_0177
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00372: Predicted alpha-L-rhamnosidase, GH28 family
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0177: Predicted alpha-L-rhamnosidase, GH28 family
Predicted alpha-L-rhamnosidase, GH28 family
 
CRON 2.
BT2680
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_03334: Beta-galactosidase (EC 3.2.1.23)
 
Bacteroides coprophilus DSM 18228
*
Bacteroides dorei DSM 17855

Site:
position = -87
score = 8.99174
sequence = TGAACGAATTTCTA-(6)-TGTATCTTATTCTA

Gene: BACDOR_00393: Beta-galactosidase (EC 3.2.1.23)
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_00248: Beta-galactosidase (EC 3.2.1.23)
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -111
score = 7.47019
sequence = GATTCATTTTTAAA-(6)-TGAACAAATCTCTA

Gene: BT2680: Beta-galactosidase (EC 3.2.1.23)
 
Bacteroides uniformis ATCC 8492
*
Bacteroides vulgatus ATCC 8482

Site:
position = -87
score = 8.99174
sequence = TGAACGAATTTCTA-(6)-TGTATCTTATTCTA

Gene: BVU_0162: Beta-galactosidase (EC 3.2.1.23)
Beta-galactosidase (EC 3.2.1.23)
BVU_0161
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00394: Predicted beta-galactosidase, PL11 family
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0161: Predicted beta-galactosidase, PL11 family
Predicted beta-galactosidase, PL11 family
 
CRON 3.
bguA
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
*
Bacteroides dorei DSM 17855

Site:
position = -94
score = 9.29039
sequence = TATACGAATTTCCA-(6)-TGTACTTCTTTCTA

Gene: BACDOR_00368: Beta-glucuronidase (EC 3.2.1.31)
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
*
Bacteroides ovatus ATCC 8483

Site:
position = -141
score = 8.19596
sequence = TGGACAATATTTCA-(6)-TGTAGTTTTGTACA

Site:
position = -83
score = 8.54903
sequence = GATACAATATTCTA-(6)-TGTACATCTTTCTA

Gene: BACOVA_04950: Beta-glucuronidase (EC 3.2.1.31)
*
Bacteroides plebeius DSM 17135

Site:
position = -96
score = 8.51916
sequence = TACACAATATTCCA-(6)-TGAAGAATTATCGA

Gene: BACPLE_00503: Beta-glucuronidase (EC 3.2.1.31)
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -111
score = 8.54903
sequence = GATACAATATTCTA-(6)-TGTACATCTTTCTA

Gene: BT4151: Beta-glucuronidase (EC 3.2.1.31)
 
Bacteroides uniformis ATCC 8492
*
Bacteroides vulgatus ATCC 8482

Site:
position = -94
score = 9.29039
sequence = TATACGAATTTCCA-(6)-TGTACTTCTTTCTA

Gene: BVU_0181: Beta-glucuronidase (EC 3.2.1.31)
Beta-glucuronidase (EC 3.2.1.31)
rghT
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00367: Rhamnogalacturonan acetylesterase (EC 3.1.1.86)
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_04949: Rhamnogalacturonan acetylesterase (EC 3.1.1.86)
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4150: Rhamnogalacturonan acetylesterase (EC 3.1.1.86)
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0182: Rhamnogalacturonan acetylesterase (EC 3.1.1.86)
Rhamnogalacturonan acetylesterase (EC 3.1.1.86)
pehX3
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00366: Polygalacturonase (EC 3.2.1.15)
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 2
Bacteroides ovatus ATCC 8483

Gene: BACOVA_04948: Polygalacturonase (EC 3.2.1.15)

Gene: BACOVA_04997: Polygalacturonase (EC 3.2.1.15)
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 2
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4148: Polygalacturonase (EC 3.2.1.15)

Gene: BT4149: Polygalacturonase (EC 3.2.1.15)
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0183: Polygalacturonase (EC 3.2.1.15)
Polygalacturonase (EC 3.2.1.15)
BT4147
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00365: Conserved hypothetical protein
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_04947: Conserved hypothetical protein
*
Bacteroides plebeius DSM 17135

Site:
position = -96
score = 8.58625
sequence = TGTATGATAATCGA-(6)-TGTATAATAATCCA

Gene: BACPLE_00253: Conserved hypothetical protein
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4147: Conserved hypothetical protein
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0184: Conserved hypothetical protein
Conserved hypothetical protein
BVU_0185
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00364: Conserved hypothetical protein
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0185: Conserved hypothetical protein
Conserved hypothetical protein
pehX2
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00363: Predicted endopolygalacturonase
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_04946: Predicted endopolygalacturonase
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_00254: Predicted endopolygalacturonase
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4146: Predicted endopolygalacturonase
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0186: Predicted endopolygalacturonase
Predicted endopolygalacturonase
ramA
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_01179: Predicted alpha-L-rhamnosidase
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00362: Predicted alpha-L-rhamnosidase
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_04945: Predicted alpha-L-rhamnosidase
*
Bacteroides plebeius DSM 17135

Site:
position = -136
score = 8.04414
sequence = CGTACAAAAATCCA-(6)-TGTACATTCCTATA

Gene: BACPLE_03595: Predicted alpha-L-rhamnosidase
 
Bacteroides stercoris ATCC 43183

Gene: BACSTE_00370: Predicted alpha-L-rhamnosidase
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4145: Predicted alpha-L-rhamnosidase
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0187: Predicted alpha-L-rhamnosidase
Predicted alpha-L-rhamnosidase
BT2958
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
*
Bacteroides dorei DSM 17855

Site:
position = -85
score = 9.26695
sequence = TGGACGAATTTCCA-(6)-TGTATCTTATTCTA

Gene: BACDOR_00405: Putative glycosil hydrolase, GH115 family
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
*
Bacteroides ovatus ATCC 8483

Site:
position = -79
score = 8.70464
sequence = TGAACGAAATTCTA-(6)-TGTACATGATTCTA

Gene: BACOVA_02777: Putative glycosil hydrolase, GH115 family
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT2958: Putative glycosil hydrolase, GH115 family
 
Bacteroides uniformis ATCC 8492
*
Bacteroides vulgatus ATCC 8482

Site:
position = -85
score = 9.26695
sequence = TGGACGAATTTCCA-(6)-TGTATCTTATTCTA

Gene: BVU_0154: Putative glycosil hydrolase, GH115 family
Putative glycosil hydrolase, GH115 family
pehX5
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_00873: Polygalacturonase (EC 3.2.1.15)
 
Bacteroides coprophilus DSM 18228
 2
Bacteroides dorei DSM 17855

Gene: BACDOR_00406: Polygalacturonase (EC 3.2.1.15)

Gene: BACDOR_04630: Polygalacturonase (EC 3.2.1.15)
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_04954: Polygalacturonase (EC 3.2.1.15)
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4155: Polygalacturonase (EC 3.2.1.15)
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0153: Polygalacturonase (EC 3.2.1.15)
Polygalacturonase (EC 3.2.1.15)
BT4175
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_03333: Predicted beta-galactosidase, PL11 family
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00407: Predicted beta-galactosidase, PL11 family
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
*
Bacteroides ovatus ATCC 8483

Site:
position = -93
score = 8.33037
sequence = TGATGATTTCTACA-(6)-TGTACAATATTCTA

Gene: BACOVA_04974: Predicted beta-galactosidase, PL11 family
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_00255: Predicted beta-galactosidase, PL11 family
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -183
score = 6.48899
sequence = TGGAATATTGTCCA-(6)-TTTAAATTTGTCCA

Gene: BT4175: Predicted beta-galactosidase, PL11 family
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0152: Predicted beta-galactosidase, PL11 family
Predicted beta-galactosidase, PL11 family
rhiN3
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_03332: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00408: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_04975: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_00256: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4176: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0151: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhaU
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_03331: L-rhamnose mutarotase
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00409: L-rhamnose mutarotase
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_04976: L-rhamnose mutarotase
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_03131: L-rhamnose mutarotase
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4177: L-rhamnose mutarotase
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0150: L-rhamnose mutarotase
L-rhamnose mutarotase
HTCS_Rgu-2
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00410: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 3
Bacteroides ovatus ATCC 8483

Gene: BACOVA_04977: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family

Gene: BACOVA_04993: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family

Gene: BACOVA_05030: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_03129: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
 
Bacteroides stercoris ATCC 43183
*2
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4178: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family

Site:
position = -253
score = 7.96651
sequence = TAAACAAATATTCT-(6)-GGAAGTTTTTTCCA

Gene: BT4182: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0149: Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
Rhamnogalacturonan utilization hybrid two-component system, HTH AraC family
rhaH
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_00088: Rhamnogalacturonyl hydrolase
 
Bacteroides coprophilus DSM 18228
*
Bacteroides dorei DSM 17855

Site:
position = -108
score = 8.85777
sequence = TGAACGAATAAACA-(6)-TGAATGAATTTCTA

Gene: BACDOR_00395: Rhamnogalacturonyl hydrolase
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_04972: Rhamnogalacturonyl hydrolase
*
Bacteroides plebeius DSM 17135

Site:
position = -93
score = 8.93297
sequence = TGTACAAAAGCACA-(6)-TGTACGATATTCCA

Gene: BACPLE_03132: Rhamnogalacturonyl hydrolase
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4173: Rhamnogalacturonyl hydrolase
 
Bacteroides uniformis ATCC 8492
*
Bacteroides vulgatus ATCC 8482

Site:
position = -108
score = 8.85777
sequence = TGAACGAATAAACA-(6)-TGAATGAATTTCTA

Gene: BVU_0160: Rhamnogalacturonyl hydrolase
Rhamnogalacturonyl hydrolase
BACPLE_03130
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_03130: Hypothetical protein
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Hypothetical protein
BVU_0180
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00369: Predicted arabinosidase, GH42 family
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
*
Bacteroides ovatus ATCC 8483

Site:
position = -108
score = 8.73658
sequence = TGTACAAAACTACA-(6)-TGAAATATTGTCCA

Gene: BACOVA_04951: Predicted arabinosidase, GH42 family
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0180: Predicted arabinosidase, GH42 family
Predicted arabinosidase, GH42 family
abnC
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_03341: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00370: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_04952: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_00252: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -128
score = 8.19823
sequence = TGTACGAAACTACA-(6)-TGATAATATCTCCA

Gene: BT4152: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0179: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
BACOVA_04953
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_04953: Hypothetical protein
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Hypothetical protein
pehX4
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_03743: Polygalacturonase (EC 3.2.1.15 )
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_03324: Polygalacturonase (EC 3.2.1.15 )
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_05002: Polygalacturonase (EC 3.2.1.15 )
*
Bacteroides plebeius DSM 17135

Site:
position = -150
score = 8.68569
sequence = TGTACAAAAAGACA-(6)-TGCATGATTCTCTA

Gene: BACPLE_03588: Polygalacturonase (EC 3.2.1.15 )
 
Bacteroides stercoris ATCC 43183

Gene: BACSTE_00201: Polygalacturonase (EC 3.2.1.15 )
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4153: Polygalacturonase (EC 3.2.1.15 )
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_1767: Polygalacturonase (EC 3.2.1.15 )
Polygalacturonase (EC 3.2.1.15 )
BT4154
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00389: Putative deacytylase
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4154: Putative deacytylase
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Putative deacytylase
BT4156
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
*
Bacteroides dorei DSM 17855

Site:
position = -69
score = 9.16267
sequence = TGTATCATTTTTCA-(6)-TGTATGATTTTCCA

Gene: BACDOR_03323: Beta-galactosidase, GH2 family
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_03593: Beta-galactosidase, GH2 family
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4156: Beta-galactosidase, GH2 family
 
Bacteroides uniformis ATCC 8492
*
Bacteroides vulgatus ATCC 8482

Site:
position = -69
score = 9.16267
sequence = TGTATCATTTTTCA-(6)-TGTATGATTTTCCA

Gene: BVU_1768: Beta-galactosidase, GH2 family
Beta-galactosidase, GH2 family
BT4172
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00396: Conserved hypothetical protein
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
*
Bacteroides ovatus ATCC 8483

Site:
position = -89
score = 8.72866
sequence = TGAACGAATCGCCA-(6)-TGGATAATATTCTA

Gene: BACOVA_04967: Conserved hypothetical protein
*
Bacteroides plebeius DSM 17135

Site:
position = -92
score = 9.73141
sequence = TATACAAATTTACA-(6)-TGTACAATACTCCA

Gene: BACPLE_00251: Conserved hypothetical protein
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -123
score = 9.63801
sequence = TGAACAAATATCCA-(6)-TGAATGATATTCTA

Gene: BT4172: Conserved hypothetical protein
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0159: Conserved hypothetical protein
Conserved hypothetical protein
BACOVA_05029
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
*
Bacteroides ovatus ATCC 8483

Site:
position = -113
score = 7.04886
sequence = TGGAAAAAATGACA-(6)-TGGATAATAATCCT

Gene: BACOVA_05029: Hypothetical protein
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Hypothetical protein
rhiN2
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
*
Bacteroides dorei DSM 17855

Site:
position = -91
score = 8.74526
sequence = TGCATAATATTCAA-(6)-TGTACACATTTCCA

Gene: BACDOR_00371: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
*
Bacteroides ovatus ATCC 8483

Site:
position = -115
score = 8.43768
sequence = TGAACGAATTTAAA-(6)-TGCACGGAAATCCA

Gene: BACOVA_04973: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -117
score = 9.20123
sequence = TGGACAAATTTAAA-(6)-TGGACAATATTCCA

Gene: BT4174: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
 
Bacteroides uniformis ATCC 8492
*
Bacteroides vulgatus ATCC 8482

Site:
position = -94
score = 8.74526
sequence = TGCATAATATTCAA-(6)-TGTACACATTTCCA

Gene: BVU_0178: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
BT4181
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_04992: Beta-galactosidase, GH2 family
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4181: Beta-galactosidase, GH2 family
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Beta-galactosidase, GH2 family
 
CRON 4.
susC_Ara-3
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
*
Bacteroides dorei DSM 17855

Site:
position = -118
score = 7.70349
sequence = TAGAGTATTCAACA-(6)-TGTACAATAATCCA

Gene: BACDOR_01719: TonB-dependent outer membrane transporter of arabinan oligosaccharides
 
Bacteroides eggerthii DSM 20697

Gene: BACEGG_01540: TonB-dependent outer membrane transporter of arabinan oligosaccharides
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_00643: TonB-dependent outer membrane transporter of arabinan oligosaccharides
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
*
Bacteroides vulgatus ATCC 8482

Site:
position = -91
score = 7.70349
sequence = TAGAGTATTCAACA-(6)-TGTACAATAATCCA

Gene: BVU_1005: TonB-dependent outer membrane transporter of arabinan oligosaccharides
TonB-dependent outer membrane transporter of arabinan oligosaccharides
susD_Ara-3
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_01720: Outer membrane polysaccharide binding protein for arabinan oligosaccharides
 
Bacteroides eggerthii DSM 20697

Gene: BACEGG_01539: Outer membrane polysaccharide binding protein for arabinan oligosaccharides
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_00644: Outer membrane polysaccharide binding protein for arabinan oligosaccharides
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_1006: Outer membrane polysaccharide binding protein for arabinan oligosaccharides
Outer membrane polysaccharide binding protein for arabinan oligosaccharides
BVU_1007
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_01721: Conserved hypothetical protein
 
Bacteroides eggerthii DSM 20697

Gene: BACEGG_01538: Conserved hypothetical protein
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_00645: Conserved hypothetical protein
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_1007: Conserved hypothetical protein
Conserved hypothetical protein
BVU_1008
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_01722: Putative endo-arabinanase
 
Bacteroides eggerthii DSM 20697

Gene: BACEGG_01537: Putative endo-arabinanase
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_00646: Putative endo-arabinanase
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_1008: Putative endo-arabinanase
Putative endo-arabinanase
 
CRON 5.
BT4163
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
*
Bacteroides ovatus ATCC 8483

Site:
position = -235
score = 7.16697
sequence = TGAATCAGAATACA-(6)-TGTACAGTAATTAA

Gene: BACOVA_02709: Conserved hypothetical protein
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -263
score = 7.15491
sequence = GGCGGTATTTTCCA-(6)-TGTACGATTCTTCA

Gene: BT4163: Conserved hypothetical protein
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Conserved hypothetical protein
susC_Rgu-3
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_02708: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4164: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
susC_Rgu-3
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_02707: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4165: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
BT4166
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_02706: Conserved hypothetical protein
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4166: Conserved hypothetical protein
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Conserved hypothetical protein
BT4167
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_02705: Conserved hypothetical protein
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4167: Conserved hypothetical protein
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Conserved hypothetical protein
susC_Rgu-4
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_02704: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4168: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
susD_Rgu-4
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_02703: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4169: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
pelL1
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4170: Pectate lyase L (EC 4.2.2.2)
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Pectate lyase L (EC 4.2.2.2)
BT4171
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4171: Hypothetical protein
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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