Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog SusR4 - Bacteroidaceae

Properties
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator
Biological process: Polysaccharides utilization
Effector:
Phylum: Bacteroidetes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacteroides cellulosilyticus DSM 14838
Bacteroides coprophilus DSM 18228
Bacteroides dorei DSM 17855
Bacteroides eggerthii DSM 20697
Bacteroides fragilis NCTC 9343
Bacteroides ovatus ATCC 8483 4 1
Bacteroides plebeius DSM 17135
Bacteroides stercoris ATCC 43183
Bacteroides thetaiotaomicron VPI-5482 4 1
Bacteroides uniformis ATCC 8492
Bacteroides vulgatus ATCC 8482
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
BT2159
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
*
Bacteroides ovatus ATCC 8483

Site:
position = -206
score = 5.49233
sequence = ATCTACATTTTTT

Site:
position = -139
score = 5.49233
sequence = ATCTACATAAAGT

Gene: BACOVA_03187: Predicted dehydrogenase
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
*2
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4449: Predicted dehydrogenase

Site:
position = -135
score = 5.49233
sequence = ATCTACATAAAGT

Site:
position = -202
score = 5.49233
sequence = ATCTACATTTTTT

Gene: BT2159: Predicted dehydrogenase
 
Bacteroides uniformis ATCC 8492

Gene: BACUNI_00953: Predicted dehydrogenase
 
Bacteroides vulgatus ATCC 8482
Predicted dehydrogenase
BT2158
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_03188: Predicted dehydrogenase
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 2
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4448: Predicted dehydrogenase

Gene: BT2158: Predicted dehydrogenase
 
Bacteroides uniformis ATCC 8492

Gene: BACUNI_00952: Predicted dehydrogenase
 
Bacteroides vulgatus ATCC 8482
Predicted dehydrogenase
BT2157
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_03189: Predicted secreted glycosyl hydrolase
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 2
Bacteroides thetaiotaomicron VPI-5482

Gene: BT2157: Predicted secreted glycosyl hydrolase

Gene: BT4447: Predicted secreted glycosyl hydrolase
 
Bacteroides uniformis ATCC 8492

Gene: BACUNI_00951: Predicted secreted glycosyl hydrolase
 
Bacteroides vulgatus ATCC 8482
Predicted secreted glycosyl hydrolase
BT2156
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_03190: Predicted sugar phosphate isomerase/epimerase
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 2
Bacteroides thetaiotaomicron VPI-5482

Gene: BT2156: Predicted sugar phosphate isomerase/epimerase

Gene: BT4446: Predicted sugar phosphate isomerase/epimerase
 
Bacteroides uniformis ATCC 8492

Gene: BACUNI_00950: Predicted sugar phosphate isomerase/epimerase
 
Bacteroides vulgatus ATCC 8482
Predicted sugar phosphate isomerase/epimerase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD