Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Rex - Clostridia-3

Properties
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 121 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacteroides pectinophilus ATCC 43243 9 8
Blautia hansenii DSM 20583 3 3
Bryantella formatexigens DSM 14469 2 2
Clostridiales bacterium 1_7_47_FAA 17 14
Clostridium bolteae ATCC BAA-613 17 11
Clostridium nexile DSM 1787 6 4
Clostridium scindens ATCC 35704 2 2
Dorea formicigenerans ATCC 27755 10 9
Dorea longicatena DSM 13814 5 5
Eubacterium eligens ATCC 27750 12 10
Eubacterium rectale ATCC 33656 12 10
Roseburia intestinalis L1-82 12 9
Ruminococcus gnavus ATCC 29149 8 5
Ruminococcus lactaris ATCC 29176 9 7
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
pgpB
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469

Gene: BRYFOR_02184: putative phosphatidylglycerophosphatase B
*
Clostridiales bacterium 1_7_47_FAA

Site:
position = -86
score = 5.25806
sequence = TTGTGAAAATATTAACAT

Gene: Cbac1_010100019049: putative phosphatidylglycerophosphatase B
*
Clostridium bolteae ATCC BAA-613

Site:
position = -81
score = 5.38919
sequence = TTGTTAAAATATTAACAG

Gene: CLOBOL_05166: putative phosphatidylglycerophosphatase B
 
Clostridium nexile DSM 1787
 
Clostridium scindens ATCC 35704
 
Dorea formicigenerans ATCC 27755
 
Dorea longicatena DSM 13814
 
Eubacterium eligens ATCC 27750
 
Eubacterium rectale ATCC 33656

Gene: EUBREC_1572: putative phosphatidylglycerophosphatase B
 
Roseburia intestinalis L1-82
 
Ruminococcus gnavus ATCC 29149
 
Ruminococcus lactaris ATCC 29176
putative phosphatidylglycerophosphatase B
COG491
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469
 
Clostridiales bacterium 1_7_47_FAA

Gene: Cbac1_010100019054: Zn-dependent hydrolase
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_05167: Zn-dependent hydrolase
 
Clostridium nexile DSM 1787
 
Clostridium scindens ATCC 35704
 
Dorea formicigenerans ATCC 27755
 
Dorea longicatena DSM 13814
 
Eubacterium eligens ATCC 27750
 
Eubacterium rectale ATCC 33656
 
Roseburia intestinalis L1-82
 
Ruminococcus gnavus ATCC 29149
 
Ruminococcus lactaris ATCC 29176
Zn-dependent hydrolase
 
CRON 2.
pncB
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583

Gene: BLAHAN_00705: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
Bryantella formatexigens DSM 14469

Gene: BRYFOR_03226: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
*
Clostridiales bacterium 1_7_47_FAA

Site:
position = -140
score = 5.57491
sequence = TTGTTATATTTTTAACAT

Gene: Cbac1_010100002579: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
*
Clostridium bolteae ATCC BAA-613

Site:
position = -141
score = 5.5457
sequence = TTGTTAAATTTTTATCAT

Gene: CLOBOL_06020: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
Clostridium nexile DSM 1787

Gene: CLONEX_02528: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_03141: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
Dorea formicigenerans ATCC 27755

Gene: DORFOR_01810: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
Dorea longicatena DSM 13814

Gene: DORLON_01284: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
Eubacterium eligens ATCC 27750

Gene: EUBELI_00163: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
Eubacterium rectale ATCC 33656
 
Roseburia intestinalis L1-82

Gene: ROSINTL182_01354: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_01334: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_02731: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
 
CRON 3.
aroE
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469
 
Clostridiales bacterium 1_7_47_FAA
 
Clostridium bolteae ATCC BAA-613
*
Clostridium nexile DSM 1787

Site:
position = -63
score = 5.48508
sequence = TTGTTTAAAATTTAACAA

Gene: CLONEX_00392: Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
 
Clostridium scindens ATCC 35704
 
Dorea formicigenerans ATCC 27755
*
Dorea longicatena DSM 13814

Site:
position = -53
score = 4.79697
sequence = TTGTTAAAATATAAGCAA

Gene: DORLON_00700: Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
 
Eubacterium eligens ATCC 27750
*
Eubacterium rectale ATCC 33656

Site:
position = -98
score = 5.04509
sequence = TTGTTAAGTTTTTAACGA

Gene: EUBREC_2843: Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
*
Roseburia intestinalis L1-82

Site:
position = -90
score = 5.37277
sequence = TTGTTAAGTTTTTAACAA

Gene: ROSINTL182_01690: Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
 
Ruminococcus gnavus ATCC 29149
*
Ruminococcus lactaris ATCC 29176

Site:
position = -111
score = 4.79984
sequence = TTGTTTGATAATTAACAA

Gene: RUMLAC_00224: Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
kefA
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469
 
Clostridiales bacterium 1_7_47_FAA
 
Clostridium bolteae ATCC BAA-613
 
Clostridium nexile DSM 1787

Gene: CLONEX_00391: potassium efflux system KefA
 
Clostridium scindens ATCC 35704
 
Dorea formicigenerans ATCC 27755
 
Dorea longicatena DSM 13814
 
Eubacterium eligens ATCC 27750
 
Eubacterium rectale ATCC 33656

Gene: EUBREC_2842: potassium efflux system KefA
 
Roseburia intestinalis L1-82

Gene: ROSINTL182_01691: potassium efflux system KefA
 
Ruminococcus gnavus ATCC 29149
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_00223: potassium efflux system KefA
potassium efflux system KefA
aroD
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469

Gene: BRYFOR_01386: 3-dehydroquinate dehydratase I (EC 4.2.1.10)
 
Clostridiales bacterium 1_7_47_FAA

Gene: Cbac1_010100025132: 3-dehydroquinate dehydratase I (EC 4.2.1.10)
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_00527: 3-dehydroquinate dehydratase I (EC 4.2.1.10)
 
Clostridium nexile DSM 1787

Gene: CLONEX_00390: 3-dehydroquinate dehydratase I (EC 4.2.1.10)
 
Clostridium scindens ATCC 35704
 
Dorea formicigenerans ATCC 27755
 
Dorea longicatena DSM 13814
 
Eubacterium eligens ATCC 27750
 
Eubacterium rectale ATCC 33656

Gene: EUBREC_2841: 3-dehydroquinate dehydratase I (EC 4.2.1.10)
 2
Roseburia intestinalis L1-82

Gene: ROSINTL182_01693: 3-dehydroquinate dehydratase I (EC 4.2.1.10)

Gene: ROSINTL182_01692: 3-dehydroquinate dehydratase I (EC 4.2.1.10)
 
Ruminococcus gnavus ATCC 29149
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_00222: 3-dehydroquinate dehydratase I (EC 4.2.1.10)
3-dehydroquinate dehydratase I (EC 4.2.1.10)
 
CRON 4.
phf1
*
Bacteroides pectinophilus ATCC 43243

Site:
position = -57
score = 4.83523
sequence = GTGTGAAAATATTAACAT

Gene: BACPEC_01128: [Fe] hydrogenase (EC 1.12.7.2)
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469
*
Clostridiales bacterium 1_7_47_FAA

Site:
position = -106
score = 5.48162
sequence = TTGATATAAAATTAACAA

Gene: Cbac1_010100009193: [Fe] hydrogenase (EC 1.12.7.2)
*
Clostridium bolteae ATCC BAA-613

Site:
position = -61
score = 5.56061
sequence = TTGATATAATTTTAACAA

Gene: CLOBOL_05631: [Fe] hydrogenase (EC 1.12.7.2)
 
Clostridium nexile DSM 1787
 
Clostridium scindens ATCC 35704
 
Dorea formicigenerans ATCC 27755
 
Dorea longicatena DSM 13814
*
Eubacterium eligens ATCC 27750

Site:
position = -40
score = 4.76377
sequence = TCGATAATTTTTTGTCAA

Gene: EUBELI_01405: [Fe] hydrogenase (EC 1.12.7.2)
*
Eubacterium rectale ATCC 33656

Site:
position = -219
score = 5.26852
sequence = TTGTGAAAAAAATAACAA

Gene: EUBREC_2390: [Fe] hydrogenase (EC 1.12.7.2)
 
Roseburia intestinalis L1-82
 
Ruminococcus gnavus ATCC 29149
 
Ruminococcus lactaris ATCC 29176
[Fe] hydrogenase (EC 1.12.7.2)
 
CRON 5.
ppsA
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583

Gene: BLAHAN_01698: Pyruvate,phosphate dikinase (EC 2.7.9.1)
 2
Bryantella formatexigens DSM 14469

Gene: BRYFOR_02578: Pyruvate,phosphate dikinase (EC 2.7.9.1)

Gene: BRYFOR_02579: Pyruvate,phosphate dikinase (EC 2.7.9.1)
 
Clostridiales bacterium 1_7_47_FAA

Gene: Cbac1_010100007203: Pyruvate,phosphate dikinase (EC 2.7.9.1)
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_06339: Pyruvate,phosphate dikinase (EC 2.7.9.1)
 
Clostridium nexile DSM 1787

Gene: CLONEX_03647: Pyruvate,phosphate dikinase (EC 2.7.9.1)
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_01563: Pyruvate,phosphate dikinase (EC 2.7.9.1)
*
Dorea formicigenerans ATCC 27755

Site:
position = -148
score = 5.19744
sequence = TTGACAAAAATATAACAA

Gene: DORFOR_02389: Pyruvate,phosphate dikinase (EC 2.7.9.1)
 
Dorea longicatena DSM 13814

Gene: DORLON_01118: Pyruvate,phosphate dikinase (EC 2.7.9.1)
*
Eubacterium eligens ATCC 27750

Site:
position = -71
score = 5.57714
sequence = ATGTTATAATTTTAACAA

Gene: EUBELI_01258: Pyruvate,phosphate dikinase (EC 2.7.9.1)
 
Eubacterium rectale ATCC 33656

Gene: EUBREC_1857: Pyruvate,phosphate dikinase (EC 2.7.9.1)
 
Roseburia intestinalis L1-82

Gene: ROSINTL182_03178: Pyruvate,phosphate dikinase (EC 2.7.9.1)
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_03434: Pyruvate,phosphate dikinase (EC 2.7.9.1)
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_00603: Pyruvate,phosphate dikinase (EC 2.7.9.1)
Pyruvate,phosphate dikinase (EC 2.7.9.1)
 
CRON 6.
fba
 
Bacteroides pectinophilus ATCC 43243

Gene: BACPEC_00474: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
Blautia hansenii DSM 20583

Gene: BLAHAN_03153: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
Bryantella formatexigens DSM 14469
*
Clostridiales bacterium 1_7_47_FAA

Site:
position = -39
score = 5.24363
sequence = TAGTTAATAAAATAACAA

Gene: Cbac1_010100011950: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
*
Clostridium bolteae ATCC BAA-613

Site:
position = -37
score = 5.24363
sequence = TAGTTAATAAAATAACAA

Gene: CLOBOL_02749: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
Clostridium nexile DSM 1787

Gene: CLONEX_01175: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_02348: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
*
Dorea formicigenerans ATCC 27755

Site:
position = -125
score = 5.04845
sequence = TTGTTAAAAATATGACGA

Gene: DORFOR_01112: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
Dorea longicatena DSM 13814

Gene: DORLON_00078: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
Eubacterium eligens ATCC 27750

Gene: EUBELI_01833: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
*
Eubacterium rectale ATCC 33656

Site:
position = -78
score = 4.96164
sequence = GTGTTAAAAATTTAACTT

Gene: EUBREC_0700: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
*
Roseburia intestinalis L1-82

Site:
position = -86
score = 5.23499
sequence = TTGTTATAAATTTAACTT

Gene: ROSINTL182_02682: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_01624: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_01363: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
CRON 7.
pckA
*
Bacteroides pectinophilus ATCC 43243

Site:
position = -135
score = 5.22024
sequence = TCGTTAAAATTTTATCAT

Gene: BACPEC_01917: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
*
Blautia hansenii DSM 20583

Site:
position = -179
score = 5.1574
sequence = TCGTTAAATTTTAAACAA

Gene: BLAHAN_02079: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
*
Bryantella formatexigens DSM 14469

Site:
position = -140
score = 5.24269
sequence = TTGTTAATAAAATATCAT

Gene: BRYFOR_04079: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
*
Clostridiales bacterium 1_7_47_FAA

Site:
position = -69
score = 4.64021
sequence = TTGACTTTTAATTAACAA

Gene: Cbac1_010100026864: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_00502: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Clostridium nexile DSM 1787

Gene: CLONEX_03201: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_03565: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
*
Dorea formicigenerans ATCC 27755

Site:
position = -118
score = 4.79698
sequence = TTGTTAAAAATTTATTGA

Gene: DORFOR_01796: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Dorea longicatena DSM 13814

Gene: DORLON_01077: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
*
Eubacterium eligens ATCC 27750

Site:
position = -110
score = 4.98838
sequence = TCGAGAAAAATTTAACAA

Gene: EUBELI_01169: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
*
Eubacterium rectale ATCC 33656

Site:
position = -82
score = 5.08014
sequence = TTGATTTTTTTTTAACAA

Gene: EUBREC_2002: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
*
Roseburia intestinalis L1-82

Site:
position = -90
score = 4.95851
sequence = TTGACAAAAAAATAACAT

Gene: ROSINTL182_03866: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_01556: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_00832: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
CRON 8.
ladH
*
Bacteroides pectinophilus ATCC 43243

Site:
position = -55
score = 4.89364
sequence = GTGTTATAATTTTAACAG

Gene: BACPEC_00707: Lactaldehyde reductase (EC 1.1.1.77)
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469
*
Clostridiales bacterium 1_7_47_FAA

Site:
position = -81
score = 5.66254
sequence = TTGTTATAATATTAACAA

Gene: Cbac1_010100016333: Lactaldehyde reductase (EC 1.1.1.77)
*
Clostridium bolteae ATCC BAA-613

Site:
position = -92
score = 5.66254
sequence = TTGTTATAATATTAACAA

Gene: CLOBOL_03318: Lactaldehyde reductase (EC 1.1.1.77)
 
Clostridium nexile DSM 1787
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_03784: Lactaldehyde reductase (EC 1.1.1.77)
*
Dorea formicigenerans ATCC 27755

Site:
position = -57
score = 5.0989
sequence = TTGTTAAAATAAAAACAT

Gene: DORFOR_00826: Lactaldehyde reductase (EC 1.1.1.77)
*
Dorea longicatena DSM 13814

Site:
position = -231
score = 5.00652
sequence = AAGTTATTTATATAACAA

Site:
position = -102
score = 4.73796
sequence = TTGTTAAAATAAAGACAT

Gene: DORLON_02552: Lactaldehyde reductase (EC 1.1.1.77)
*
Eubacterium eligens ATCC 27750

Site:
position = -170
score = 4.994
sequence = TTGTTATAAGTATAACAT

Site:
position = -78
score = 4.96073
sequence = TTGTTATTATTTTGTCAT

Gene: EUBELI_20348: Lactaldehyde reductase (EC 1.1.1.77)
 
Eubacterium rectale ATCC 33656

Gene: EUBREC_1091: Lactaldehyde reductase (EC 1.1.1.77)
 2
Roseburia intestinalis L1-82

Gene: ROSINTL182_02299: Lactaldehyde reductase (EC 1.1.1.77)

Gene: ROSINTL182_04795: Lactaldehyde reductase (EC 1.1.1.77)
*
Ruminococcus gnavus ATCC 29149

Site:
position = -33
score = 4.82404
sequence = TTGTTAAAATCAAAACAA

Gene: RUMGNA_02449: Lactaldehyde reductase (EC 1.1.1.77)
*
Ruminococcus lactaris ATCC 29176

Site:
position = -67
score = 4.73796
sequence = TTGTTAAAATAAAGACAT

Gene: RUMLAC_00614: Lactaldehyde reductase (EC 1.1.1.77)
Lactaldehyde reductase (EC 1.1.1.77)
 
CRON 9.
gap
 
Bacteroides pectinophilus ATCC 43243

Gene: BACPEC_01590: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Blautia hansenii DSM 20583

Gene: BLAHAN_03011: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Bryantella formatexigens DSM 14469

Gene: BRYFOR_01251: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
*
Clostridiales bacterium 1_7_47_FAA

Site:
position = -54
score = 5.2274
sequence = TTGATTATTATTTAACAA

Gene: Cbac1_010100019254: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
*
Clostridium bolteae ATCC BAA-613

Site:
position = -54
score = 5.30416
sequence = TTGATTAATATTTAACAA

Gene: CLOBOL_05214: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Clostridium nexile DSM 1787

Gene: CLONEX_03007: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_01404: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
*
Dorea formicigenerans ATCC 27755

Site:
position = -89
score = 4.65237
sequence = TTGATGAATCTTTAACAA

Gene: DORFOR_01431: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Dorea longicatena DSM 13814

Gene: DORLON_02437: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
*
Eubacterium eligens ATCC 27750

Site:
position = -57
score = 4.97365
sequence = TAGTTGAAATTTTAACAA

Gene: EUBELI_01190: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
*
Eubacterium rectale ATCC 33656

Site:
position = -78
score = 5.15707
sequence = TAGTGAAAATTTTAACAA

Gene: EUBREC_1522: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
*
Roseburia intestinalis L1-82

Site:
position = -142
score = 5.15484
sequence = TAGTGAAAAATTTAACAA

Gene: ROSINTL182_01942: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
*
Ruminococcus gnavus ATCC 29149

Site:
position = -97
score = 4.65237
sequence = TTGATGAATCTTTAACAA

Gene: RUMGNA_01756: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
*
Ruminococcus lactaris ATCC 29176

Site:
position = -96
score = 4.61885
sequence = TTGATGAATTCTTAACAA

Gene: RUMLAC_01918: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
pgk
 
Bacteroides pectinophilus ATCC 43243

Gene: BACPEC_01591: Phosphoglycerate kinase (EC 2.7.2.3)
 
Blautia hansenii DSM 20583

Gene: BLAHAN_03010: Phosphoglycerate kinase (EC 2.7.2.3)
 
Bryantella formatexigens DSM 14469

Gene: BRYFOR_01252: Phosphoglycerate kinase (EC 2.7.2.3)
 
Clostridiales bacterium 1_7_47_FAA

Gene: Cbac1_010100019259: Phosphoglycerate kinase (EC 2.7.2.3)
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_05215: Phosphoglycerate kinase (EC 2.7.2.3)
 
Clostridium nexile DSM 1787

Gene: CLONEX_03006: Phosphoglycerate kinase (EC 2.7.2.3)
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_01405: Phosphoglycerate kinase (EC 2.7.2.3)
 
Dorea formicigenerans ATCC 27755

Gene: DORFOR_01432: Phosphoglycerate kinase (EC 2.7.2.3)
 
Dorea longicatena DSM 13814

Gene: DORLON_02436: Phosphoglycerate kinase (EC 2.7.2.3)
 
Eubacterium eligens ATCC 27750

Gene: EUBELI_01189: Phosphoglycerate kinase (EC 2.7.2.3)
 
Eubacterium rectale ATCC 33656

Gene: EUBREC_1523: Phosphoglycerate kinase (EC 2.7.2.3)
 
Roseburia intestinalis L1-82

Gene: ROSINTL182_01943: Phosphoglycerate kinase (EC 2.7.2.3)
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_01757: Phosphoglycerate kinase (EC 2.7.2.3)
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_01919: Phosphoglycerate kinase (EC 2.7.2.3)
Phosphoglycerate kinase (EC 2.7.2.3)
tpi
 
Bacteroides pectinophilus ATCC 43243

Gene: BACPEC_01592: Triosephosphate isomerase (EC 5.3.1.1)
 
Blautia hansenii DSM 20583

Gene: BLAHAN_03009: Triosephosphate isomerase (EC 5.3.1.1)
 
Bryantella formatexigens DSM 14469

Gene: BRYFOR_01253: Triosephosphate isomerase (EC 5.3.1.1)
 
Clostridiales bacterium 1_7_47_FAA

Gene: Cbac1_010100019264: Triosephosphate isomerase (EC 5.3.1.1)
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_05216: Triosephosphate isomerase (EC 5.3.1.1)
 
Clostridium nexile DSM 1787

Gene: CLONEX_03005: Triosephosphate isomerase (EC 5.3.1.1)
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_01406: Triosephosphate isomerase (EC 5.3.1.1)
 
Dorea formicigenerans ATCC 27755

Gene: DORFOR_01433: Triosephosphate isomerase (EC 5.3.1.1)
 
Dorea longicatena DSM 13814

Gene: DORLON_02435: Triosephosphate isomerase (EC 5.3.1.1)
*
Eubacterium eligens ATCC 27750

Site:
position = -144
score = 5.26629
sequence = TTGTTATTTATTTCACAA

Gene: EUBELI_01188: Triosephosphate isomerase (EC 5.3.1.1)
 
Eubacterium rectale ATCC 33656

Gene: EUBREC_1524: Triosephosphate isomerase (EC 5.3.1.1)
 
Roseburia intestinalis L1-82

Gene: ROSINTL182_01944: Triosephosphate isomerase (EC 5.3.1.1)
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_01758: Triosephosphate isomerase (EC 5.3.1.1)
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_01920: Triosephosphate isomerase (EC 5.3.1.1)
Triosephosphate isomerase (EC 5.3.1.1)
pgm
 
Bacteroides pectinophilus ATCC 43243

Gene: BACPEC_01593: Phosphoglycerate mutase (EC 5.4.2.1)
 
Blautia hansenii DSM 20583

Gene: BLAHAN_03003: Phosphoglycerate mutase (EC 5.4.2.1)
 
Bryantella formatexigens DSM 14469

Gene: BRYFOR_04617: Phosphoglycerate mutase (EC 5.4.2.1)
 
Clostridiales bacterium 1_7_47_FAA

Gene: Cbac1_010100019269: Phosphoglycerate mutase (EC 5.4.2.1)
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_05217: Phosphoglycerate mutase (EC 5.4.2.1)
 
Clostridium nexile DSM 1787

Gene: CLONEX_03003: Phosphoglycerate mutase (EC 5.4.2.1)
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_01408: Phosphoglycerate mutase (EC 5.4.2.1)
 
Dorea formicigenerans ATCC 27755

Gene: DORFOR_01435: Phosphoglycerate mutase (EC 5.4.2.1)
 
Dorea longicatena DSM 13814

Gene: DORLON_02434: Phosphoglycerate mutase (EC 5.4.2.1)
 
Eubacterium eligens ATCC 27750

Gene: EUBELI_01187: Phosphoglycerate mutase (EC 5.4.2.1)
 
Eubacterium rectale ATCC 33656

Gene: EUBREC_1525: Phosphoglycerate mutase (EC 5.4.2.1)
 
Roseburia intestinalis L1-82

Gene: ROSINTL182_01881: Phosphoglycerate mutase (EC 5.4.2.1)
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_01941: Phosphoglycerate mutase (EC 5.4.2.1)
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_01928: Phosphoglycerate mutase (EC 5.4.2.1)
Phosphoglycerate mutase (EC 5.4.2.1)
 
CRON 10.
bdh
*
Bacteroides pectinophilus ATCC 43243

Site:
position = -43
score = 5.14125
sequence = ATGATAAAAAATTAACGA

Gene: BACPEC_03060: Butanol dehydrogenase; Butyraldehyde dehydrogenase
*
Blautia hansenii DSM 20583

Site:
position = -65
score = 4.84279
sequence = TCGTTAAAAAAATAACGT

Site:
position = -51
score = 5.0083
sequence = ACGTTAAAAAAATAACAT

Gene: BLAHAN_03194: Butanol dehydrogenase; Butyraldehyde dehydrogenase
 
Bryantella formatexigens DSM 14469
*
Clostridiales bacterium 1_7_47_FAA

Site:
position = -54
score = 5.18004
sequence = TTGTTAAAGAAATAACAA

Gene: Cbac1_010100015703: Butanol dehydrogenase; Butyraldehyde dehydrogenase
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_01144: Butanol dehydrogenase; Butyraldehyde dehydrogenase
*
Clostridium nexile DSM 1787

Site:
position = -71
score = 4.63422
sequence = GCGTTAAATAATTAACAG

Site:
position = -43
score = 4.5185
sequence = CTGTTAAAAGGTTAACAA

Gene: CLONEX_01601: Butanol dehydrogenase; Butyraldehyde dehydrogenase
 
Clostridium scindens ATCC 35704
*
Dorea formicigenerans ATCC 27755

Site:
position = -76
score = 4.88058
sequence = GCGTTAAATTATTATCAA

Site:
position = -43
score = 4.53452
sequence = GTGATAAAAATTTAACGC

Gene: DORFOR_01493: Butanol dehydrogenase; Butyraldehyde dehydrogenase
*
Dorea longicatena DSM 13814

Site:
position = -110
score = 4.52315
sequence = ATATTAAAAAAATCACAA

Site:
position = -44
score = 4.5327
sequence = GTGTTAAAAGATTAACAC

Gene: DORLON_00585: Butanol dehydrogenase; Butyraldehyde dehydrogenase
*
Eubacterium eligens ATCC 27750

Site:
position = -28
score = 5.40832
sequence = TTGTTTATAATTTAACAA

Gene: EUBELI_02006: Butanol dehydrogenase; Butyraldehyde dehydrogenase
 
Eubacterium rectale ATCC 33656

Gene: EUBREC_2225: Butanol dehydrogenase; Butyraldehyde dehydrogenase
*
Roseburia intestinalis L1-82

Site:
position = -125
score = 5.58132
sequence = TTGTTATTTAATTAACAA

Gene: ROSINTL182_03172: Butanol dehydrogenase; Butyraldehyde dehydrogenase
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_00563: Butanol dehydrogenase; Butyraldehyde dehydrogenase
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_02095: Butanol dehydrogenase; Butyraldehyde dehydrogenase
Butanol dehydrogenase; Butyraldehyde dehydrogenase
 
CRON 11.
adhE
*
Bacteroides pectinophilus ATCC 43243

Site:
position = -48
score = 5.48434
sequence = TTGTTAAAATATTAACGA

Gene: BACPEC_02251: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469
*
Clostridiales bacterium 1_7_47_FAA

Site:
position = -92
score = 4.86975
sequence = TTGACATATTTTTAACGA

Site:
position = -50
score = 5.55211
sequence = TTGTTAATTAATTATCAA

Gene: Cbac1_010100020622: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
*
Clostridium bolteae ATCC BAA-613

Site:
position = -135
score = 4.79299
sequence = TTGACATTTTTTTAACGA

Site:
position = -93
score = 5.55211
sequence = TTGTTAATTAATTATCAA

Gene: CLOBOL_06541: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
*
Clostridium nexile DSM 1787

Site:
position = -73
score = 5.01701
sequence = TTGACAAATATTTAACGA

Gene: CLONEX_04092: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
*
Clostridium scindens ATCC 35704

Site:
position = -54
score = 5.48162
sequence = TTGTTAAAAAAATATCAA

Site:
position = -29
score = 5.26793
sequence = TTGACAAATAATTAACAA

Gene: CLOSCI_02188: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
*
Dorea formicigenerans ATCC 27755

Site:
position = -150
score = 5.06746
sequence = ATGATAAAAAATAAACAA

Site:
position = -130
score = 5.15729
sequence = ATGTTAAAAAAATATCAT

Site:
position = -105
score = 4.94025
sequence = TTGACAAATAATTAACGA

Gene: DORFOR_01318: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
*
Dorea longicatena DSM 13814

Site:
position = -117
score = 5.31945
sequence = ATGTTAAAAAAATATCAA

Site:
position = -97
score = 4.92766
sequence = ATGTGAAAAAAATATCAA

Site:
position = -72
score = 4.78988
sequence = TTGACAAAGAATTAACAA

Gene: DORLON_02221: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
*
Eubacterium eligens ATCC 27750

Site:
position = -54
score = 5.6311
sequence = TTGTTAAATTATTATCAA

Gene: EUBELI_02054: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
 
Eubacterium rectale ATCC 33656
 
Roseburia intestinalis L1-82
*
Ruminococcus gnavus ATCC 29149

Site:
position = -116
score = 4.57128
sequence = ATGTTAAAAAGATAACGT

Site:
position = -102
score = 4.85485
sequence = ACGTTAAATATTTGTCAA

Site:
position = -76
score = 5.26793
sequence = TTGACAATTATTTAACAA

Gene: RUMGNA_02651: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
*
Ruminococcus lactaris ATCC 29176

Site:
position = -63
score = 5.38696
sequence = GTGTTAAATTATTAACAA

Site:
position = -37
score = 4.86571
sequence = TTGACAATTTATTAACGA

Gene: RUMLAC_02580: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
stpK
 
Bacteroides pectinophilus ATCC 43243

Gene: BACPEC_02252: Mn2+-dependent serine/threonine protein kinase
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469
*
Clostridiales bacterium 1_7_47_FAA

Site:
position = -119
score = 5.21801
sequence = ACGTTAAAAATTTATCAA

Gene: Cbac1_010100013906: Mn2+-dependent serine/threonine protein kinase
*
Clostridium bolteae ATCC BAA-613

Site:
position = -119
score = 5.21801
sequence = ACGTTAAAAATTTATCAA

Gene: CLOBOL_00811: Mn2+-dependent serine/threonine protein kinase
*
Clostridium nexile DSM 1787

Site:
position = -102
score = 4.83783
sequence = TTGTTAAAAAATACTCAA

Gene: CLONEX_04091: Mn2+-dependent serine/threonine protein kinase
*
Clostridium scindens ATCC 35704

Site:
position = -107
score = 5.57269
sequence = ATGTTAAATATATAACAA

Site:
position = -69
score = 4.97953
sequence = AAGTTAAAAAAATATCAA

Gene: CLOSCI_02187: Mn2+-dependent serine/threonine protein kinase
 
Dorea formicigenerans ATCC 27755

Gene: DORFOR_01317: Mn2+-dependent serine/threonine protein kinase
*
Dorea longicatena DSM 13814

Site:
position = -144
score = 5.49815
sequence = ATGTTAAAAAAATAACAA

Site:
position = -106
score = 4.7499
sequence = TAGTGAAAAAAATATCAA

Gene: DORLON_02222: Mn2+-dependent serine/threonine protein kinase
 
Eubacterium eligens ATCC 27750

Gene: EUBELI_02055: Mn2+-dependent serine/threonine protein kinase
 
Eubacterium rectale ATCC 33656
 
Roseburia intestinalis L1-82
*
Ruminococcus gnavus ATCC 29149

Site:
position = -181
score = 4.79392
sequence = AAGTTAAGAAATTAACAA

Gene: RUMGNA_02650: Mn2+-dependent serine/threonine protein kinase
*
Ruminococcus lactaris ATCC 29176

Site:
position = -157
score = 5.49815
sequence = ATGTTAAAAAAATAACAA

Gene: RUMLAC_02581: Mn2+-dependent serine/threonine protein kinase
Mn2+-dependent serine/threonine protein kinase
 
CRON 12.
COG183
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469
 
Clostridiales bacterium 1_7_47_FAA
 
Clostridium bolteae ATCC BAA-613
 
Clostridium nexile DSM 1787
 
Clostridium scindens ATCC 35704
 
Dorea formicigenerans ATCC 27755
 
Dorea longicatena DSM 13814
 
Eubacterium eligens ATCC 27750
*
Eubacterium rectale ATCC 33656

Site:
position = -111
score = 5.27015
sequence = TTGACAAATTATTAACAA

Site:
position = -54
score = 5.38696
sequence = TTGTTAAAAAATTAACAG

Gene: EUBREC_0733: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
*
Roseburia intestinalis L1-82

Site:
position = -82
score = 5.38696
sequence = TTGTTAAAAAATTAACAG

Gene: ROSINTL182_02619: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
 
Ruminococcus gnavus ATCC 29149
 
Ruminococcus lactaris ATCC 29176
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
 
CRON 13.
COG1959
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583

Gene: BLAHAN_03210: Predicted transcriptional regulator, Rrf2 family
 
Bryantella formatexigens DSM 14469
*
Clostridiales bacterium 1_7_47_FAA

Site:
position = -34
score = 5.2568
sequence = TTGTTATATCTTTAACAA

Gene: Cbac1_010100004767: Predicted transcriptional regulator, Rrf2 family
*
Clostridium bolteae ATCC BAA-613

Site:
position = -33
score = 5.3506
sequence = TTGTTACAATTTTAACAA

Gene: CLOBOL_02457: Predicted transcriptional regulator, Rrf2 family
 
Clostridium nexile DSM 1787

Gene: CLONEX_02580: Predicted transcriptional regulator, Rrf2 family
 
Clostridium scindens ATCC 35704
 
Dorea formicigenerans ATCC 27755
 
Dorea longicatena DSM 13814
 
Eubacterium eligens ATCC 27750
 
Eubacterium rectale ATCC 33656
 
Roseburia intestinalis L1-82
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_01768: Predicted transcriptional regulator, Rrf2 family
 
Ruminococcus lactaris ATCC 29176
Predicted transcriptional regulator, Rrf2 family
 
CRON 14.
asrA
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469
*
Clostridiales bacterium 1_7_47_FAA

Site:
position = -134
score = 4.62163
sequence = ATGATAAATTTTTATTAT

Site:
position = -76
score = 5.3509
sequence = TTGTTATAATAATAACAT

Gene: Cbac1_010100025357: anaerobic sulfite reductase, A subunit
*
Clostridium bolteae ATCC BAA-613

Site:
position = -133
score = 4.62163
sequence = ATGATAAAAATTTATTAT

Site:
position = -75
score = 5.3509
sequence = TTGTTATAATAATAACAT

Gene: CLOBOL_00463: anaerobic sulfite reductase, A subunit
 
Clostridium nexile DSM 1787
 
Clostridium scindens ATCC 35704
 
Dorea formicigenerans ATCC 27755
 
Dorea longicatena DSM 13814
 
Eubacterium eligens ATCC 27750
 
Eubacterium rectale ATCC 33656
 
Roseburia intestinalis L1-82
 
Ruminococcus gnavus ATCC 29149
 
Ruminococcus lactaris ATCC 29176
anaerobic sulfite reductase, A subunit
asrB
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469
 
Clostridiales bacterium 1_7_47_FAA

Gene: Cbac1_010100025362: anaerobic sulfite reductase subunit B
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_00462: anaerobic sulfite reductase subunit B
 
Clostridium nexile DSM 1787
 
Clostridium scindens ATCC 35704
 
Dorea formicigenerans ATCC 27755
 
Dorea longicatena DSM 13814
 
Eubacterium eligens ATCC 27750
 
Eubacterium rectale ATCC 33656
 
Roseburia intestinalis L1-82
 
Ruminococcus gnavus ATCC 29149
 
Ruminococcus lactaris ATCC 29176
anaerobic sulfite reductase subunit B
asrC
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469
 
Clostridiales bacterium 1_7_47_FAA

Gene: Cbac1_010100025367: anaerobic sulfite reductase subunit C
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_00461: anaerobic sulfite reductase subunit C
 
Clostridium nexile DSM 1787
 
Clostridium scindens ATCC 35704
 
Dorea formicigenerans ATCC 27755
 
Dorea longicatena DSM 13814
 
Eubacterium eligens ATCC 27750
 
Eubacterium rectale ATCC 33656
 
Roseburia intestinalis L1-82
 
Ruminococcus gnavus ATCC 29149
 
Ruminococcus lactaris ATCC 29176
anaerobic sulfite reductase subunit C
 
CRON 15.
pfkA
 
Bacteroides pectinophilus ATCC 43243

Gene: BACPEC_03023: 6-phosphofructokinase (EC 2.7.1.11)
 
Blautia hansenii DSM 20583

Gene: BLAHAN_00119: 6-phosphofructokinase (EC 2.7.1.11)
 
Bryantella formatexigens DSM 14469

Gene: BRYFOR_03235: 6-phosphofructokinase (EC 2.7.1.11)
 
Clostridiales bacterium 1_7_47_FAA

Gene: Cbac1_010100001775: 6-phosphofructokinase (EC 2.7.1.11)
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_04803: 6-phosphofructokinase (EC 2.7.1.11)
 
Clostridium nexile DSM 1787

Gene: CLONEX_02545: 6-phosphofructokinase (EC 2.7.1.11)
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_03116: 6-phosphofructokinase (EC 2.7.1.11)
 
Dorea formicigenerans ATCC 27755

Gene: DORFOR_01824: 6-phosphofructokinase (EC 2.7.1.11)
 
Dorea longicatena DSM 13814

Gene: DORLON_01273: 6-phosphofructokinase (EC 2.7.1.11)
*
Eubacterium eligens ATCC 27750

Site:
position = -93
score = 5.08559
sequence = TTGGTAAAAAATTATCAA

Gene: EUBELI_01680: 6-phosphofructokinase (EC 2.7.1.11)
*
Eubacterium rectale ATCC 33656

Site:
position = -18
score = 5.30677
sequence = ATGATAATTTTTTAACAT

Gene: EUBREC_1058: 6-phosphofructokinase (EC 2.7.1.11)
 
Roseburia intestinalis L1-82

Gene: ROSINTL182_02777: 6-phosphofructokinase (EC 2.7.1.11)
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_01346: 6-phosphofructokinase (EC 2.7.1.11)
*2
Ruminococcus lactaris ATCC 29176

Site:
position = -61
score = 4.86868
sequence = TTGATAAAAAATAGACAA

Gene: RUMLAC_02728: 6-phosphofructokinase (EC 2.7.1.11)

Gene: RUMLAC_00699: 6-phosphofructokinase (EC 2.7.1.11)
6-phosphofructokinase (EC 2.7.1.11)
 
CRON 16.
pflB
*
Bacteroides pectinophilus ATCC 43243

Site:
position = -128
score = 5.23458
sequence = TTGTTGATTTTTTAACAA

Gene: BACPEC_03240: Pyruvate formate-lyase (EC 2.3.1.54)
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469
 
Clostridiales bacterium 1_7_47_FAA
 
Clostridium bolteae ATCC BAA-613
 
Clostridium nexile DSM 1787
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_00725: Pyruvate formate-lyase (EC 2.3.1.54)
*
Dorea formicigenerans ATCC 27755

Site:
position = -160
score = 5.01742
sequence = TTGTCAATAGTTTAACAA

Gene: DORFOR_01508: Pyruvate formate-lyase (EC 2.3.1.54)
 
Dorea longicatena DSM 13814

Gene: DORLON_00721: Pyruvate formate-lyase (EC 2.3.1.54)
 
Eubacterium eligens ATCC 27750

Gene: EUBELI_20055: Pyruvate formate-lyase (EC 2.3.1.54)
 
Eubacterium rectale ATCC 33656

Gene: EUBREC_0469: Pyruvate formate-lyase (EC 2.3.1.54)
 
Roseburia intestinalis L1-82
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_02002: Pyruvate formate-lyase (EC 2.3.1.54)
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_02815: Pyruvate formate-lyase (EC 2.3.1.54)
Pyruvate formate-lyase (EC 2.3.1.54)
 
CRON 17.
cat2
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469
 
Clostridiales bacterium 1_7_47_FAA
 
Clostridium bolteae ATCC BAA-613
 
Clostridium nexile DSM 1787
 
Clostridium scindens ATCC 35704
 
Dorea formicigenerans ATCC 27755
 
Dorea longicatena DSM 13814
 
Eubacterium eligens ATCC 27750
*
Eubacterium rectale ATCC 33656

Site:
position = -60
score = 5.17047
sequence = TTGTTATTTTTTTAACGT

Gene: EUBREC_3075: 4-hydroxybutyrate:acetyl-CoA CoA transferase (EC 2.3.1.-)
*
Roseburia intestinalis L1-82

Site:
position = -30
score = 5.17889
sequence = ATGGTAAATTTTTAACAA

Gene: ROSINTL182_02872: 4-hydroxybutyrate:acetyl-CoA CoA transferase (EC 2.3.1.-)
 
Ruminococcus gnavus ATCC 29149
 
Ruminococcus lactaris ATCC 29176
4-hydroxybutyrate:acetyl-CoA CoA transferase (EC 2.3.1.-)
 
CRON 18.
crt
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469
 
Clostridiales bacterium 1_7_47_FAA
 
Clostridium bolteae ATCC BAA-613
 
Clostridium nexile DSM 1787
 
Clostridium scindens ATCC 35704
 
Dorea formicigenerans ATCC 27755
 
Dorea longicatena DSM 13814
 
Eubacterium eligens ATCC 27750
*
Eubacterium rectale ATCC 33656

Site:
position = -91
score = 4.80728
sequence = TTGACAAAAATTTGTCAA

Gene: EUBREC_1017: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
*
Roseburia intestinalis L1-82

Site:
position = -41
score = 5.6311
sequence = TTGTTAATTTTTTATCAA

Gene: ROSINTL182_00883: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
 
Ruminococcus gnavus ATCC 29149
 
Ruminococcus lactaris ATCC 29176
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
 
CRON 19.
nadA
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583

Gene: BLAHAN_02639: Quinolinate synthetase (EC 4.1.99.-)
 
Bryantella formatexigens DSM 14469
 
Clostridiales bacterium 1_7_47_FAA
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_03914: Quinolinate synthetase (EC 4.1.99.-)
 
Clostridium nexile DSM 1787

Gene: CLONEX_03264: Quinolinate synthetase (EC 4.1.99.-)
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_01553: Quinolinate synthetase (EC 4.1.99.-)
 
Dorea formicigenerans ATCC 27755

Gene: DORFOR_01504: Quinolinate synthetase (EC 4.1.99.-)
 
Dorea longicatena DSM 13814

Gene: DORLON_00278: Quinolinate synthetase (EC 4.1.99.-)
 
Eubacterium eligens ATCC 27750

Gene: EUBELI_01431: Quinolinate synthetase (EC 4.1.99.-)
 
Eubacterium rectale ATCC 33656

Gene: EUBREC_1033: Quinolinate synthetase (EC 4.1.99.-)
 
Roseburia intestinalis L1-82

Gene: ROSINTL182_03918: Quinolinate synthetase (EC 4.1.99.-)
*
Ruminococcus gnavus ATCC 29149

Site:
position = -43
score = 5.21801
sequence = ACGATAAAAATTTAACAA

Gene: RUMGNA_03804: Quinolinate synthetase (EC 4.1.99.-)
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_00642: Quinolinate synthetase (EC 4.1.99.-)
Quinolinate synthetase (EC 4.1.99.-)
nadB
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583

Gene: BLAHAN_02638: L-aspartate oxidase (EC 1.4.3.16)
 
Bryantella formatexigens DSM 14469
 
Clostridiales bacterium 1_7_47_FAA
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_03915: L-aspartate oxidase (EC 1.4.3.16)
 
Clostridium nexile DSM 1787

Gene: CLONEX_03263: L-aspartate oxidase (EC 1.4.3.16)
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_01552: L-aspartate oxidase (EC 1.4.3.16)
 
Dorea formicigenerans ATCC 27755

Gene: DORFOR_01505: L-aspartate oxidase (EC 1.4.3.16)
 
Dorea longicatena DSM 13814

Gene: DORLON_01089: L-aspartate oxidase (EC 1.4.3.16)
 
Eubacterium eligens ATCC 27750

Gene: EUBELI_01430: L-aspartate oxidase (EC 1.4.3.16)
 
Eubacterium rectale ATCC 33656

Gene: EUBREC_1034: L-aspartate oxidase (EC 1.4.3.16)
 
Roseburia intestinalis L1-82

Gene: ROSINTL182_03919: L-aspartate oxidase (EC 1.4.3.16)
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_03805: L-aspartate oxidase (EC 1.4.3.16)
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_00641: L-aspartate oxidase (EC 1.4.3.16)
L-aspartate oxidase (EC 1.4.3.16)
nadC
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583

Gene: BLAHAN_02635: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
 
Bryantella formatexigens DSM 14469
 
Clostridiales bacterium 1_7_47_FAA
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_03916: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
 
Clostridium nexile DSM 1787

Gene: CLONEX_03262: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_01551: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
 
Dorea formicigenerans ATCC 27755

Gene: DORFOR_01506: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
 
Dorea longicatena DSM 13814

Gene: DORLON_01088: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
 
Eubacterium eligens ATCC 27750

Gene: EUBELI_01429: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
 
Eubacterium rectale ATCC 33656

Gene: EUBREC_1035: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
 
Roseburia intestinalis L1-82

Gene: ROSINTL182_03920: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_03806: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_00640: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
niaR
 
Bacteroides pectinophilus ATCC 43243

Gene: BACPEC_00422: NAD biosynthesis transcription regulator, HTH_11 family
 
Blautia hansenii DSM 20583

Gene: BLAHAN_02634: NAD biosynthesis transcription regulator, HTH_11 family
 
Bryantella formatexigens DSM 14469
 
Clostridiales bacterium 1_7_47_FAA

Gene: Cbac1_010100010440: NAD biosynthesis transcription regulator, HTH_11 family
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_03917: NAD biosynthesis transcription regulator, HTH_11 family
 
Clostridium nexile DSM 1787

Gene: CLONEX_03261: NAD biosynthesis transcription regulator, HTH_11 family
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_01550: NAD biosynthesis transcription regulator, HTH_11 family
 
Dorea formicigenerans ATCC 27755
 
Dorea longicatena DSM 13814

Gene: DORLON_01087: NAD biosynthesis transcription regulator, HTH_11 family
 
Eubacterium eligens ATCC 27750

Gene: EUBELI_01428: NAD biosynthesis transcription regulator, HTH_11 family
 
Eubacterium rectale ATCC 33656

Gene: EUBREC_1036: NAD biosynthesis transcription regulator, HTH_11 family
 
Roseburia intestinalis L1-82

Gene: ROSINTL182_03921: NAD biosynthesis transcription regulator, HTH_11 family
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_03807: NAD biosynthesis transcription regulator, HTH_11 family
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_00639: NAD biosynthesis transcription regulator, HTH_11 family
NAD biosynthesis transcription regulator, HTH_11 family
 
CRON 20.
rex
*
Bacteroides pectinophilus ATCC 43243

Site:
position = -69
score = 4.35819
sequence = TTGACATGATTTTAACGA

Site:
position = 7
score = 4.39024
sequence = GCGATAAAAAAATATCAT

Gene: BACPEC_01011: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
*
Blautia hansenii DSM 20583

Site:
position = -40
score = 4.7192
sequence = TTGACTTTAATTTAACAA

Gene: BLAHAN_02340: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
*
Bryantella formatexigens DSM 14469

Site:
position = -59
score = 4.56671
sequence = TTGACATTTTTTTCACAT

Gene: BRYFOR_02286: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
*
Clostridiales bacterium 1_7_47_FAA

Site:
position = -77
score = 4.3369
sequence = TTGACATTTTTTTGACAC

Gene: Cbac1_010100026274: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
*
Clostridium bolteae ATCC BAA-613

Site:
position = -79
score = 4.26988
sequence = TTGACATTTTTTTGACGT

Gene: CLOBOL_04148: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
 
Clostridium nexile DSM 1787

Gene: CLONEX_01590: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_00613: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
 
Dorea formicigenerans ATCC 27755

Gene: DORFOR_01483: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
 
Dorea longicatena DSM 13814

Gene: DORLON_00639: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
*
Eubacterium eligens ATCC 27750

Site:
position = -114
score = 4.80784
sequence = TGGTTAAAATTTTGACAT

Gene: EUBELI_01381: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
*
Eubacterium rectale ATCC 33656

Site:
position = -225
score = 4.78777
sequence = ATGTTAAATTCTTAACAC

Gene: EUBREC_1967: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
*
Roseburia intestinalis L1-82

Site:
position = -69
score = 4.73201
sequence = TAGTTAAAAATTTCACAC

Gene: ROSINTL182_04859: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_00579: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
 
Ruminococcus lactaris ATCC 29176

Gene: RUMLAC_02084: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
 
CRON 21.
por
*
Bacteroides pectinophilus ATCC 43243

Site:
position = -158
score = 4.43521
sequence = TTGACAAAGGTTTAACAA

Gene: BACPEC_01494: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Blautia hansenii DSM 20583

Gene: BLAHAN_03209: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Bryantella formatexigens DSM 14469

Gene: BRYFOR_01924: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 2
Clostridiales bacterium 1_7_47_FAA

Gene: Cbac1_010100006533: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)

Gene: Cbac1_010100001915: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Clostridium bolteae ATCC BAA-613

Gene: CLOBOL_01920: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Clostridium nexile DSM 1787

Gene: CLONEX_03662: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Clostridium scindens ATCC 35704

Gene: CLOSCI_01585: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
*
Dorea formicigenerans ATCC 27755

Site:
position = -133
score = 4.76523
sequence = TCGTTAATTTTGTATCAA

Gene: DORFOR_02415: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Dorea longicatena DSM 13814

Gene: DORLON_01144: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Eubacterium eligens ATCC 27750

Gene: EUBELI_00741: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Eubacterium rectale ATCC 33656

Gene: EUBREC_1472: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Roseburia intestinalis L1-82

Gene: ROSINTL182_01855: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Ruminococcus gnavus ATCC 29149

Gene: RUMGNA_03464: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
*
Ruminococcus lactaris ATCC 29176

Site:
position = -179
score = 5.07714
sequence = TTGTGAAAAAATTATCAT

Gene: RUMLAC_01487: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
CRON 22.
nadO
 
Bacteroides pectinophilus ATCC 43243
 
Blautia hansenii DSM 20583
 
Bryantella formatexigens DSM 14469
*
Clostridiales bacterium 1_7_47_FAA

Site:
position = -67
score = 5.29378
sequence = TTGTTAATTAGTTAACAA

Gene: Cbac1_010100004252: NADH oxidase
 
Clostridium bolteae ATCC BAA-613
 
Clostridium nexile DSM 1787
 
Clostridium scindens ATCC 35704
 
Dorea formicigenerans ATCC 27755
 
Dorea longicatena DSM 13814
 
Eubacterium eligens ATCC 27750
 
Eubacterium rectale ATCC 33656
 
Roseburia intestinalis L1-82
 
Ruminococcus gnavus ATCC 29149
 
Ruminococcus lactaris ATCC 29176
NADH oxidase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulatory Sites [ FASTA format ] DOWNLOAD