Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog AgaR2 - Enterobacteriales

Properties
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: N-acetylgalactosamine utilization
Effector: Galactosamine-6-phosphate; N-acetylgalactosamine-6-phosphate
Phylum: Proteobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Serratia proteamaculans 568 9 2
Edwardsiella tarda EIB202 5 1
Photorhabdus luminescens subsp. laumondii TTO1 9 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
agaR
*2
Serratia proteamaculans 568

Site:
position = -165
score = 7.29833
sequence = TTTTCA-(13)-CGAAAG

Gene: Spro_3849: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family

Site:
position = -201
score = 8.23278
sequence = CTTTCG-(13)-CGAAAG

Gene: Spro_2577: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
*
Edwardsiella tarda EIB202

Site:
position = -157
score = 8.23278
sequence = CTTTCG-(13)-CGAAAG

Gene: ETAE_0677: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
*
Photorhabdus luminescens subsp. laumondii TTO1

Site:
position = -176
score = 7.77337
sequence = CTTTCG-(13)-CGAAAC

Gene: plu0832: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
agaZ
 
Serratia proteamaculans 568

Gene: Spro_3848: Tagatose-6-phosphate kinase (EC 2.7.1.144)
 
Edwardsiella tarda EIB202
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu0833: Tagatose-6-phosphate kinase (EC 2.7.1.144)
Tagatose-6-phosphate kinase (EC 2.7.1.144)
agaS
 
Serratia proteamaculans 568

Gene: Spro_2578: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
 
Edwardsiella tarda EIB202

Gene: ETAE_0678: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu0834: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
agaB-II
 
Serratia proteamaculans 568

Gene: Spro_3847: PTS system, predicted galactosamine-specific IIB component (EC 2.7.1.69)
 
Edwardsiella tarda EIB202

Gene: ETAE_0679: PTS system, predicted galactosamine-specific IIB component (EC 2.7.1.69)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu0835: PTS system, predicted galactosamine-specific IIB component (EC 2.7.1.69)
PTS system, predicted galactosamine-specific IIB component (EC 2.7.1.69)
agaC-II
 
Serratia proteamaculans 568

Gene: Spro_3846: PTS system, predicted galactosamine-specific IIC component (EC 2.7.1.69)
 
Edwardsiella tarda EIB202

Gene: ETAE_0680: PTS system, predicted galactosamine-specific IIC component (EC 2.7.1.69)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu0836: PTS system, predicted galactosamine-specific IIC component (EC 2.7.1.69)
PTS system, predicted galactosamine-specific IIC component (EC 2.7.1.69)
agaD-II
 
Serratia proteamaculans 568

Gene: Spro_3845: PTS system, predicted galactosamine-specific IID component (EC 2.7.1.69)
 
Edwardsiella tarda EIB202

Gene: ETAE_0681: PTS system, predicted galactosamine-specific IID component (EC 2.7.1.69)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu0837: PTS system, predicted galactosamine-specific IID component (EC 2.7.1.69)
PTS system, predicted galactosamine-specific IID component (EC 2.7.1.69)
agaF-II
 
Serratia proteamaculans 568

Gene: Spro_3844: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
 
Edwardsiella tarda EIB202
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu0838: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
agaY
 
Serratia proteamaculans 568

Gene: Spro_2579: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
 
Edwardsiella tarda EIB202

Gene: ETAE_2526: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu0839: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
agaH
 
Serratia proteamaculans 568
 
Edwardsiella tarda EIB202
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu0840: Predicted secreted ?-N-acetylgalactosaminidase (EC 3.2.1.49), GH36 family
Predicted secreted ?-N-acetylgalactosaminidase (EC 3.2.1.49), GH36 family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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