Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog UxuR - Streptococcaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Glucuronate utilization
Effector: Glucuronate
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Lactococcus lactis subsp. cremoris SK11 8 2
Lactococcus lactis subsp. lactis Il1403 8 2
Streptococcus agalactiae 2603V/R
Streptococcus dysgalactiae subsp. equisimilis GGS_124
Streptococcus equi subsp. zooepidemicus MGCS10565
Streptococcus gallolyticus UCN34
Streptococcus gordonii str. Challis substr. CH1
Streptococcus mitis B6
Streptococcus mutans UA159
Streptococcus pneumoniae TIGR4
Streptococcus pyogenes M1 GAS
Streptococcus sanguinis SK36
Streptococcus suis 05ZYH33
Streptococcus thermophilus CNRZ1066
Streptococcus uberis 0140J
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
uxuB
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -36
score = 7.02942
sequence = AAACTGATATATCACTTT

Gene: LACR_1746: D-mannonate oxidoreductase (EC 1.1.1.57)
*
Lactococcus lactis subsp. lactis Il1403

Site:
position = -39
score = 7.02942
sequence = AAACTGATATATCACTTT

Gene: L0241: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Streptococcus agalactiae 2603V/R
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gallolyticus UCN34
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
 
Streptococcus mutans UA159
 
Streptococcus pneumoniae TIGR4
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus suis 05ZYH33
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus uberis 0140J
D-mannonate oxidoreductase (EC 1.1.1.57)
uxuA
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1745: Mannonate dehydratase (EC 4.2.1.8)
 
Lactococcus lactis subsp. lactis Il1403

Gene: L0020: Mannonate dehydratase (EC 4.2.1.8)
 
Streptococcus agalactiae 2603V/R
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gallolyticus UCN34
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
 
Streptococcus mutans UA159
 
Streptococcus pneumoniae TIGR4
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus suis 05ZYH33
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus uberis 0140J
Mannonate dehydratase (EC 4.2.1.8)
uxuT
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1744: Predicted oligogalacturonide transporter
 
Lactococcus lactis subsp. lactis Il1403

Gene: L0023: Predicted oligogalacturonide transporter
 
Streptococcus agalactiae 2603V/R
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gallolyticus UCN34
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
 
Streptococcus mutans UA159
 
Streptococcus pneumoniae TIGR4
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus suis 05ZYH33
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus uberis 0140J
Predicted oligogalacturonide transporter
yqhA
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1743: Predicted aldose epimerase
 
Lactococcus lactis subsp. lactis Il1403

Gene: L74167: Predicted aldose epimerase
 
Streptococcus agalactiae 2603V/R
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gallolyticus UCN34
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
 
Streptococcus mutans UA159
 
Streptococcus pneumoniae TIGR4
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus suis 05ZYH33
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus uberis 0140J
Predicted aldose epimerase
uxaC
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1742: Uronate isomerase (EC 5.3.1.12)
 
Lactococcus lactis subsp. lactis Il1403

Gene: L0019: Uronate isomerase (EC 5.3.1.12)
 
Streptococcus agalactiae 2603V/R
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gallolyticus UCN34
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
 
Streptococcus mutans UA159
 
Streptococcus pneumoniae TIGR4
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus suis 05ZYH33
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus uberis 0140J
Uronate isomerase (EC 5.3.1.12)
kdgK
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1741: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
 
Lactococcus lactis subsp. lactis Il1403

Gene: L0021: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
 
Streptococcus agalactiae 2603V/R
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gallolyticus UCN34
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
 
Streptococcus mutans UA159
 
Streptococcus pneumoniae TIGR4
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus suis 05ZYH33
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus uberis 0140J

Gene: SUB1602: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
kdgA
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1740: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Lactococcus lactis subsp. lactis Il1403

Gene: L0022: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Streptococcus agalactiae 2603V/R
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gallolyticus UCN34
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
 
Streptococcus mutans UA159
 
Streptococcus pneumoniae TIGR4
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus suis 05ZYH33
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus uberis 0140J

Gene: SUB1601: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
CRON 2.
uxuR
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -365
score = 7.02942
sequence = AAAGTGATATATCAGTTT

Gene: LACR_1747: Glucuronate utilization transcriptional regulator UxuR, GntR family
*
Lactococcus lactis subsp. lactis Il1403

Site:
position = -147
score = 7.02942
sequence = AAAGTGATATATCAGTTT

Gene: L0240: Glucuronate utilization transcriptional regulator UxuR, GntR family
 
Streptococcus agalactiae 2603V/R
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gallolyticus UCN34
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
 
Streptococcus mutans UA159
 
Streptococcus pneumoniae TIGR4
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus suis 05ZYH33
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus uberis 0140J
Glucuronate utilization transcriptional regulator UxuR, GntR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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