Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog CcpA - Clostridia-2

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Carbon catabolism; Carbohydrate metabolism
Effector: HPr, phosphocarrier protein
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 113 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Clostridium hiranonis DSM 13275 22 13
Clostridium difficile 630 123 59
Clostridium bartlettii DSM 16795 20 11
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rnfC
*
Clostridium hiranonis DSM 13275

Site:
position = -190
score = 3.61101
sequence = TAGAAACATATATCTT

Gene: CLOHIR_01952: Electron transport complex protein RnfC
*
Clostridium difficile 630

Site:
position = -184
score = 3.8408
sequence = ATGAAAAGGATTGTTT

Gene: CD1137: Electron transport complex protein RnfC
*
Clostridium bartlettii DSM 16795

Site:
position = -100
score = 3.66218
sequence = GATAAATAATTAACAA

Gene: CLOBAR_01505: Electron transport complex protein RnfC
Electron transport complex protein RnfC
rnfD
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_01953: Electron transport complex protein RnfD
 
Clostridium difficile 630

Gene: CD1138: Electron transport complex protein RnfD
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_01504: Electron transport complex protein RnfD
Electron transport complex protein RnfD
rnfG
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_01954: Electron transport complex protein RnfG
 
Clostridium difficile 630

Gene: CD1139: Electron transport complex protein RnfG
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_01503: Electron transport complex protein RnfG
Electron transport complex protein RnfG
rnfE
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_01955: Electron transport complex protein RnfE
 
Clostridium difficile 630

Gene: CD1140: Electron transport complex protein RnfE
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_01502: Electron transport complex protein RnfE
Electron transport complex protein RnfE
rnfA
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_01956: Electron transport complex protein RnfA
 
Clostridium difficile 630

Gene: CD1141: Electron transport complex protein RnfA
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_01501: Electron transport complex protein RnfA
Electron transport complex protein RnfA
rnfB
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_01957: Electron transport complex protein RnfB
 
Clostridium difficile 630

Gene: CD1142: Electron transport complex protein RnfB
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_01500: Electron transport complex protein RnfB
Electron transport complex protein RnfB
 
CRON 2.
hadA
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -11
score = 4.85451
sequence = AGGAAAACGTTATGCT

Gene: CD0395: Hydroxyproline dehydratase putative
 
Clostridium bartlettii DSM 16795
Hydroxyproline dehydratase putative
hadI
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD0396: Benzoyl-CoA reductase subunit BadG (EC 1.3.99.15)
 
Clostridium bartlettii DSM 16795
Benzoyl-CoA reductase subunit BadG (EC 1.3.99.15)
hadB
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD0397: Benzoyl-CoA reductase subunit BadE (EC 1.3.99.15)
 
Clostridium bartlettii DSM 16795
Benzoyl-CoA reductase subunit BadE (EC 1.3.99.15)
hadC
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD0398: Subunit of oxygen-sensitive 2-hydroxyisocaproyl-CoA dehydratase
 
Clostridium bartlettii DSM 16795
Subunit of oxygen-sensitive 2-hydroxyisocaproyl-CoA dehydratase
acdB
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD0399: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
 
Clostridium bartlettii DSM 16795
Butyryl-CoA dehydrogenase (EC 1.3.99.2)
etfB1
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD0400: Electron transfer flavoprotein, beta subunit
 
Clostridium bartlettii DSM 16795
Electron transfer flavoprotein, beta subunit
etfA1
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD0401: Electron transfer flavoprotein, alpha subunit
 
Clostridium bartlettii DSM 16795
Electron transfer flavoprotein, alpha subunit
 
CRON 3.
CD1536
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = 232
score = 4.25724
sequence = AAGAAAACGATTTTGT

Gene: CD1536: putative electron-transfer protein
 
Clostridium bartlettii DSM 16795
putative electron-transfer protein
aspB
*
Clostridium hiranonis DSM 13275

Site:
position = 232
score = 4.86012
sequence = AGGAAAACGATTTCGT

Gene: CLOHIR_01291: Pyridine nucleotide-disulphide oxidoreductase family protein
 
Clostridium difficile 630

Gene: CD1537: Pyridine nucleotide-disulphide oxidoreductase family protein
 
Clostridium bartlettii DSM 16795
Pyridine nucleotide-disulphide oxidoreductase family protein
 
CRON 4.
CD1768
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -51
score = 5.07594
sequence = GAGAAAAGGTTTTGTT

Gene: CD1768: hypothetical protein
 
Clostridium bartlettii DSM 16795
hypothetical protein
 
CRON 5.
CD1586
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = 112
score = 5.10434
sequence = TAGAAAAGGTTATCAT

Gene: CD1586: hypothetical protein
 
Clostridium bartlettii DSM 16795
hypothetical protein
CD1587
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD1587: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
 
Clostridium bartlettii DSM 16795
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
CD1588
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD1588: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
 
Clostridium bartlettii DSM 16795
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
 
CRON 6.
spoVS
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -143
score = 4.41326
sequence = AAATAAAGGTTTTCTT

Gene: CD1935: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_01875: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)
Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)
 
CRON 7.
CD1893
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -153
score = 4.30997
sequence = TAGAAATCGTTTAATT

Site:
position = -76
score = 5.06522
sequence = TATAAAACGTTTTCTT

Gene: CD1893: COG3760, similarity to aminoacyl-tRNA editing enzymes YbaK, ProX
 
Clostridium bartlettii DSM 16795
COG3760, similarity to aminoacyl-tRNA editing enzymes YbaK, ProX
 
CRON 8.
CD1385
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -110
score = 4.40318
sequence = AAGAAAGCGTTTTGAA

Gene: CD1385: Transporter
 
Clostridium bartlettii DSM 16795
Transporter
CD1386
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -146
score = 4.2291
sequence = AAGAAAAGATATTGTT

Gene: CD1386: Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)
 
Clostridium bartlettii DSM 16795
Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)
CD1387
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -127
score = 4.19471
sequence = AAGAACAGATTTTGCT

Site:
position = -55
score = 3.8618
sequence = TCGAAAAAAATAACTT

Gene: CD1387: Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)
 
Clostridium bartlettii DSM 16795
Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)
 
CRON 9.
CD1477
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -51
score = 4.66451
sequence = AAGATAACGATTGCTT

Gene: CD1477: hypothetical protein
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_02835: hypothetical protein
hypothetical protein
feoA1
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD1478: Ferrous iron transport protein A
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_02834: Ferrous iron transport protein A
Ferrous iron transport protein A
feoB1
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD1479: Ferrous iron transport protein B
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_02833: Ferrous iron transport protein B
Ferrous iron transport protein B
 
CRON 10.
spo0A
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -16
score = 3.88536
sequence = AAGAAGATGTTTTTTA

Site:
position = -41
score = 4.33111
sequence = TGTAAAAAGTTTAGTT

Site:
position = -134
score = 3.84699
sequence = ATTAAAAAATTTTATT

Gene: CD1214: Stage 0 sporulation two-component response regulator (Spo0A)
*
Clostridium bartlettii DSM 16795

Site:
position = -130
score = 3.91705
sequence = AGTAAATTGTATTCAT

Gene: CLOBAR_02247: Stage 0 sporulation two-component response regulator (Spo0A)
Stage 0 sporulation two-component response regulator (Spo0A)
 
CRON 11.
CD0530
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = 11
score = 4.13444
sequence = TAAAAAACATTTTATT

Site:
position = -79
score = 4.06643
sequence = AGGAAAACGTATTATA

Gene: CD0530: Membrane protein, putative
 
Clostridium bartlettii DSM 16795
Membrane protein, putative
CD0529
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD0529: Conserved protein
 
Clostridium bartlettii DSM 16795
Conserved protein
CD0528
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD0528: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
 
Clostridium bartlettii DSM 16795
N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
 
CRON 12.
gapN
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -75
score = 4.12108
sequence = AAAGAAATGTTTACAT

Site:
position = -123
score = 4.79517
sequence = AGAAAAACGTTAACTT

Gene: CD0580: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9)
 
Clostridium bartlettii DSM 16795
Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9)
 
CRON 13.
CD1321
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = 25
score = 4.76644
sequence = AGGAAATAGTTAACTT

Gene: CD1321: hypothetical protein
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_02153: hypothetical protein
hypothetical protein
dapG
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_01230: Aspartokinase (EC 2.7.2.4)
*
Clostridium difficile 630

Site:
position = -124
score = 4.10962
sequence = AGAAAAAGGATTTTTT

Gene: CD1322: Aspartokinase (EC 2.7.2.4)
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_02152: Aspartokinase (EC 2.7.2.4)
Aspartokinase (EC 2.7.2.4)
 
CRON 14.
eutH
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -75
score = 4.15179
sequence = GGGAAAACGATACCAA

Gene: CD0742: Ethanolamine permease
 
Clostridium bartlettii DSM 16795
Ethanolamine permease
 
CRON 15.
rbsR
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -27
score = 4.33882
sequence = AGTAAAACGGTTTCCT

Gene: CD0298: Ribose operon repressor
 
Clostridium bartlettii DSM 16795
Ribose operon repressor
rbsK
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD0299: Ribokinase (EC 2.7.1.15)
 
Clostridium bartlettii DSM 16795
Ribokinase (EC 2.7.1.15)
rbsB
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD0300: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
 
Clostridium bartlettii DSM 16795
Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
rbsA
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD0301: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
 
Clostridium bartlettii DSM 16795
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
rbsC
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD0302: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
 
Clostridium bartlettii DSM 16795
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
 
CRON 16.
CD0201
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = 78
score = 4.50666
sequence = GAGAAAATGTTTACAG

Gene: CD0201: Chromate transport protein
 
Clostridium bartlettii DSM 16795
Chromate transport protein
 
CRON 17.
CD0279A
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -370
score = 4.18945
sequence = AAGAAAACGTTATTAC

Site:
position = -325
score = 3.92466
sequence = AATAAAAAGATTTTTA

Gene: CD0279A: hypothetical protein
 
Clostridium bartlettii DSM 16795
hypothetical protein
 
CRON 18.
virS
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = 93
score = 4.87337
sequence = GAGAAAAGGATTTCTA

Gene: CD0576: virS protein
 
Clostridium bartlettii DSM 16795
virS protein
 
CRON 19.
fba
*
Clostridium hiranonis DSM 13275

Site:
position = -112
score = 4.75934
sequence = AAGAAAATGTTTGCAA

Gene: CLOHIR_01724: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
Clostridium difficile 630

Gene: CD0403: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
Clostridium bartlettii DSM 16795
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
CRON 20.
oppB
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -197
score = 4.07605
sequence = AATAAAATAATTTGAT

Gene: CD0853: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
 
Clostridium bartlettii DSM 16795
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
oppC
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -305
score = 3.96992
sequence = AGCAAAAGGTTTAAAT

Site:
position = -184
score = 3.62774
sequence = GAAAAAGTTTTTTCTT

Site:
position = -186
score = 3.75095
sequence = TTGAAAAAGTTTTTTC

Gene: CD0854: Peptide ABC transporter, permease protein
 
Clostridium bartlettii DSM 16795
Peptide ABC transporter, permease protein
oppA
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -302
score = 3.75194
sequence = AGGAATTGGTTTACCA

Gene: CD0855: Oligopeptide ABC transporter oligopeptide-binding protein
 
Clostridium bartlettii DSM 16795
Oligopeptide ABC transporter oligopeptide-binding protein
oppD
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD0856: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
 
Clostridium bartlettii DSM 16795
Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
 
CRON 21.
malX
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -141
score = 3.89268
sequence = TTGAAAAAATTTACAG

Site:
position = -39
score = 4.56583
sequence = TAGAAAACGTTTTAAA

Gene: CD1336: PTS system, maltose and glucose-specific IIC component (EC 2.7.1.69) / PTS system, maltose and glucose-specific IIB component (EC 2.7.1.69)
 
Clostridium bartlettii DSM 16795
PTS system, maltose and glucose-specific IIC component (EC 2.7.1.69) / PTS system, maltose and glucose-specific IIB component (EC 2.7.1.69)
CD1337
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD1337: Transcriptional regulator, RpiR family
 
Clostridium bartlettii DSM 16795
Transcriptional regulator, RpiR family
glvG
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -142
score = 4.16395
sequence = ATGAAAAAAATTACAA

Gene: CD1338: Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
 
Clostridium bartlettii DSM 16795
Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
 
CRON 22.
CD0679
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = 32
score = 4.17287
sequence = AAGAAATTATTTTGAA

Site:
position = -66
score = 4.19972
sequence = AGGAAATCGTATGCAT

Site:
position = -168
score = 4.71915
sequence = ATGATAACATTTTCTT

Gene: CD0679: hypothetical protein
 
Clostridium bartlettii DSM 16795
hypothetical protein
CD0680
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD0680: hypothetical protein
 
Clostridium bartlettii DSM 16795
hypothetical protein
 
CRON 23.
pgi
*
Clostridium hiranonis DSM 13275

Site:
position = -159
score = 4.87279
sequence = GAAAAAACGATTTCTT

Site:
position = -11
score = 4.0925
sequence = AGAAAAATATTATGAT

Gene: CLOHIR_01209: Glucose-6-phosphate isomerase (EC 5.3.1.9)
 
Clostridium difficile 630

Gene: CD3285: Glucose-6-phosphate isomerase (EC 5.3.1.9)
*
Clostridium bartlettii DSM 16795

Site:
position = -172
score = 4.22675
sequence = GTGATATCGTTTTCAA

Site:
position = -208
score = 4.38582
sequence = AGGAAAAATATATCAT

Gene: CLOBAR_00319: Glucose-6-phosphate isomerase (EC 5.3.1.9)
Glucose-6-phosphate isomerase (EC 5.3.1.9)
 
CRON 24.
CD2111
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -6
score = 4.2071
sequence = TAGAAAATGTTTGCAG

Gene: CD2111: Glycerol-3-phosphate regulon repressor
 
Clostridium bartlettii DSM 16795
Glycerol-3-phosphate regulon repressor
 
CRON 25.
CD2173
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = 55
score = 4.03024
sequence = GAGAAAAAATTATAAA

Gene: CD2173: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
 
Clostridium bartlettii DSM 16795
N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
CD2172
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD2172: Amino acid ABC transporter, ATP-binding protein
 
Clostridium bartlettii DSM 16795
Amino acid ABC transporter, ATP-binding protein
 
CRON 26.
nanE
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -73
score = 5.5678
sequence = AAGAAAAAGTTTTCAT

Gene: CD2241: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
 
Clostridium bartlettii DSM 16795
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
nanA
*
Clostridium hiranonis DSM 13275

Site:
position = -77
score = 4.3206
sequence = AGGAAAACGTTAATTA

Gene: CLOHIR_00196: N-acetylneuraminate lyase (EC 4.1.3.3)
 
Clostridium difficile 630

Gene: CD2240: N-acetylneuraminate lyase (EC 4.1.3.3)
 
Clostridium bartlettii DSM 16795
N-acetylneuraminate lyase (EC 4.1.3.3)
nanP
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_00197: Predicted sialic acid transporter
 
Clostridium difficile 630

Gene: CD2239: Predicted sialic acid transporter
 
Clostridium bartlettii DSM 16795
Predicted sialic acid transporter
 
CRON 27.
CD2283
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -71
score = 4.31051
sequence = TAGAAAAAAATATCAA

Gene: CD2283: NtrC family Transcriptional regulator, ATPase domain
 
Clostridium bartlettii DSM 16795
NtrC family Transcriptional regulator, ATPase domain
CD2282
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD2282: PTS system, galactitol-specific IIA component (EC 2.7.1.69)
 
Clostridium bartlettii DSM 16795
PTS system, galactitol-specific IIA component (EC 2.7.1.69)
CD2281
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -11
score = 3.90834
sequence = AGGAAATTATTATGAA

Gene: CD2281: PTS system, IIb component
 
Clostridium bartlettii DSM 16795
PTS system, IIb component
CD2280
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -101
score = 3.94201
sequence = GAAAAAACATTTTATA

Gene: CD2280: PTS system, galactitol-specific IIC component (EC 2.7.1.69)
 
Clostridium bartlettii DSM 16795
PTS system, galactitol-specific IIC component (EC 2.7.1.69)
 
CRON 28.
gatA
*
Clostridium hiranonis DSM 13275

Site:
position = -153
score = 4.74124
sequence = AAAAAAACATTTTCCT

Gene: CLOHIR_00174: PTS system, galactitol-specific IIA component (EC 2.7.1.69)
*
Clostridium difficile 630

Site:
position = -114
score = 5.28208
sequence = GGGAAAACATTTTCTT

Gene: CD2327: PTS system, galactitol-specific IIA component (EC 2.7.1.69)
 
Clostridium bartlettii DSM 16795
PTS system, galactitol-specific IIA component (EC 2.7.1.69)
gatB
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_00175: PTS system, galactitol-specific IIB component (EC 2.7.1.69)
 
Clostridium difficile 630

Gene: CD2326: PTS system, galactitol-specific IIB component (EC 2.7.1.69)
 
Clostridium bartlettii DSM 16795
PTS system, galactitol-specific IIB component (EC 2.7.1.69)
gatC
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_00176: PTS system, galactitol-specific IIC component (EC 2.7.1.69)
 
Clostridium difficile 630

Gene: CD2325: PTS system, galactitol-specific IIC component (EC 2.7.1.69)
 
Clostridium bartlettii DSM 16795
PTS system, galactitol-specific IIC component (EC 2.7.1.69)
gatD
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD2324: Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)
 
Clostridium bartlettii DSM 16795
Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)
gatD2
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_00177: Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)
 
Clostridium difficile 630

Gene: CD2323: Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)
 
Clostridium bartlettii DSM 16795
Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)
 
CRON 29.
CD2344
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -153
score = 4.30246
sequence = AAGATAAAATTTTTTT

Gene: CD2344: putative transport protein
 
Clostridium bartlettii DSM 16795
putative transport protein
cat1
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD2343: Succinyl-CoA:coenzyme A transferase (EC 2.8.3.-)
 
Clostridium bartlettii DSM 16795
Succinyl-CoA:coenzyme A transferase (EC 2.8.3.-)
sucD
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD2342: Succinate-semialdehyde dehydrogenase, CoA-dependent
 
Clostridium bartlettii DSM 16795
Succinate-semialdehyde dehydrogenase, CoA-dependent
 
CRON 30.
CD2347
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -31
score = 3.81921
sequence = AAGATAAAATTTATTA

Site:
position = 175
score = 4.27219
sequence = CAGAAAAGGTTTGCAA

Gene: CD2347: Xaa-Pro dipeptidase (EC 3.4.13.9)
 
Clostridium bartlettii DSM 16795
Xaa-Pro dipeptidase (EC 3.4.13.9)
 
CRON 31.
porA
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -10
score = 4.0422
sequence = GAGAAAAGGTATGCAA

Gene: CD2429: Pyruvate synthase alpha chain (EC 1.2.7.1)
 
Clostridium bartlettii DSM 16795
Pyruvate synthase alpha chain (EC 1.2.7.1)
porB
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD2428: Pyruvate synthase subunit porB (EC 1.2.7.1)
 
Clostridium bartlettii DSM 16795
Pyruvate synthase subunit porB (EC 1.2.7.1)
vorA
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD2427: Ketoisovalerate oxidoreductase subunit vorA (EC 1.-.-.-)
 
Clostridium bartlettii DSM 16795
Ketoisovalerate oxidoreductase subunit vorA (EC 1.-.-.-)
 
CRON 32.
ung
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_02028: Uracil-DNA glycosylase, family 1
*
Clostridium difficile 630

Site:
position = 46
score = 4.27301
sequence = TTGAAAAAGATTACTA

Gene: CD2481: Uracil-DNA glycosylase, family 1
*
Clostridium bartlettii DSM 16795

Site:
position = -71
score = 3.94066
sequence = TTTAAATAATTTTCTT

Gene: CLOBAR_02757: Uracil-DNA glycosylase, family 1
Uracil-DNA glycosylase, family 1
 
CRON 33.
cstA
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_00156: Carbon starvation protein A
*2
Clostridium difficile 630

Site:
position = -68
score = 4.98958
sequence = TGGAAATAGTTTTCTT

Gene: CD2600: Carbon starvation protein A

Gene: CD2373: Carbon starvation protein A
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_02675: Carbon starvation protein A
Carbon starvation protein A
 
CRON 34.
CD2625
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = 17
score = 4.82564
sequence = AGGAACAGGTTTACTT

Site:
position = -60
score = 5.06943
sequence = AGGATAACGTTATCAT

Gene: CD2625: Perfringolysin O regulator protein PfoR
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_01832: Perfringolysin O regulator protein PfoR
Perfringolysin O regulator protein PfoR
 
CRON 35.
CD2693
*
Clostridium hiranonis DSM 13275

Site:
position = 18
score = 4.01825
sequence = AAGAAAAAAATTGGCT

Gene: CLOHIR_01036: putative sodium:dicarboxylate symporter
*
Clostridium difficile 630

Site:
position = 3
score = 4.04038
sequence = AAGAAAAAAATAGGTT

Gene: CD2693: putative sodium:dicarboxylate symporter
 
Clostridium bartlettii DSM 16795
putative sodium:dicarboxylate symporter
 
CRON 36.
brnQ
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_01027: Branched-chain amino acid transport system carrier protein
*
Clostridium difficile 630

Site:
position = -105
score = 4.83738
sequence = GGGAAAACGTTAACAA

Gene: CD2702: Branched-chain amino acid transport system carrier protein
*
Clostridium bartlettii DSM 16795

Site:
position = -75
score = 4.05532
sequence = GGAAAAAGGTTTATAT

Gene: CLOBAR_01893: Branched-chain amino acid transport system carrier protein
Branched-chain amino acid transport system carrier protein
 
CRON 37.
CD2879
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -127
score = 4.98739
sequence = TAGATAAGGTTTTCTT

Gene: CD2879: hypothetical protein
 
Clostridium bartlettii DSM 16795
hypothetical protein
 
CRON 38.
licB
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -187
score = 5.23397
sequence = ATGAAAAAGTTTTCTT

Gene: CD2884: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
*
Clostridium bartlettii DSM 16795

Site:
position = -114
score = 4.42202
sequence = AGGAAAAGGGTTGCAT

Gene: CLOBAR_00645: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
celB
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD2883: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
 
Clostridium bartlettii DSM 16795
PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
celF
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD2882: 6-phospho-beta-glucosidase (EC 3.2.1.86)
 
Clostridium bartlettii DSM 16795
6-phospho-beta-glucosidase (EC 3.2.1.86)
CD2881
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD2881: Cellobiose phosphotransferase system YdjC-like protein
 
Clostridium bartlettii DSM 16795
Cellobiose phosphotransferase system YdjC-like protein
celC
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD2880: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
 
Clostridium bartlettii DSM 16795
PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
 
CRON 39.
cggR
*
Clostridium hiranonis DSM 13275

Site:
position = -163
score = 4.43499
sequence = GATATATCGTTTTCTT

Gene: CLOHIR_00836: Central glycolytic genes regulator
*
Clostridium difficile 630

Site:
position = -80
score = 3.99745
sequence = AAAATAAAAATATCTT

Site:
position = 108
score = 4.21706
sequence = AGGAGAACATTATCAA

Gene: CD3175: Central glycolytic genes regulator
*
Clostridium bartlettii DSM 16795

Site:
position = -16
score = 3.99745
sequence = AAAATAAAAATATCTT

Site:
position = -51
score = 3.98976
sequence = GAGAAAACATATTGAA

Gene: CLOBAR_00380: Central glycolytic genes regulator
Central glycolytic genes regulator
 
CRON 40.
CD3218
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_00125: hypothetical protein
*
Clostridium difficile 630

Site:
position = 253
score = 4.27074
sequence = GAGTTAACGTTTTCAA

Gene: CD3218: hypothetical protein
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_00652: hypothetical protein
hypothetical protein
 
CRON 41.
prdA
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_00797: D-proline reductase, 23 kDa subunit (EC 1.21.4.1)
*
Clostridium difficile 630

Site:
position = -294
score = 4.86217
sequence = GAGAAAATGTTTACAA

Gene: CD3244: D-proline reductase, 23 kDa subunit (EC 1.21.4.1)
 
Clostridium bartlettii DSM 16795
D-proline reductase, 23 kDa subunit (EC 1.21.4.1)
CLOHIR_00798
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_00798: hypothetical protein
 
Clostridium difficile 630

Gene: CD3243: hypothetical protein
 
Clostridium bartlettii DSM 16795
hypothetical protein
prdB
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_00800: proline reductase
 
Clostridium difficile 630

Gene: CD3241: proline reductase
 
Clostridium bartlettii DSM 16795
proline reductase
prdC
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_00801: Proline reductase proprotein, two subunits
 
Clostridium difficile 630

Gene: CD3240: Proline reductase proprotein, two subunits
 
Clostridium bartlettii DSM 16795
Proline reductase proprotein, two subunits
CD3239
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD3239: Proline reductase proprotein, two subunits
 
Clostridium bartlettii DSM 16795
Proline reductase proprotein, two subunits
CD3238
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD3238: Proline reductase proprotein, two subunits
 
Clostridium bartlettii DSM 16795
Proline reductase proprotein, two subunits
prdF
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_00803: Proline racemase (EC 5.1.1.4)
 
Clostridium difficile 630

Gene: CD3237: Proline racemase (EC 5.1.1.4)
 
Clostridium bartlettii DSM 16795
Proline racemase (EC 5.1.1.4)
 
CRON 42.
ldhA
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -207
score = 4.34061
sequence = AAAATAACAATTTCTT

Site:
position = -319
score = 4.55935
sequence = CAAAAAAAGTTTTCAT

Site:
position = -130
score = 4.6953
sequence = GGGAAAACAATTTCAA

Gene: CD0394: D-lactate dehydrogenase (EC 1.1.1.28)
 
Clostridium bartlettii DSM 16795
D-lactate dehydrogenase (EC 1.1.1.28)
 
CRON 43.
CD0850
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = 169
score = 4.03349
sequence = TTGAAAATGTTTTGGT

Gene: CD0850: hypothetical protein
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_02460: hypothetical protein
hypothetical protein
 
CRON 44.
spoIIAA
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = 88
score = 4.53237
sequence = AAGAAATAGATAACTT

Gene: CD0770: anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV
*
Clostridium bartlettii DSM 16795

Site:
position = 2
score = 3.76563
sequence = GATAAAATGTTATTTA

Gene: CLOBAR_01234: anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV
anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV
spoIIAB
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD0771: Anti-sigma F factor (EC 2.7.11.1)
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_01233: Anti-sigma F factor (EC 2.7.11.1)
Anti-sigma F factor (EC 2.7.11.1)
sigF
*
Clostridium hiranonis DSM 13275

Site:
position = -218
score = 4.02926
sequence = AATAAAAAGTTATTCT

Gene: CLOHIR_00712: RNA polymerase sporulation specific sigma factor SigF
 
Clostridium difficile 630

Gene: CD0772: RNA polymerase sporulation specific sigma factor SigF
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_01232: RNA polymerase sporulation specific sigma factor SigF
RNA polymerase sporulation specific sigma factor SigF
 
CRON 45.
CD0183
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_00047: Invasion associated protein p60
*
Clostridium difficile 630

Site:
position = 3
score = 4.13843
sequence = AAGAAAAAGATATTAA

Gene: CD0183: Invasion associated protein p60
 
Clostridium bartlettii DSM 16795
Invasion associated protein p60
 
CRON 46.
CD2791
*
Clostridium hiranonis DSM 13275

Site:
position = -141
score = 4.29873
sequence = GAGAATAAGTTATCAA

Gene: CLOHIR_00956: cell surface protein (putative S-layer protein precursor)
*
Clostridium difficile 630

Site:
position = -131
score = 4.71574
sequence = AAGAAAAAGTTTATAT

Gene: CD2791: cell surface protein (putative S-layer protein precursor)
 
Clostridium bartlettii DSM 16795
cell surface protein (putative S-layer protein precursor)
 
CRON 47.
dltD
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = 184
score = 4.26211
sequence = GAGAAAAGGATATTAT

Gene: CD2854: Poly(glycerophosphate chain) D-alanine transfer protein DltD
 
Clostridium bartlettii DSM 16795
Poly(glycerophosphate chain) D-alanine transfer protein DltD
dltA
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD2853: D-alanine--poly(phosphoribitol) ligase subunit 1 (EC 6.1.1.13)
 
Clostridium bartlettii DSM 16795
D-alanine--poly(phosphoribitol) ligase subunit 1 (EC 6.1.1.13)
dltB
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD2852: D-alanyl transfer protein DltB
 
Clostridium bartlettii DSM 16795
D-alanyl transfer protein DltB
dltC
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD2851: D-alanine--poly(phosphoribitol) ligase subunit 2 (EC 6.1.1.13)
 
Clostridium bartlettii DSM 16795
D-alanine--poly(phosphoribitol) ligase subunit 2 (EC 6.1.1.13)
 
CRON 48.
CD2795
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = 12
score = 4.4988
sequence = AAAAAAATATTATCAT

Gene: CD2795: N-acetylmuramoyl-L-alanine amidase
 
Clostridium bartlettii DSM 16795
N-acetylmuramoyl-L-alanine amidase
 
CRON 49.
CD0830
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -269
score = 4.16325
sequence = AAGAAAAAATTATATA

Gene: CD0830: Transporter
 
Clostridium bartlettii DSM 16795
Transporter
 
CRON 50.
ptsH
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_00990: Phosphocarrier protein of PTS system
*
Clostridium difficile 630

Site:
position = -55
score = 4.1537
sequence = AGGAAAACAATTTTAA

Gene: CD2756: Phosphocarrier protein of PTS system
*
Clostridium bartlettii DSM 16795

Site:
position = -39
score = 3.82143
sequence = AAAATAAAATTTTTAT

Gene: CLOBAR_02362: Phosphocarrier protein of PTS system
Phosphocarrier protein of PTS system
 
CRON 51.
CD0209
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = 0
score = 4.10368
sequence = ATGAAAAAGTTACCAA

Gene: CD0209: probable tagatose 6-phosphate kinase
 
Clostridium bartlettii DSM 16795
probable tagatose 6-phosphate kinase
 
CRON 52.
tdcB
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_01990: Threonine dehydratase (EC 4.3.1.19)
*
Clostridium difficile 630

Site:
position = -94
score = 4.47874
sequence = TAAAAATCGTTTACAT

Gene: CD2514: Threonine dehydratase (EC 4.3.1.19)
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_00898: Threonine dehydratase (EC 4.3.1.19)
Threonine dehydratase (EC 4.3.1.19)
 
CRON 53.
CD2385
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = 221
score = 4.02815
sequence = TAGAACTCATTTTGAT

Gene: CD2485: Xaa-Pro dipeptidase (EC 3.4.13.9)
 
Clostridium bartlettii DSM 16795
Xaa-Pro dipeptidase (EC 3.4.13.9)
 
CRON 54.
grdX
*
Clostridium hiranonis DSM 13275

Site:
position = 47
score = 4.24687
sequence = AAAAGAAAGTTTTCCT

Site:
position = 116
score = 4.30184
sequence = TAGAAAATATATTCAT

Gene: CLOHIR_00161: GrdX protein
*
Clostridium difficile 630

Site:
position = 197
score = 4.51437
sequence = AGGAAATCGTTTGGAT

Gene: CD2357: GrdX protein
 
Clostridium bartlettii DSM 16795
GrdX protein
trxB3
*
Clostridium hiranonis DSM 13275

Site:
position = -97
score = 4.32997
sequence = CGGAAAACATTTACAA

Gene: CLOHIR_00162: Thioredoxin reductase (EC 1.8.1.9)
 
Clostridium difficile 630

Gene: CD2356: Thioredoxin reductase (EC 1.8.1.9)
 
Clostridium bartlettii DSM 16795
Thioredoxin reductase (EC 1.8.1.9)
 
CRON 55.
trxA2
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_00163: Thioredoxin
*
Clostridium difficile 630

Site:
position = -6
score = 4.19773
sequence = AAGAAAATGTTAGATT

Gene: CD2355: Thioredoxin
 
Clostridium bartlettii DSM 16795
Thioredoxin
 
CRON 56.
grdE
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_00164: Glycine reductase component B beta subunit (EC 1.21.4.2) / Glycine reductase component B alpha subunit (EC 1.21.4.2)
*
Clostridium difficile 630

Site:
position = -211
score = 4.36578
sequence = AGAAAAAGGTTTTTAT

Gene: CD2354: Glycine reductase component B beta subunit (EC 1.21.4.2) / Glycine reductase component B alpha subunit (EC 1.21.4.2)
 
Clostridium bartlettii DSM 16795
Glycine reductase component B beta subunit (EC 1.21.4.2) / Glycine reductase component B alpha subunit (EC 1.21.4.2)
 
CRON 57.
gcvPB
 
Clostridium hiranonis DSM 13275
*2
Clostridium difficile 630

Site:
position = -493
score = 4.14417
sequence = GTGAAAATGTTATTTT

Gene: CD1657: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)

Gene: CD1658: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
 
Clostridium bartlettii DSM 16795
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
 
CRON 58.
CD3664
*
Clostridium hiranonis DSM 13275

Site:
position = -31
score = 4.28211
sequence = AAATAAACATTTTCAT

Gene: CLOHIR_02123: Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
*
Clostridium difficile 630

Site:
position = -31
score = 5.41237
sequence = AAGAAAACATTTTCAT

Gene: CD3664: Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
 2
Clostridium bartlettii DSM 16795

Gene: CLOBAR_02749: Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)

Gene: CLOBAR_01198: Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
 
CRON 59.
rlmH
 
Clostridium hiranonis DSM 13275

Gene: CLOHIR_02154: LSU m3Psi1915 methyltransferase RlmH
*
Clostridium difficile 630

Site:
position = 69
score = 4.62605
sequence = AAGAAAAGGCTTTCTA

Gene: CD3649: LSU m3Psi1915 methyltransferase RlmH
*
Clostridium bartlettii DSM 16795

Site:
position = 69
score = 4.58872
sequence = AAAAAAAGGTTATCTA

Gene: CLOBAR_00039: LSU m3Psi1915 methyltransferase RlmH
LSU m3Psi1915 methyltransferase RlmH
 
CRON 60.
CD0177
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -88
score = 4.05402
sequence = TGAAAAAATTTTACTT

Gene: CD0177: Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79)
 
Clostridium bartlettii DSM 16795
Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79)
 
CRON 61.
tagK
 
Clostridium hiranonis DSM 13275
*
Clostridium difficile 630

Site:
position = -68
score = 4.77087
sequence = GTGAAAAGATTTTCAT

Gene: CD3076: 1-phosphofructokinase (EC 2.7.1.56)
*
Clostridium bartlettii DSM 16795

Site:
position = -79
score = 4.20329
sequence = TGAAAATGGTTTTCTA

Site:
position = -60
score = 4.68233
sequence = TTGAAAAGATTTTCAT

Gene: CLOBAR_02382: 1-phosphofructokinase (EC 2.7.1.56)
1-phosphofructokinase (EC 2.7.1.56)
tagT
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD3075: PTS system, fructose-specific IIBC component (EC 2.7.1.69)
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_02383: PTS system, fructose-specific IIBC component (EC 2.7.1.69)
PTS system, fructose-specific IIBC component (EC 2.7.1.69)
gatY
 
Clostridium hiranonis DSM 13275
 
Clostridium difficile 630

Gene: CD3074: Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)
 
Clostridium bartlettii DSM 16795

Gene: CLOBAR_02384: Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)
Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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