Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog SusR - Bacteroidaceae

Properties
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: repressor
Biological process: Starch utilization
Effector:
Phylum: Bacteroidetes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 18 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacteroides cellulosilyticus DSM 14838
Bacteroides coprophilus DSM 18228 4 1
Bacteroides dorei DSM 17855 12 2
Bacteroides eggerthii DSM 20697
Bacteroides fragilis NCTC 9343
Bacteroides ovatus ATCC 8483 6 2
Bacteroides plebeius DSM 17135 5 2
Bacteroides stercoris ATCC 43183
Bacteroides thetaiotaomicron VPI-5482 7 2
Bacteroides uniformis ATCC 8492
Bacteroides vulgatus ATCC 8482 4 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
susC
 2
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_05446: SusC, outer membrane protein involved in starch binding

Gene: BACCELL_01427: SusC, outer membrane protein involved in starch binding
 
Bacteroides coprophilus DSM 18228

Gene: BACCOPRO_01926: SusC, outer membrane protein involved in starch binding
*4
Bacteroides dorei DSM 17855

Site:
position = -193
score = 5.57646
sequence = CATTTATATTTTTT

Site:
position = -116
score = 5.77376
sequence = CATTTATATTTTTA

Gene: BACDOR_02280: SusC, outer membrane protein involved in starch binding

Gene: BACDOR_02279: SusC, outer membrane protein involved in starch binding

Gene: BACDOR_02278: SusC, outer membrane protein involved in starch binding

Gene: BACDOR_02284: SusC, outer membrane protein involved in starch binding
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_03518: SusC, outer membrane protein involved in starch binding
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_02370: SusC, outer membrane protein involved in starch binding
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT3702: SusC, outer membrane protein involved in starch binding
 
Bacteroides uniformis ATCC 8492
*
Bacteroides vulgatus ATCC 8482

Site:
position = -214
score = 5.30475
sequence = CTTTTATATTTTTA

Gene: BVU_1380: SusC, outer membrane protein involved in starch binding
SusC, outer membrane protein involved in starch binding
susD
 2
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_05445: SusD, outer membrane protein

Gene: BACCELL_01428: SusD, outer membrane protein
 
Bacteroides coprophilus DSM 18228

Gene: BACCOPRO_01927: SusD, outer membrane protein
 2
Bacteroides dorei DSM 17855

Gene: BACDOR_02282: SusD, outer membrane protein

Gene: BACDOR_02277: SusD, outer membrane protein
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_03517: SusD, outer membrane protein
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_02369: SusD, outer membrane protein
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT3701: SusD, outer membrane protein
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_1379: SusD, outer membrane protein
SusD, outer membrane protein
susE
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_05444: Outer membrane protein SusE
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_02276: Outer membrane protein SusE
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_03516: Outer membrane protein SusE
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_02368: Outer membrane protein SusE
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT3700: Outer membrane protein SusE
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Outer membrane protein SusE
susF
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_05443: Outer membrane protein SusF
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_02275: Outer membrane protein SusF
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_03515: Outer membrane protein SusF
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT3699: Outer membrane protein SusF
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Outer membrane protein SusF
susG
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_02274: Alpha-amylase SusG (EC 3.2.1.1)
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT3698: Alpha-amylase SusG (EC 3.2.1.1)
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Alpha-amylase SusG (EC 3.2.1.1)
susB
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228

Gene: BACCOPRO_01925: Alpha-glucosidase SusB (EC 3.2.1.20)
 
Bacteroides dorei DSM 17855

Gene: BACDOR_02285: Alpha-glucosidase SusB (EC 3.2.1.20)
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
*
Bacteroides ovatus ATCC 8483

Site:
position = -184
score = 5.05251
sequence = GACTTATATTTATC

Site:
position = -117
score = 5.23892
sequence = AACTTGTATTTTTA

Gene: BACOVA_03519: Alpha-glucosidase SusB (EC 3.2.1.20)
*
Bacteroides plebeius DSM 17135

Site:
position = -109
score = 5.24407
sequence = GATTTATATTTTCC

Gene: BACPLE_02371: Alpha-glucosidase SusB (EC 3.2.1.20)
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -184
score = 5.10164
sequence = AACTTATATTTATC

Site:
position = -117
score = 5.23892
sequence = AACTTGTATTTTTA

Gene: BT3703: Alpha-glucosidase SusB (EC 3.2.1.20)
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_1381: Alpha-glucosidase SusB (EC 3.2.1.20)
Alpha-glucosidase SusB (EC 3.2.1.20)
susA
 
Bacteroides cellulosilyticus DSM 14838
*
Bacteroides coprophilus DSM 18228

Site:
position = -88
score = 5.58735
sequence = AATTTATATTTTTA

Gene: BACCOPRO_01924: Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)
*
Bacteroides dorei DSM 17855

Site:
position = -167
score = 5.18221
sequence = CGTTTATATTTTCA

Site:
position = -100
score = 5.77376
sequence = CATTTATATTTTTA

Gene: BACDOR_02286: Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
*
Bacteroides ovatus ATCC 8483

Site:
position = -163
score = 5.34975
sequence = CACTTGTATTTTTC

Gene: BACOVA_03520: Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)
*
Bacteroides plebeius DSM 17135

Site:
position = -148
score = 5.08284
sequence = CATTTATATTTTAG

Site:
position = -82
score = 4.8473
sequence = TATTTATATTTTAT

Gene: BACPLE_02372: Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -163
score = 5.34975
sequence = CACTTGTATTTTTC

Site:
position = -96
score = 5.35788
sequence = CATTTATATTTTCT

Gene: BT3704: Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)
 
Bacteroides uniformis ATCC 8492
*
Bacteroides vulgatus ATCC 8482

Site:
position = -167
score = 5.18221
sequence = CGTTTATATTTTCA

Site:
position = -100
score = 5.77376
sequence = CATTTATATTTTTA

Gene: BVU_1382: Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)
Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)
BACDOR_02283
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_02283: Hypothetical protein
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD