Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog CcpA - Clostridia-1

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Carbohydrate metabolism
Effector: HPr, phosphocarrier protein
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 436 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Clostridium acetobutylicum ATCC 824 161 92
Clostridium beijerincki NCIMB 8052 135 74
Clostridium botulinum A str. ATCC 3502 51 40
Clostridium butyricum 5521 129 54
Clostridium kluyveri DSM 555 30 13
Clostridium novyi NT 32 21
Clostridium perfringens ATCC 13124 52 28
Clostridium tetani E88 35 20
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
fruA
*
Clostridium acetobutylicum ATCC 824

Site:
position = -51
score = 4.90319
sequence = TTGAAAACGTTTTTAT

Gene: CAC1462: Fructanase (EC 3.2.1.80) / Levanase (EC 3.2.1.65)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Fructanase (EC 3.2.1.80) / Levanase (EC 3.2.1.65)
 
CRON 2.
manB
*
Clostridium acetobutylicum ATCC 824

Site:
position = -158
score = 4.77124
sequence = TTGTAAACGTTTTTAT

Gene: CAC0332: Beta-mannanase (EC 3.2.1.78)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Beta-mannanase (EC 3.2.1.78)
 
CRON 3.
CAC0164
*
Clostridium acetobutylicum ATCC 824

Site:
position = -38
score = 4.35465
sequence = TTGAAAACGCTATCAT

Gene: CAC0164: ABC transporter, ATP binding-protein
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
ABC transporter, ATP binding-protein
CAC0165
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0165: ABC transporter permease protein
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
ABC transporter permease protein
 
CRON 4.
glnN
*
Clostridium acetobutylicum ATCC 824

Site:
position = -157
score = 4.52548
sequence = TAGTAAACGTTTTCTT

Site:
position = -202
score = 4.64591
sequence = ATGAAAAAATTTACAA

Gene: CAC2658: Glutamine synthetase type III, GlnN (EC 6.3.1.2)
*
Clostridium beijerincki NCIMB 8052

Site:
position = -70
score = 3.9648
sequence = TTATTAATGTTTTTAA

Gene: Cbei_0444: Glutamine synthetase type III, GlnN (EC 6.3.1.2)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1367: Glutamine synthetase type III, GlnN (EC 6.3.1.2)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Glutamine synthetase type III, GlnN (EC 6.3.1.2)
 
CRON 5.
ganA
*
Clostridium acetobutylicum ATCC 824

Site:
position = -56
score = 4.583
sequence = TAGAAAACGATTTCTT

Gene: CAC2570: Arabinogalactan endo-1,4-beta-galactosidase
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Arabinogalactan endo-1,4-beta-galactosidase
 
CRON 6.
CAC0358
*
Clostridium acetobutylicum ATCC 824

Site:
position = 3
score = 4.16244
sequence = AATAAAATTTTTAAAT

Gene: CAC0358: Predicted polysaccharide deacetylase
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0241: Predicted polysaccharide deacetylase
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted polysaccharide deacetylase
CAC0357
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0357: Permease of the Na:galactoside symporter family
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -52
score = 3.89036
sequence = AAATAAATAATTTTAT

Gene: CBY_0240: Permease of the Na:galactoside symporter family
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Permease of the Na:galactoside symporter family
CAC0356
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0356: Conserved hypothetical protein
*
Clostridium beijerincki NCIMB 8052

Site:
position = -172
score = 4.0915
sequence = TAGATAATGTTTTTTA

Gene: Cbei_3239: Conserved hypothetical protein
 
Clostridium botulinum A str. ATCC 3502
*2
Clostridium butyricum 5521

Site:
position = -54
score = 4.39776
sequence = ATGTAAATAATTACAA

Gene: CBY_0242: Conserved hypothetical protein

Gene: CBY_3290: Conserved hypothetical protein
 
Clostridium kluyveri DSM 555
*
Clostridium novyi NT

Site:
position = 46
score = 3.99957
sequence = TTGTTAAAGCTTTAAA

Gene: NT01CX_1623: Conserved hypothetical protein
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Conserved hypothetical protein
pgl
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0355: Polygalacturonase (EC 3.2.1.15)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Polygalacturonase (EC 3.2.1.15)
CBY_0239
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0239: Glycoside hydrolase
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Glycoside hydrolase
 
CRON 7.
gluA
*
Clostridium acetobutylicum ATCC 824

Site:
position = -50
score = 4.74713
sequence = TTGTAAATGTTTTCAT

Gene: CAC1075: Periplasmic beta-glucosidase family protein
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Periplasmic beta-glucosidase family protein
 
CRON 8.
mutT1
*
Clostridium acetobutylicum ATCC 824

Site:
position = -94
score = 3.92021
sequence = ATATTAAAATTTTCAA

Site:
position = -70
score = 4.63573
sequence = AAGAAAACGATTATAT

Gene: CAC2828: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)
*
Clostridium beijerincki NCIMB 8052

Site:
position = -132
score = 4.32278
sequence = TTTAAAAATATTTAAT

Gene: Cbei_2775: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)
*2
Clostridium botulinum A str. ATCC 3502

Site:
position = -42
score = 3.92782
sequence = AAAAAAATTATTTTAT

Gene: CBO2085: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)

Gene: CBO0653: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT

Gene: NT01CX_2016: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)
 
Clostridium perfringens ATCC 13124

Gene: CPF_1031: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)
 
Clostridium tetani E88

Gene: CTC01909: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)
Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)
CAC2827
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2827: Predicted S-adenosylmethionine-dependent methyltransferase
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted S-adenosylmethionine-dependent methyltransferase
 
CRON 9.
pelL2
*2
Clostridium acetobutylicum ATCC 824

Site:
position = -129
score = 3.97239
sequence = AATAAAAAGTTTTACA

Site:
position = -44
score = 4.36523
sequence = ATGTTAACGTTAACAT

Gene: CAP0056: Pectate lyase, secreted, polysaccharide lyase family

Site:
position = -47
score = 4.30896
sequence = TAGTAAAAGATTTTTT

Gene: CAC1968: Pectate lyase, secreted, polysaccharide lyase family
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -115
score = 4.38828
sequence = AAGAAAATATTTACAA

Site:
position = -41
score = 4.15923
sequence = TTGTTAACGATAACAA

Gene: CBY_3715: Pectate lyase, secreted, polysaccharide lyase family
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Pectate lyase, secreted, polysaccharide lyase family
 
CRON 10.
CKL_1779
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
*
Clostridium kluyveri DSM 555

Site:
position = -32
score = 4.03998
sequence = AAGATAAAATTTATAA

Gene: CKL_1779: Predicted glycogen synthase (EC 2.4.1.11)
*
Clostridium novyi NT

Site:
position = -65
score = 4.07311
sequence = TTGAAAATAAATTTAT

Gene: NT01CX_0100: Predicted glycogen synthase (EC 2.4.1.11)
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted glycogen synthase (EC 2.4.1.11)
mpg
*
Clostridium acetobutylicum ATCC 824

Site:
position = -124
score = 4.59555
sequence = ATGTAAACGTTAATAT

Gene: CAC2981: Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) / Phosphomannomutase (EC 5.4.2.8)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 2
Clostridium kluyveri DSM 555

Gene: CKL_1778: Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) / Phosphomannomutase (EC 5.4.2.8)

Gene: CKL_0995: Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) / Phosphomannomutase (EC 5.4.2.8)
 
Clostridium novyi NT

Gene: NT01CX_0099: Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) / Phosphomannomutase (EC 5.4.2.8)
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) / Phosphomannomutase (EC 5.4.2.8)
 
CRON 11.
CAC0421
*
Clostridium acetobutylicum ATCC 824

Site:
position = -137
score = 4.50665
sequence = ATGATAACATTTTCAT

Gene: CAC0421: Predicted membrane protein
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC01324: Predicted membrane protein
Predicted membrane protein
 
CRON 12.
lacB
*
Clostridium acetobutylicum ATCC 824

Site:
position = -63
score = 4.32007
sequence = TATAAAAAGTTTTATA

Gene: CAC2514: Probable beta-galactosidase B (EC 3.2.1.23)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Probable beta-galactosidase B (EC 3.2.1.23)
 
CRON 13.
solR
*
Clostridium acetobutylicum ATCC 824

Site:
position = -170
score = 4.64742
sequence = TTGAAAACATTTTCTT

Gene: CAP0161: Transcription regulator of butanol and acetone formation
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Transcription regulator of butanol and acetone formation
 
CRON 14.
lipG
*
Clostridium acetobutylicum ATCC 824

Site:
position = -189
score = 4.40504
sequence = ATTAAAAAAATTTAAA

Gene: CAP0097: Putative hydrolase
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_3238: Putative hydrolase
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Putative hydrolase
ipyR
 
Clostridium acetobutylicum ATCC 824

Gene: CAP0096: Inorganic pyrophosphatase
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Inorganic pyrophosphatase
 
CRON 15.
xylT
*
Clostridium acetobutylicum ATCC 824

Site:
position = -61
score = 4.56569
sequence = ATGAAATCGTTTAAAA

Site:
position = -79
score = 3.96017
sequence = TATAAAAATTTATCAT

Gene: CAC1345: Arabinose-proton symporter
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Arabinose-proton symporter
araA
 2
Clostridium acetobutylicum ATCC 824

Gene: CAC1346: L-arabinose isomerase (EC 5.3.1.4)

Gene: CAC1342: L-arabinose isomerase (EC 5.3.1.4)
*
Clostridium beijerincki NCIMB 8052

Site:
position = -192
score = 3.94661
sequence = ATGAAAAGGTATACTA

Gene: Cbei_4457: L-arabinose isomerase (EC 5.3.1.4)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
L-arabinose isomerase (EC 5.3.1.4)
tal
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1347: Transaldolase (EC 2.2.1.2)
*3
Clostridium beijerincki NCIMB 8052

Site:
position = -117
score = 4.01594
sequence = AAGAAAATGTCTAAAT

Gene: Cbei_4454: Transaldolase (EC 2.2.1.2)

Site:
position = -43
score = 3.96942
sequence = TATTAAATGATTTTTA

Site:
position = -112
score = 4.00785
sequence = AAATAAATATTTACAT

Gene: Cbei_2386: Transaldolase (EC 2.2.1.2)

Gene: Cbei_4645: Transaldolase (EC 2.2.1.2)
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -175
score = 3.96979
sequence = GAGAAAACGTTATAAA

Site:
position = -219
score = 4.08529
sequence = ATAAAAATTTTAAAAT

Gene: CBO1292: Transaldolase (EC 2.2.1.2)
 2
Clostridium butyricum 5521

Gene: CBY_2344: Transaldolase (EC 2.2.1.2)

Gene: CBY_3805: Transaldolase (EC 2.2.1.2)
 
Clostridium kluyveri DSM 555

Gene: CKL_0998: Transaldolase (EC 2.2.1.2)
 
Clostridium novyi NT

Gene: NT01CX_0748: Transaldolase (EC 2.2.1.2)
*
Clostridium perfringens ATCC 13124

Site:
position = -128
score = 4.19603
sequence = ATGTAAACTTTAAATA

Site:
position = -232
score = 4.13561
sequence = ATGATAAAGGTTACAT

Gene: CPF_0684: Transaldolase (EC 2.2.1.2)
*
Clostridium tetani E88

Site:
position = -78
score = 3.94774
sequence = TTTAAATTAATTAAAT

Site:
position = -162
score = 3.90469
sequence = GTGTAAAAATTTACAA

Site:
position = -32
score = 3.91601
sequence = TTATAATAGATTTATT

Gene: CTC00228: Transaldolase (EC 2.2.1.2)
Transaldolase (EC 2.2.1.2)
tkt
 2
Clostridium acetobutylicum ATCC 824

Gene: CAC0944: Transketolase (EC 2.2.1.1)

Gene: CAC1348: Transketolase (EC 2.2.1.1)
 4
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0532: Transketolase (EC 2.2.1.1)

Gene: Cbei_4453: Transketolase (EC 2.2.1.1)

Gene: Cbei_2387: Transketolase (EC 2.2.1.1)

Gene: Cbei_4644: Transketolase (EC 2.2.1.1)
 
Clostridium botulinum A str. ATCC 3502
*2
Clostridium butyricum 5521

Site:
position = -42
score = 3.9149
sequence = TGGAAAACATTTGAAT

Site:
position = -59
score = 3.92452
sequence = ATGATTAAGATTTTAA

Site:
position = -76
score = 4.12631
sequence = ATGAATAAATTTACAA

Gene: CBY_2438: Transketolase (EC 2.2.1.1)

Gene: CBY_2345: Transketolase (EC 2.2.1.1)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC01332: Transketolase (EC 2.2.1.1)
Transketolase (EC 2.2.1.1)
galM
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1349: L-arabinose-specific 1-epimerase (mutarotase)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
L-arabinose-specific 1-epimerase (mutarotase)
ulaE
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -66
score = 4.01903
sequence = TATAAAAAGTTATTTA

Gene: CBY_3808: L-ribulose-5-phosphate 3-epimerase (EC 5.1.3.22)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
L-ribulose-5-phosphate 3-epimerase (EC 5.1.3.22)
tkt2
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 2
Clostridium butyricum 5521

Gene: CBY_3381: Putative transketolase

Gene: CBY_3807: Putative transketolase
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Putative transketolase
tkt3
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 2
Clostridium butyricum 5521

Gene: CBY_3382: Transketolase

Gene: CBY_3806: Transketolase
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Transketolase
rpe
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_3804: Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
xylB
*
Clostridium acetobutylicum ATCC 824

Site:
position = -104
score = 4.87179
sequence = ATGAAAAAGTTTACAA

Site:
position = -35
score = 4.2349
sequence = TTTAAAAAGTTATTTA

Gene: CAC2612: Xylulose kinase (EC 2.7.1.17)
*
Clostridium beijerincki NCIMB 8052

Site:
position = -152
score = 4.44107
sequence = ATGAAAATGTATTCAA

Site:
position = -83
score = 4.2349
sequence = TTTAAAAAGTTATTTA

Gene: Cbei_2384: Xylulose kinase (EC 2.7.1.17)
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -34
score = 4.5513
sequence = TTGTAAATGTTTAATA

Site:
position = -57
score = 4.47884
sequence = TTAAAAATGTTTTTAT

Site:
position = -77
score = 3.93322
sequence = TTTAAAAAGAATTTTA

Gene: CBY_2342: Xylulose kinase (EC 2.7.1.17)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Xylulose kinase (EC 2.7.1.17)
xylR
*
Clostridium acetobutylicum ATCC 824

Site:
position = -122
score = 4.07616
sequence = AAGAAAAAATATACAT

Gene: CAC3673: Transcription repressor of xylose utilization, ROK family
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_2385: Transcription repressor of xylose utilization, ROK family
 
Clostridium botulinum A str. ATCC 3502
*2
Clostridium butyricum 5521

Gene: CBY_2343: Transcription repressor of xylose utilization, ROK family

Site:
position = -95
score = 3.96804
sequence = AATAAAAATATATAAT

Gene: CBY_2431: Transcription repressor of xylose utilization, ROK family
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Transcription repressor of xylose utilization, ROK family
CAC2611
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2611: Hypothetical protein
*
Clostridium beijerincki NCIMB 8052

Site:
position = -145
score = 4.2558
sequence = TTATAAAAGTTAAAAT

Gene: Cbei_2388: Hypothetical protein
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -72
score = 4.07956
sequence = TTTAAAAAGTATTTTT

Site:
position = -42
score = 4.17167
sequence = TATAAAACTTTTTAAA

Gene: CBY_2380: Hypothetical protein
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Hypothetical protein
CAC2610
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2610: Predicted xylose isomerase
*2
Clostridium beijerincki NCIMB 8052

Site:
position = -126
score = 4.20939
sequence = ATAAAAATTATTAAAT

Site:
position = -171
score = 3.94611
sequence = TTGATAATAATAAATT

Gene: Cbei_2389: Predicted xylose isomerase

Site:
position = -42
score = 4.32074
sequence = ATTATAAAGATTTAAA

Site:
position = -244
score = 4.3068
sequence = TTTAAAAAGTTATTTT

Gene: Cbei_4681: Predicted xylose isomerase
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_2379: Predicted xylose isomerase
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted xylose isomerase
cca
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
*
Clostridium novyi NT

Site:
position = -30
score = 3.988
sequence = TTAAAAATTATATAAT

Site:
position = -131
score = 4.21783
sequence = AAGAAAAATTTTATTT

Gene: NT01CX_0749: tRNA nucleotidyltransferase, CC-adding (EC 2.7.7.21)
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
tRNA nucleotidyltransferase, CC-adding (EC 2.7.7.21)
araD
*
Clostridium acetobutylicum ATCC 824

Site:
position = -157
score = 3.85965
sequence = TAGAAAAAGAAAACTT

Site:
position = -105
score = 3.97372
sequence = TGGTAAACGTTTTACT

Gene: CAC1341: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
 
CRON 16.
CAC0383
*
Clostridium acetobutylicum ATCC 824

Site:
position = -153
score = 4.02614
sequence = ACTAAAATGTTTACAT

Gene: CAC0383: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
*3
Clostridium beijerincki NCIMB 8052

Site:
position = -162
score = 4.69209
sequence = TTGTAAACGTTTTATA

Gene: Cbei_4636: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)

Gene: Cbei_4685: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)

Site:
position = -176
score = 4.0632
sequence = CTGAAAATATTTTTAA

Site:
position = -46
score = 4.84097
sequence = TTGAAAAAGTTTTTAT

Gene: Cbei_1475: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_3764: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
Cbei_0758
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0384: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
 3
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4635: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)

Gene: Cbei_4684: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)

Gene: Cbei_1476: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
bglC
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0385: Beta-glucosidase (EC 3.2.1.21)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_1477: Beta-glucosidase (EC 3.2.1.21)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_2069: Beta-glucosidase (EC 3.2.1.21)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Beta-glucosidase (EC 3.2.1.21)
Cbei_4683
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0386: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
*3
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4634: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)

Gene: Cbei_1478: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)

Site:
position = -83
score = 4.06662
sequence = ATATAAAAGATAATAA

Gene: Cbei_4683: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -157
score = 4.63103
sequence = AAGAAAACGTTTAATA

Gene: CBY_2072: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Cbei_4468
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4468: Transcriptional regulator, GntR family
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_2071: Transcriptional regulator, GntR family
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Transcriptional regulator, GntR family
 
CRON 17.
CAC0532
*
Clostridium acetobutylicum ATCC 824

Site:
position = -202
score = 4.42144
sequence = TTGAAAAGGTTTTCTT

Gene: CAC0532: PTS system, maltose and glucose-specific IICB component (EC 2.7.1.69)
*
Clostridium beijerincki NCIMB 8052

Site:
position = -51
score = 4.39321
sequence = ATGATAATGTTAACAT

Gene: Cbei_4705: PTS system, maltose and glucose-specific IICB component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0423: PTS system, maltose and glucose-specific IICB component (EC 2.7.1.69)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, maltose and glucose-specific IICB component (EC 2.7.1.69)
glvA
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0533: Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
 
Clostridium beijerincki NCIMB 8052
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -42
score = 4.10393
sequence = ATGAAAATAAATACAA

Gene: CBO0278: Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
 
CRON 18.
CAP0160
*
Clostridium acetobutylicum ATCC 824

Site:
position = -170
score = 4.65098
sequence = AAGAAAATGTTTTCAA

Gene: CAP0160: Predicted cell-surface chitinase
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted cell-surface chitinase
 
CRON 19.
CAC3280
*9
Clostridium acetobutylicum ATCC 824

Site:
position = -107
score = 4.13831
sequence = ATTTAAACTATTTTAA

Site:
position = -87
score = 3.99576
sequence = ATTAAATCTTTTTCTT

Gene: CAC3275: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats

Site:
position = -104
score = 3.94532
sequence = ATTTAAATTTTAATAT

Gene: CAC3274: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats

Site:
position = -167
score = 4.43602
sequence = ATGAATACGTTTTATT

Gene: CAP0002: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats

Site:
position = -48
score = 4.57652
sequence = AAGAAAACGATATAAT

Gene: CAP0003: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats

Gene: CAC3278: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats

Site:
position = -131
score = 3.96939
sequence = AAGTAATCTTTTAAAT

Gene: CAC3279: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats

Gene: CAC3280: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats

Site:
position = -75
score = 4.34323
sequence = ATAAAAATATTTTAAA

Gene: CAC3272: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats

Site:
position = -114
score = 4.0749
sequence = ATGTAAATCTTTAAAA

Gene: CAC3273: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
 
CRON 20.
lrgA
*
Clostridium acetobutylicum ATCC 824

Site:
position = -119
score = 4.24141
sequence = ATGTAATCGTTATTAT

Site:
position = -150
score = 3.89784
sequence = AATTAAAATTTTATAA

Gene: CAC0612: Antiholin-like protein LrgA
 2
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0936: Antiholin-like protein LrgA

Gene: Cbei_5007: Antiholin-like protein LrgA
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -63
score = 4.30693
sequence = ATGAAAAAGTAATAAA

Gene: CBO0324: Antiholin-like protein LrgA
*
Clostridium butyricum 5521

Site:
position = -80
score = 4.61088
sequence = ATAAAAAAGTTTTAAA

Gene: CBY_0413: Antiholin-like protein LrgA
*2
Clostridium kluyveri DSM 555

Site:
position = -217
score = 4.31795
sequence = AAGTAAATGATATCAT

Gene: CKL_2031: Antiholin-like protein LrgA

Gene: CKL_2526: Antiholin-like protein LrgA
*
Clostridium novyi NT

Site:
position = -140
score = 4.184
sequence = AATAAAATATTTTATT

Gene: NT01CX_0754: Antiholin-like protein LrgA
 
Clostridium perfringens ATCC 13124

Gene: CPF_2235: Antiholin-like protein LrgA
 
Clostridium tetani E88

Gene: CTC01825: Antiholin-like protein LrgA
Antiholin-like protein LrgA
lrgB
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0611: LrgA-associated membrane protein LrgB
 2
Clostridium beijerincki NCIMB 8052

Gene: Cbei_5006: LrgA-associated membrane protein LrgB

Gene: Cbei_0937: LrgA-associated membrane protein LrgB
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO0325: LrgA-associated membrane protein LrgB
 
Clostridium butyricum 5521

Gene: CBY_0412: LrgA-associated membrane protein LrgB
 2
Clostridium kluyveri DSM 555

Gene: CKL_2030: LrgA-associated membrane protein LrgB

Gene: CKL_2525: LrgA-associated membrane protein LrgB
 
Clostridium novyi NT

Gene: NT01CX_0755: LrgA-associated membrane protein LrgB
 
Clostridium perfringens ATCC 13124

Gene: CPF_2236: LrgA-associated membrane protein LrgB
 
Clostridium tetani E88

Gene: CTC01826: LrgA-associated membrane protein LrgB
LrgA-associated membrane protein LrgB
CAC0610
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0610: Hypothetical protein
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_5005: Hypothetical protein
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0411: Hypothetical protein
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Hypothetical protein
Cbei_5004
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_5004: Transcriptional regulator, GntR family
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0410: Transcriptional regulator, GntR family
 
Clostridium kluyveri DSM 555

Gene: CKL_2524: Transcriptional regulator, GntR family
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Transcriptional regulator, GntR family
 
CRON 21.
gntR
*
Clostridium acetobutylicum ATCC 824

Site:
position = -61
score = 4.38875
sequence = ATGAAATCGATTATAA

Gene: CAC2851: Transcriptional regulator, GntR family
 
Clostridium beijerincki NCIMB 8052
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -122
score = 4.02037
sequence = TAAAAAATGTTAAATT

Gene: CBO0513: Transcriptional regulator, GntR family
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555

Gene: CKL_2798: Transcriptional regulator, GntR family
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC00893: Transcriptional regulator, GntR family
Transcriptional regulator, GntR family
 
CRON 22.
CAC2689
*
Clostridium acetobutylicum ATCC 824

Site:
position = -148
score = 4.42836
sequence = ATGAAAACGTATATAA

Gene: CAC2689: Hypothetical protein
*
Clostridium beijerincki NCIMB 8052

Site:
position = -29
score = 4.28045
sequence = ATGATAACAATTTTAA

Gene: Cbei_1222: Hypothetical protein
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -106
score = 3.89975
sequence = CTGAAAATATTAATAT

Gene: CBO1767: Hypothetical protein
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555

Gene: CKL_2431: Hypothetical protein
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Hypothetical protein
 
CRON 23.
spoIVB
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2072: Stage IV sporulation protein B
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_1711: Stage IV sporulation protein B
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -168
score = 4.39129
sequence = ATGTAAATATTTTTTT

Gene: CBO1873: Stage IV sporulation protein B
 
Clostridium butyricum 5521

Gene: CBY_0610: Stage IV sporulation protein B
 
Clostridium kluyveri DSM 555

Gene: CKL_1236: Stage IV sporulation protein B
 
Clostridium novyi NT

Gene: NT01CX_1988: Stage IV sporulation protein B
 
Clostridium perfringens ATCC 13124

Gene: CPF_2068: Stage IV sporulation protein B
*
Clostridium tetani E88

Site:
position = -78
score = 4.65783
sequence = ATGAAAACATTTTATA

Gene: CTC01570: Stage IV sporulation protein B
Stage IV sporulation protein B
 
CRON 24.
lacR
*3
Clostridium acetobutylicum ATCC 824

Site:
position = -86
score = 4.11227
sequence = TTGAAAATGATACTAT

Gene: CAC2955: Lactose phosphotransferase system repressor lacR

Gene: CAC2950: Lactose phosphotransferase system repressor lacR

Site:
position = -134
score = 4.1033
sequence = ATGTAAACGAAAACAA

Site:
position = -77
score = 4.27574
sequence = TAGAAAACGATAACTA

Gene: CAC2966: Lactose phosphotransferase system repressor lacR
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -77
score = 4.20034
sequence = ATATTAACGTTTTTAT

Gene: CBY_2984: Lactose phosphotransferase system repressor lacR
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Lactose phosphotransferase system repressor lacR
CBY_2985
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -73
score = 3.92922
sequence = AAGTAAAAAAATTAAT

Gene: CBY_2985: PTS system, putative lactose-specific IIBC component (EC 2.7.1.69)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, putative lactose-specific IIBC component (EC 2.7.1.69)
CBY_2986
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_2986: PTS system, putative lactose-specific IIB component (EC 2.7.1.69)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, putative lactose-specific IIB component (EC 2.7.1.69)
CBY_2987
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_2987: PTS system, putative lactose-specific IIC component (EC 2.7.1.69)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, putative lactose-specific IIC component (EC 2.7.1.69)
lacA
*
Clostridium acetobutylicum ATCC 824

Site:
position = -38
score = 4.355
sequence = AAGTAAAAAATTTAAT

Gene: CAC2954: Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_2988: Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26)
lacB
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2953: Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_2989: Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26)
agaY
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2952: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-)
 
Clostridium beijerincki NCIMB 8052
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -154
score = 3.95786
sequence = TTAAAAAATATATAAA

Gene: CBO0193: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-)
 
Clostridium butyricum 5521

Gene: CBY_2990: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-)
 
Clostridium kluyveri DSM 555

Gene: CKL_3599: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-)
*2
Clostridium novyi NT

Gene: NT01CX_0290: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-)

Site:
position = -156
score = 4.20501
sequence = TTTAAAAAAATTTTTT

Gene: NT01CX_1380: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-)
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC00341: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-)
Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-)
lacC
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2951: Tagatose-6-phosphate kinase (EC 2.7.1.144)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_2991: Tagatose-6-phosphate kinase (EC 2.7.1.144)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT

Gene: NT01CX_0289: Tagatose-6-phosphate kinase (EC 2.7.1.144)
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Tagatose-6-phosphate kinase (EC 2.7.1.144)
agaS
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
*
Clostridium novyi NT

Site:
position = -75
score = 4.12843
sequence = ATAAAAATAATTTTTT

Gene: NT01CX_0292: Galactosamine-6-phosphate isomerase
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Galactosamine-6-phosphate isomerase
nagA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT

Gene: NT01CX_0291: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
galM
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_2992: Predicted galactose mutarotase
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT

Gene: NT01CX_0288: Predicted galactose mutarotase
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted galactose mutarotase
lacF
*
Clostridium acetobutylicum ATCC 824

Site:
position = -32
score = 4.1743
sequence = ATAAAAATTATTTAAA

Gene: CAC2965: PTS system, lactose-specific IIA component (EC 2.7.1.69)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, lactose-specific IIA component (EC 2.7.1.69)
lacE
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2964: PTS system, lactose-specific IIBC component (EC 2.7.1.69)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, lactose-specific IIBC component (EC 2.7.1.69)
lacG
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2963: 6-phospho-beta-galactosidase (EC 3.2.1.85)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
6-phospho-beta-galactosidase (EC 3.2.1.85)
 
CRON 25.
araE
*
Clostridium acetobutylicum ATCC 824

Site:
position = -91
score = 4.68518
sequence = ATGAAAACGTTATATA

Gene: CAC1339: Arabinose-proton symporter
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Arabinose-proton symporter
 
CRON 26.
msmE
*
Clostridium acetobutylicum ATCC 824

Site:
position = -45
score = 4.85898
sequence = ATGTAAACGATTTAAT

Gene: CAC3672: Multiple sugar ABC transporter, substrate-binding protein MsmE
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Multiple sugar ABC transporter, substrate-binding protein MsmE
msmF
 
Clostridium acetobutylicum ATCC 824

Gene: CAC3671: Multiple sugar ABC transporter, membrane-spanning permease protein MsmF
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0733: Multiple sugar ABC transporter, membrane-spanning permease protein MsmF
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Multiple sugar ABC transporter, membrane-spanning permease protein MsmF
msmG
 
Clostridium acetobutylicum ATCC 824

Gene: CAC3670: Multiple sugar ABC transporter, membrane-spanning permease protein MsmG
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0734: Multiple sugar ABC transporter, membrane-spanning permease protein MsmG
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Multiple sugar ABC transporter, membrane-spanning permease protein MsmG
 
CRON 27.
serB
*
Clostridium acetobutylicum ATCC 824

Site:
position = -66
score = 3.94817
sequence = ATAATAAAATTATAAT

Gene: CAC0263: Phosphoserine phosphatase (EC 3.1.3.3)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_1022: Phosphoserine phosphatase (EC 3.1.3.3)
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO1079: Phosphoserine phosphatase (EC 3.1.3.3)
 
Clostridium butyricum 5521

Gene: CBY_2747: Phosphoserine phosphatase (EC 3.1.3.3)
*
Clostridium kluyveri DSM 555

Site:
position = -113
score = 3.97703
sequence = TTTTAAAAAATATATT

Gene: CKL_1551: Phosphoserine phosphatase (EC 3.1.3.3)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1375: Phosphoserine phosphatase (EC 3.1.3.3)
*
Clostridium tetani E88

Site:
position = -55
score = 4.46253
sequence = ATTAAAATGATATAAT

Gene: CTC00969: Phosphoserine phosphatase (EC 3.1.3.3)
Phosphoserine phosphatase (EC 3.1.3.3)
CAC0987
*
Clostridium acetobutylicum ATCC 824

Site:
position = -155
score = 4.64337
sequence = ATGAAAAAAATTACAT

Gene: CAC0987: Hypothetical protein
 
Clostridium beijerincki NCIMB 8052
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -154
score = 4.15647
sequence = AATTAAAAGATATAAT

Site:
position = -131
score = 4.01886
sequence = AGGAAAAAAATATTAT

Site:
position = -87
score = 4.00553
sequence = ATATAAATTATTAAAA

Gene: CBO1090: Hypothetical protein
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555

Gene: CKL_1552: Hypothetical protein
*
Clostridium novyi NT

Site:
position = -56
score = 4.12976
sequence = AATAAAAATATTAAAT

Gene: NT01CX_1593: Hypothetical protein
*
Clostridium perfringens ATCC 13124

Site:
position = -98
score = 4.05699
sequence = AATTAAAAATTTAATT

Gene: CPF_1911: Hypothetical protein
 
Clostridium tetani E88

Gene: CTC00970: Hypothetical protein
Hypothetical protein
lldR
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC00971: Transcription regulator of lactate utilization, GntR family
Transcription regulator of lactate utilization, GntR family
glcA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -177
score = 4.09829
sequence = ATAAAAAAAATTTTTA

Site:
position = -149
score = 4.80716
sequence = TTGAAAACGTTATAAT

Gene: CBO1005: L-lactate permease
*
Clostridium butyricum 5521

Site:
position = -223
score = 4.08912
sequence = TTGAAAAAATTTTAGT

Site:
position = -130
score = 4.096
sequence = AAGAAATAAATTTAAT

Gene: CBY_3256: L-lactate permease
 
Clostridium kluyveri DSM 555
*
Clostridium novyi NT

Site:
position = -124
score = 4.13412
sequence = TTTTAAATGTTAATAA

Site:
position = -32
score = 4.24629
sequence = AAGTAAAAAATTAAAA

Gene: NT01CX_1609: L-lactate permease
 
Clostridium perfringens ATCC 13124

Gene: CPF_0307: L-lactate permease
 
Clostridium tetani E88

Gene: CTC00972: L-lactate permease
L-lactate permease
CAC0988
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0988: Probably membrane protein
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Probably membrane protein
CAC0769
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -126
score = 3.98803
sequence = AAAAAAATATTTATAA

Site:
position = -92
score = 4.80266
sequence = ATGAAAACATTTAAAT

Gene: Cbei_2495: Predicted uronate isomerase
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO1006: Predicted uronate isomerase
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted uronate isomerase
CAC0767
*
Clostridium acetobutylicum ATCC 824

Site:
position = -37
score = 4.57406
sequence = ATAAAAAAGTTTAAAA

Gene: CAC0767: Fe-S oxidoreductase
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555

Gene: CKL_0330: Fe-S oxidoreductase
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Fe-S oxidoreductase
CAC2547
*
Clostridium acetobutylicum ATCC 824

Site:
position = -193
score = 4.3302
sequence = TTAAAAAAGATTAATA

Site:
position = -124
score = 4.30524
sequence = AAGTAAACGATAATAT

Gene: CAC2547: Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain
*3
Clostridium beijerincki NCIMB 8052

Site:
position = -156
score = 4.09074
sequence = TGGTAAAAGTTAATAT

Site:
position = -139
score = 3.93093
sequence = ATTAAAATTATAATAA

Site:
position = -41
score = 4.00504
sequence = TTATAAATATTTAATA

Gene: Cbei_2912: Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain

Site:
position = -134
score = 4.42722
sequence = ATGAAAATATTATATT

Gene: Cbei_4918: Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain

Gene: Cbei_0287: Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1704: Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain
 
CRON 28.
amyA
*
Clostridium acetobutylicum ATCC 824

Site:
position = 20
score = 4.1882
sequence = AAGAAAAAGCTTACTT

Site:
position = 86
score = 4.23205
sequence = AAGTAATCGTTTTCAA

Gene: CAP0098: Alpha-amylase (EC 3.2.1.1)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Alpha-amylase (EC 3.2.1.1)
 
CRON 29.
xylS2
*2
Clostridium acetobutylicum ATCC 824

Site:
position = 120
score = 4.5881
sequence = ATGAAAACGATATCTA

Gene: CAC2252: Alpha-xylosidase (EC 3.2.1.177)

Gene: CAC2891: Alpha-xylosidase (EC 3.2.1.177)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Alpha-xylosidase (EC 3.2.1.177)
 
CRON 30.
mglB
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4428: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1717: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
*
Clostridium tetani E88

Site:
position = 42
score = 4.78939
sequence = ATGAAAAAGATTATAT

Gene: CTC00860: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
mglA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC00861: Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)
Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)
mglC
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC00862: Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)
Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)
galR
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2962: Transcription regulator of galactose utilization, LacI family
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4422: Transcription regulator of galactose utilization, LacI family
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1723: Transcription regulator of galactose utilization, LacI family
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC00863: Transcription regulator of galactose utilization, LacI family
Transcription regulator of galactose utilization, LacI family
galT
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2961: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4421: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1724: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC00864: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
galK
*
Clostridium acetobutylicum ATCC 824

Site:
position = 55
score = 4.829
sequence = ATGAAAATGTTTTCTT

Gene: CAC2959: Galactokinase (EC 2.7.1.6)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4419: Galactokinase (EC 2.7.1.6)
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = 55
score = 4.33111
sequence = CTGAAAATGTTTTCTT

Gene: CBY_1726: Galactokinase (EC 2.7.1.6)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC00865: Galactokinase (EC 2.7.1.6)
Galactokinase (EC 2.7.1.6)
galE
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2960: UDP-glucose 4-epimerase (EC 5.1.3.2)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4420: UDP-glucose 4-epimerase (EC 5.1.3.2)
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO2777: UDP-glucose 4-epimerase (EC 5.1.3.2)
 2
Clostridium butyricum 5521

Gene: CBY_1725: UDP-glucose 4-epimerase (EC 5.1.3.2)

Gene: CBY_4171: UDP-glucose 4-epimerase (EC 5.1.3.2)
 
Clostridium kluyveri DSM 555

Gene: CKL_1547: UDP-glucose 4-epimerase (EC 5.1.3.2)
 
Clostridium novyi NT

Gene: NT01CX_1536: UDP-glucose 4-epimerase (EC 5.1.3.2)
 
Clostridium perfringens ATCC 13124

Gene: CPF_0282: UDP-glucose 4-epimerase (EC 5.1.3.2)
 
Clostridium tetani E88

Gene: CTC00866: UDP-glucose 4-epimerase (EC 5.1.3.2)
UDP-glucose 4-epimerase (EC 5.1.3.2)
 
CRON 31.
ccpA
*
Clostridium acetobutylicum ATCC 824

Site:
position = -78
score = 4.21606
sequence = TATAAAAAGATTATAA

Gene: CAC3037: Catabolite control protein A, LacI family
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0047: Catabolite control protein A, LacI family
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO0100: Catabolite control protein A, LacI family
 
Clostridium butyricum 5521

Gene: CBY_2264: Catabolite control protein A, LacI family
 
Clostridium kluyveri DSM 555

Gene: CKL_3751: Catabolite control protein A, LacI family
*
Clostridium novyi NT

Site:
position = -61
score = 4.36223
sequence = TTTTAAATGTTTTATA

Gene: NT01CX_0643: Catabolite control protein A, LacI family
*
Clostridium perfringens ATCC 13124

Site:
position = -138
score = 4.14548
sequence = TTGAAAAAAAATTAAA

Site:
position = -152
score = 4.63723
sequence = AAGAAAACGTTTTTTT

Gene: CPF_2863: Catabolite control protein A, LacI family
*
Clostridium tetani E88

Site:
position = -122
score = 4.07717
sequence = TTATAAATAATTTAAA

Gene: CTC00263: Catabolite control protein A, LacI family
Catabolite control protein A, LacI family
 
CRON 32.
oppA
*
Clostridium acetobutylicum ATCC 824

Site:
position = 112
score = 4.51939
sequence = TAGAAAACGTTATAAA

Gene: CAC0176: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_2555: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
 
Clostridium tetani E88
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
oppB
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0177: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_2554: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
 
Clostridium tetani E88
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
oppC
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0178: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_2553: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
 
Clostridium tetani E88
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
oppD
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0179: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_2552: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
 
Clostridium tetani E88
Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
oppF
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0180: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_2551: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
 
Clostridium tetani E88
Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
 
CRON 33.
clpB
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0959: ATP-dependent chaperone ClpB
*
Clostridium beijerincki NCIMB 8052

Site:
position = -151
score = 4.34817
sequence = ATAAAAAAATTTAAAA

Site:
position = -253
score = 4.40464
sequence = TTAAAAAAGTTTAATA

Gene: Cbei_0645: ATP-dependent chaperone ClpB
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -52
score = 4.14964
sequence = ATAAAAAAATTAAAAA

Site:
position = -76
score = 4.63902
sequence = TTGAAAATATTTAAAT

Gene: CBO0409: ATP-dependent chaperone ClpB
 
Clostridium butyricum 5521

Gene: CBY_3692: ATP-dependent chaperone ClpB
*
Clostridium kluyveri DSM 555

Site:
position = -30
score = 4.17463
sequence = AAGAAAAAGTTTTATG

Gene: CKL_2702: ATP-dependent chaperone ClpB
 
Clostridium novyi NT

Gene: NT01CX_2301: ATP-dependent chaperone ClpB
*
Clostridium perfringens ATCC 13124

Site:
position = -148
score = 4.32487
sequence = ATATAAATGATTTATT

Gene: CPF_1681: ATP-dependent chaperone ClpB
 
Clostridium tetani E88

Gene: CTC00536: ATP-dependent chaperone ClpB
ATP-dependent chaperone ClpB
 
CRON 34.
yvbX
*
Clostridium acetobutylicum ATCC 824

Site:
position = 43
score = 4.16236
sequence = TTGTAATCATTTTCAA

Gene: CAC1556: Putative peptidoglycan hydrolase YvbX, not involved in spore germination
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO1212: Putative peptidoglycan hydrolase YvbX, not involved in spore germination
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Putative peptidoglycan hydrolase YvbX, not involved in spore germination
 
CRON 35.
YkgB
*
Clostridium acetobutylicum ATCC 824

Site:
position = 10
score = 4.47418
sequence = ATGAAAAGGTTTATAT

Gene: CAC0086: Predicted 6-phosphogluconolactonase
*
Clostridium beijerincki NCIMB 8052

Site:
position = -103
score = 4.20453
sequence = AATTAAATGATTAAAA

Gene: Cbei_1278: Predicted 6-phosphogluconolactonase
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_3417: Predicted 6-phosphogluconolactonase
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1232: Predicted 6-phosphogluconolactonase
 
Clostridium tetani E88
Predicted 6-phosphogluconolactonase
 
CRON 36.
kdpA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -250
score = 4.32654
sequence = ATGTAAATGTTTTAAG

Gene: CBY_3688: Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1210: Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)
 
Clostridium tetani E88
Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)
kdpB
 
Clostridium acetobutylicum ATCC 824

Gene: CAC3681: Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_3687: Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)
 
Clostridium kluyveri DSM 555

Gene: CKL_1472: Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1211: Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)
 
Clostridium tetani E88
Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)
kdpC
 
Clostridium acetobutylicum ATCC 824

Gene: CAC3680: Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_3686: Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)
 
Clostridium kluyveri DSM 555

Gene: CKL_1473: Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1212: Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)
 
Clostridium tetani E88
Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)
CBY_3685
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_3685: hypothetical protein
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Hypothetical protein
kdpD
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_3684: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
 
Clostridium kluyveri DSM 555

Gene: CKL_1469: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
kdpE
 
Clostridium acetobutylicum ATCC 824

Gene: CAC3677: Transcription regulator of potassium transport, OmpR family
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_2028: Transcription regulator of potassium transport, OmpR family
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_3683: Transcription regulator of potassium transport, OmpR family
 2
Clostridium kluyveri DSM 555

Gene: CKL_1470: Transcription regulator of potassium transport, OmpR family

Gene: CKL_2262: Transcription regulator of potassium transport, OmpR family
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1214: Transcription regulator of potassium transport, OmpR family
 
Clostridium tetani E88
Transcription regulator of potassium transport, OmpR family
kdpA/atkA
*
Clostridium acetobutylicum ATCC 824

Site:
position = -332
score = 4.55864
sequence = TTGAAAACATTATCAT

Gene: CAC3682: Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
*
Clostridium kluyveri DSM 555

Site:
position = -327
score = 3.9741
sequence = TAGAAAATATTTCAAA

Gene: CKL_1471: Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)
kdpX
 
Clostridium acetobutylicum ATCC 824

Gene: CAC3679: Uncharacterized protein of kdp operon, kdpX
*
Clostridium beijerincki NCIMB 8052

Site:
position = -227
score = 4.56658
sequence = ATGAAAATTATTTAAT

Gene: Cbei_2026: Uncharacterized protein of kdp operon, kdpX
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Uncharacterized protein of kdp operon, kdpX
kdpD
 
Clostridium acetobutylicum ATCC 824

Gene: CAC3678: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_2027: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555

Gene: CKL_2263: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1213: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
 
Clostridium tetani E88
Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
 
CRON 37.
ptnA
*
Clostridium acetobutylicum ATCC 824

Site:
position = -321
score = 4.63959
sequence = ATGAAAACGTATTAAT

Gene: CAP0066: PTS system, mannose-specific IIBA component (EC 2.7.1.69)
*
Clostridium beijerincki NCIMB 8052

Site:
position = -374
score = 4.1437
sequence = ATAAAAATTATTTTAT

Gene: Cbei_0711: PTS system, mannose-specific IIBA component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -370
score = 4.16339
sequence = ATGAAAATAAATTAAA

Gene: CBY_1459: PTS system, mannose-specific IIBA component (EC 2.7.1.69)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -235
score = 4.50945
sequence = TTGAAAATTTTTTAAA

Gene: CPF_0818: PTS system, mannose-specific IIBA component (EC 2.7.1.69)
 
Clostridium tetani E88
PTS system, mannose-specific IIBA component (EC 2.7.1.69)
manY
 
Clostridium acetobutylicum ATCC 824

Gene: CAP0067: PTS system, mannose-specific IIC component (EC 2.7.1.69)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0712: PTS system, mannose-specific IIC component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1460: PTS system, mannose-specific IIC component (EC 2.7.1.69)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_0819: PTS system, mannose-specific IIC component (EC 2.7.1.69)
 
Clostridium tetani E88
PTS system, mannose-specific IIC component (EC 2.7.1.69)
ptnD
 
Clostridium acetobutylicum ATCC 824

Gene: CAP0068: PTS system, mannose-specific IID component (EC 2.7.1.69)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0713: PTS system, mannose-specific IID component (EC 2.7.1.69)
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -279
score = 3.93449
sequence = TATCAAATGTTTTAAA

Gene: CBO2845: PTS system, mannose-specific IID component (EC 2.7.1.69)
 
Clostridium butyricum 5521

Gene: CBY_1461: PTS system, mannose-specific IID component (EC 2.7.1.69)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_0820: PTS system, mannose-specific IID component (EC 2.7.1.69)
 
Clostridium tetani E88
PTS system, mannose-specific IID component (EC 2.7.1.69)
 
CRON 38.
CAC3648
*
Clostridium acetobutylicum ATCC 824

Site:
position = -341
score = 4.37425
sequence = TGGAAAACATTTTCAT

Gene: CAC3648: Acetyltransferase
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Acetyltransferase
 
CRON 39.
pbp
*
Clostridium acetobutylicum ATCC 824

Site:
position = -308
score = 4.55666
sequence = ATGATAATGTTTTCAA

Site:
position = -33
score = 4.28796
sequence = ATAAAAAATATTTAAT

Gene: CAC3683: Penicillin-binding protein
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_1900: Penicillin-binding protein
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_2678: Penicillin-binding protein
*
Clostridium kluyveri DSM 555

Site:
position = -154
score = 4.19348
sequence = ATTTAAATAATTTATT

Gene: CKL_2732: Penicillin-binding protein
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Penicillin-binding protein
 
CRON 40.
bglC
*
Clostridium acetobutylicum ATCC 824

Site:
position = -102
score = 4.20699
sequence = ATGTATACGATTTCTT

Site:
position = -38
score = 3.95396
sequence = AAGAAAAAATATTATA

Gene: CAC1084: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
xylS
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1085: Alpha-xylosidase (EC 3.2.1.177)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0772: Alpha-xylosidase (EC 3.2.1.177)
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -114
score = 4.15855
sequence = ATATAAAATTTTTAAA

Site:
position = -48
score = 4.03446
sequence = AATAAAAAATTATTAT

Gene: CBY_2409: Alpha-xylosidase (EC 3.2.1.177)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Alpha-xylosidase (EC 3.2.1.177)
 
CRON 41.
pelL
*
Clostridium acetobutylicum ATCC 824

Site:
position = -165
score = 4.15923
sequence = TTGTTAACGATAACAA

Gene: CAC0812: Predicted pectate lyase related protein, secreted
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted pectate lyase related protein, secreted
CAC0813
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0813: Hypothetical protein
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Hypothetical protein
 
CRON 42.
CAC3500
*
Clostridium acetobutylicum ATCC 824

Site:
position = -261
score = 4.34676
sequence = TTGAAAACGATTGTAT

Site:
position = -203
score = 3.93593
sequence = AAATAAACATTAAAAT

Gene: CAC3500: Anaerobic dicarboxylate transport protein
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Anaerobic dicarboxylate transport protein
frlC
 
Clostridium acetobutylicum ATCC 824

Gene: CAC3499: Predicted isomerase
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted isomerase
frlD
 
Clostridium acetobutylicum ATCC 824

Gene: CAC3498: Fructoselysine kinase (EC 2.7.1.-)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Fructoselysine kinase (EC 2.7.1.-)
 
CRON 43.
CAC1044
*
Clostridium acetobutylicum ATCC 824

Site:
position = -261
score = 4.36458
sequence = TTGATAACGTTATCTT

Gene: CAC1044: putative oxidoreductase
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
putative oxidoreductase
 
CRON 44.
yxkH
*
Clostridium acetobutylicum ATCC 824

Site:
position = -259
score = 4.05381
sequence = AAGATATCGTTTTCAA

Site:
position = -124
score = 3.91642
sequence = AAAATAATGTTATAAT

Gene: CAC0436: Possible polysaccharide deacetylase
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
*2
Clostridium novyi NT

Site:
position = -56
score = 4.08692
sequence = ATAATAAAGATTATAA

Site:
position = -32
score = 4.02018
sequence = ATTATAAAAATTAATT

Gene: NT01CX_1328: Possible polysaccharide deacetylase

Gene: NT01CX_0443: Possible polysaccharide deacetylase
 
Clostridium perfringens ATCC 13124
*
Clostridium tetani E88

Site:
position = -163
score = 4.10514
sequence = TTGAAATAGATATTAA

Gene: CTC01186: Possible polysaccharide deacetylase
Possible polysaccharide deacetylase
 
CRON 45.
CAC0635
*
Clostridium acetobutylicum ATCC 824

Site:
position = -197
score = 4.12632
sequence = TTTAATACGATTACAT

Gene: CAC0635: Hypothetical protein
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Hypothetical protein
 
CRON 46.
CAC0270
*
Clostridium acetobutylicum ATCC 824

Site:
position = 27
score = 4.03735
sequence = ATAAAAAAAATAAATT

Gene: CAC0270: Hypothetical protein
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Hypothetical protein
 
CRON 47.
licT
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
*
Clostridium botulinum A str. ATCC 3502

Site:
position = 58
score = 3.9719
sequence = AAGAAATAATTATAAT

Gene: CBO0654: Beta-glucoside bgl operon antiterminator, BglG family
*
Clostridium butyricum 5521

Site:
position = -170
score = 4.23301
sequence = ATGTAAAAAATAATAT

Site:
position = -147
score = 4.12182
sequence = TTGACAACGTTTTCTA

Gene: CBY_4099: Beta-glucoside bgl operon antiterminator, BglG family
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Beta-glucoside bgl operon antiterminator, BglG family
bglP
*
Clostridium acetobutylicum ATCC 824

Site:
position = 49
score = 4.08861
sequence = AAGAAAACGTTAACAG

Gene: CAC1407: PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69)
*
Clostridium beijerincki NCIMB 8052

Site:
position = -141
score = 4.10866
sequence = TTTAAAAAGAATAAAA

Site:
position = 49
score = 4.00874
sequence = AAGAAAACGTTAATAG

Gene: Cbei_3273: PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502
*2
Clostridium butyricum 5521

Site:
position = -42
score = 4.30388
sequence = ATAAAAATAATTAAAT

Gene: CBY_1093: PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69)

Gene: CBY_4098: PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69)
bglH2
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1408: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_3271: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_4097: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
Cbei_3272
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = 0
score = 4.18331
sequence = ATGAAAAAAATAATTA

Gene: Cbei_3272: Putative secreted hydrolase
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Putative secreted hydrolase
 
CRON 48.
mtlA
*
Clostridium acetobutylicum ATCC 824

Site:
position = -112
score = 3.93146
sequence = TTGAAAACGTATACCA

Gene: CAC0154: PTS system, mannitol-specific IIBC component (EC 2.7.1.69)
*
Clostridium beijerincki NCIMB 8052

Site:
position = -86
score = 3.99566
sequence = TTGAAAAGGTATTCTT

Gene: Cbei_0242: PTS system, mannitol-specific IIBC component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, mannitol-specific IIBC component (EC 2.7.1.69)
 
CRON 49.
CAC0019
*
Clostridium acetobutylicum ATCC 824

Site:
position = -88
score = 3.99602
sequence = ATGAAATCACTTTCAT

Gene: CAC0019: Transcriptional regulator, TetR family
*
Clostridium beijerincki NCIMB 8052

Site:
position = 85
score = 4.18428
sequence = ATGAAAAAGGTTATTA

Gene: Cbei_3335: Transcriptional regulator, TetR family
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Transcriptional regulator, TetR family
 
CRON 50.
CAC0423
*
Clostridium acetobutylicum ATCC 824

Site:
position = -249
score = 4.24779
sequence = AATTAAAAGTTTTATA

Gene: CAC0423: PTS system, sucrose-specific IIBCA component (EC 2.7.1.69)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, sucrose-specific IIBCA component (EC 2.7.1.69)
scrK
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0424: Fructokinase (EC 2.7.1.4)
 2
Clostridium beijerincki NCIMB 8052

Gene: Cbei_3876: Fructokinase (EC 2.7.1.4)

Gene: Cbei_5009: Fructokinase (EC 2.7.1.4)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_3745: Fructokinase (EC 2.7.1.4)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 2
Clostridium perfringens ATCC 13124

Gene: CPF_0734: Fructokinase (EC 2.7.1.4)

Gene: CPF_1782: Fructokinase (EC 2.7.1.4)
 
Clostridium tetani E88
Fructokinase (EC 2.7.1.4)
sacA
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0425: Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
scrR
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -37
score = 3.96562
sequence = ATAATAATATTTATAT

Gene: Cbei_5011: Sucrose operon repressor ScrR, LacI family
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_3743: Sucrose operon repressor ScrR, LacI family
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1784: Sucrose operon repressor ScrR, LacI family
 
Clostridium tetani E88
Sucrose operon repressor ScrR, LacI family
scrB
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_5010: Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_3744: Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1783: Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
 
Clostridium tetani E88
Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
CPF_0733
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -95
score = 4.03419
sequence = AATAAAAATATTTCTT

Site:
position = -57
score = 4.27552
sequence = ATGTAAATGTTTAACT

Gene: CPF_0733: Predicted sucrose transporter
 
Clostridium tetani E88
Predicted sucrose transporter
 
CRON 51.
eglA
*
Clostridium acetobutylicum ATCC 824

Site:
position = -76
score = 3.91006
sequence = CAGATAACGTTTACAA

Gene: CAC0706: Endo-1,4-beta glucanase (EC 3.2.1.4) (fused to two ricin-B-like domains)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Endo-1,4-beta glucanase (EC 3.2.1.4) (fused to two ricin-B-like domains)
 
CRON 52.
bglH
*
Clostridium acetobutylicum ATCC 824

Site:
position = -151
score = 3.88818
sequence = ATGATAACCTTATCAT

Gene: CAC0743: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
*
Clostridium beijerincki NCIMB 8052

Site:
position = -61
score = 4.2055
sequence = ATATAAACATTTTATA

Gene: Cbei_2832: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
 
CRON 53.
arb43
*
Clostridium acetobutylicum ATCC 824

Site:
position = -94
score = 3.9541
sequence = TTGAGAAAGATAAAAT

Site:
position = 7
score = 4.27959
sequence = ATGAAAAAATATTAAA

Gene: CAC1529: Alpha-L-arabinofuranosidase II precursor (EC 3.2.1.55)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Alpha-L-arabinofuranosidase II precursor (EC 3.2.1.55)
araT
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1530: Putative arabinoside transporter
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Putative arabinoside transporter
 
CRON 54.
CAC1457
*
Clostridium acetobutylicum ATCC 824

Site:
position = -118
score = 4.13668
sequence = ATTAAAATATTATTAA

Gene: CAC1457: PTS system, fructose- and mannose-inducible IIA component (EC 2.7.1.69)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, fructose- and mannose-inducible IIA component (EC 2.7.1.69)
CAC1458
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1458: PTS system, fructose- and mannose-inducible IIB component (EC 2.7.1.69)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, fructose- and mannose-inducible IIB component (EC 2.7.1.69)
CAC1459
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1459: PTS system, fructose- and mannose-inducible IIC component (EC 2.7.1.69)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, fructose- and mannose-inducible IIC component (EC 2.7.1.69)
CAC1460
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1460: PTS system, fructose- and mannose-inducible IID component (EC 2.7.1.69)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, fructose- and mannose-inducible IID component (EC 2.7.1.69)
CAC1461
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1461: PTS system, fructose- and mannose-inducible putative EII component
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, fructose- and mannose-inducible putative EII component
 
CRON 55.
glcK
*
Clostridium acetobutylicum ATCC 824

Site:
position = -349
score = 4.0056
sequence = AAGAAAATTATAAATT

Gene: CAC2613: Glucokinase (EC 2.7.1.2)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4895: Glucokinase (EC 2.7.1.2)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
*
Clostridium tetani E88

Site:
position = -286
score = 4.31857
sequence = TAGAAAAAAATTAAAA

Gene: CTC00230: Glucokinase (EC 2.7.1.2)
Glucokinase (EC 2.7.1.2)
 
CRON 56.
CAC2810
*
Clostridium acetobutylicum ATCC 824

Site:
position = -32
score = 4.1642
sequence = TTGTTAAAAATTAAAT

Gene: CAC2810: Possible secreted glucoamylase
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Possible secreted glucoamylase
 
CRON 57.
xynT
*
Clostridium acetobutylicum ATCC 824

Site:
position = -41
score = 3.91801
sequence = TTGAAAACGTTTAGTG

Gene: CAC3422: Xyloside transporter XynT
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Xyloside transporter XynT
 
CRON 58.
ptgA
*
Clostridium acetobutylicum ATCC 824

Site:
position = 3
score = 4.08092
sequence = TTTAAAAAATTATTTT

Gene: CAC3427: PTS system, glucose-specific IIA component (EC 2.7.1.69)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, glucose-specific IIA component (EC 2.7.1.69)
 
CRON 59.
xynT
*
Clostridium acetobutylicum ATCC 824

Site:
position = -69
score = 4.35898
sequence = TTGAAAAAGTTTGTAT

Site:
position = -35
score = 4.39776
sequence = ATGTAAATAATTACAA

Gene: CAC3451: Xyloside transporter XynT
*
Clostridium beijerincki NCIMB 8052

Site:
position = -41
score = 4.18124
sequence = AAGAAAAATATTATAA

Gene: Cbei_4125: Xyloside transporter XynT
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Xyloside transporter XynT
xynD
 
Clostridium acetobutylicum ATCC 824

Gene: CAC3452: Beta-xylosidase (EC 3.2.1.37)
*
Clostridium beijerincki NCIMB 8052

Site:
position = -142
score = 4.04734
sequence = TTGTAAACGATTATTG

Site:
position = -35
score = 3.89789
sequence = TAATAAATATTTTATT

Gene: Cbei_4126: Beta-xylosidase (EC 3.2.1.37)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Beta-xylosidase (EC 3.2.1.37)
 
CRON 60.
manB
*3
Clostridium acetobutylicum ATCC 824

Site:
position = -147
score = 4.26624
sequence = TTGTAAATTATTAAAA

Gene: CAC0538: Beta-mannanase ManB-like enzyme

Site:
position = -58
score = 4.15418
sequence = ATAAAAACTTTATAAA

Gene: CAC0539: Beta-mannanase ManB-like enzyme

Gene: CAC0540: Beta-mannanase ManB-like enzyme
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Beta-mannanase ManB-like enzyme
 
CRON 61.
gamP
*
Clostridium acetobutylicum ATCC 824

Site:
position = -31
score = 4.02533
sequence = ATTTTAAAGATAAAAT

Gene: CAC0570: PTS system, predicted glucoseamine-specific IICBA component
 
Clostridium beijerincki NCIMB 8052
*
Clostridium botulinum A str. ATCC 3502

Site:
position = 0
score = 4.37426
sequence = TTGAAAAATATTTTAA

Gene: CBO2754: PTS system, predicted glucoseamine-specific IICBA component
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 2
Clostridium novyi NT

Gene: NT01CX_0332: PTS system, predicted glucoseamine-specific IICBA component

Gene: NT01CX_1858: PTS system, predicted glucoseamine-specific IICBA component
 
Clostridium perfringens ATCC 13124
*
Clostridium tetani E88

Site:
position = -29
score = 4.07941
sequence = TTTAAAAAAATAATAT

Site:
position = 0
score = 4.09058
sequence = ATGAAAAAGCTATTTA

Gene: CTC00278: PTS system, predicted glucoseamine-specific IICBA component
PTS system, predicted glucoseamine-specific IICBA component
 
CRON 62.
nagE
*
Clostridium acetobutylicum ATCC 824

Site:
position = -219
score = 4.06961
sequence = TTGTAAACGATGTAAA

Gene: CAC1353: PTS system, N-acetylglucosamine-specific IIBC component (EC 2.7.1.69)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO2839: PTS system, N-acetylglucosamine-specific IIBC component (EC 2.7.1.69)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -116
score = 4.01994
sequence = TAGATAACTTTTATAT

Gene: CPF_0071: PTS system, N-acetylglucosamine-specific IIBC component (EC 2.7.1.69)
 
Clostridium tetani E88
PTS system, N-acetylglucosamine-specific IIBC component (EC 2.7.1.69)
 
CRON 63.
CAC1354
*
Clostridium acetobutylicum ATCC 824

Site:
position = -197
score = 4.52842
sequence = ATGAAAAAAATTTTAA

Gene: CAC1354: PTS system, predicted maltose-specific IIA component (EC 2.7.1.69)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO2837: PTS system, predicted maltose-specific IIA component (EC 2.7.1.69)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, predicted maltose-specific IIA component (EC 2.7.1.69)
 
CRON 64.
Cbei_3309
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_3309: Uncharacterized ABC transporter, ATP-binding protein
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -77
score = 4.07055
sequence = TTGAAATAAATTTATA

Gene: CBY_2354: Uncharacterized ABC transporter, ATP-binding protein
*
Clostridium kluyveri DSM 555

Site:
position = -77
score = 4.1417
sequence = TTTAAAATTATTATAT

Gene: CKL_2172: Uncharacterized ABC transporter, ATP-binding protein
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Uncharacterized ABC transporter, ATP-binding protein
Cbei_3308
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_3308: Uncharacterized ABC transporter, ATP-binding and permease protein
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_2355: Uncharacterized ABC transporter, ATP-binding and permease protein
 
Clostridium kluyveri DSM 555

Gene: CKL_2171: Uncharacterized ABC transporter, ATP-binding and permease protein
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Uncharacterized ABC transporter, ATP-binding and permease protein
 
CRON 65.
aspC1
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2832: Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4794: Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57)
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -50
score = 4.07681
sequence = ATGTTAAAGATAATAA

Site:
position = -94
score = 4.53644
sequence = ATGAAAAATATTTAAA

Site:
position = -224
score = 4.11118
sequence = ATATAAAAAATTATAT

Gene: CBO1014: Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57)
 
Clostridium butyricum 5521

Gene: CBY_3855: Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57)
 
Clostridium kluyveri DSM 555

Gene: CKL_0889: Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57)
*
Clostridium novyi NT

Site:
position = -128
score = 4.13448
sequence = CTGTAAACGTTATTAT

Gene: NT01CX_0284: Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57)
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57)
 
CRON 66.
fucI
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -73
score = 4.74078
sequence = AAGAAAACGTTTAAAA

Gene: CBY_1564: L-fucose isomerase
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -93
score = 4.71017
sequence = AAGAAAACGTTTATAT

Gene: CPF_1048: L-fucose isomerase (EC 5.3.1.25)
 
Clostridium tetani E88
L-fucose isomerase (EC 5.3.1.25)
fucK
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1565: rhamnulokinase
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1049: L-fuculokinase( EC:2.7.1.51 )
 
Clostridium tetani E88
L-fuculokinase( EC:2.7.1.51 )
fucU
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1566: L-fucose mutarotase (EC 5.1.3.n2)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1050: L-fucose mutarotase (EC 5.1.3.n2)
 
Clostridium tetani E88
L-fucose mutarotase (EC 5.1.3.n2)
fucA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1567: L-fuculose phosphate aldolase (EC 4.1.2.17)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1051: L-fuculose phosphate aldolase (EC 4.1.2.17)
 
Clostridium tetani E88
L-fuculose phosphate aldolase (EC 4.1.2.17)
fucP
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1568: L-fucose:H+ symporter permease
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1052: L-fucose:H+ symporter permease
 
Clostridium tetani E88
L-fucose:H+ symporter permease
 
CRON 67.
CPF_2879
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -19
score = 4.18097
sequence = TTGTTAAATTTTTAAT

Gene: CPF_2879: hypothetical protein
 
Clostridium tetani E88
hypothetical protein
glpF
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1319: Glycerol uptake facilitator protein
*
Clostridium beijerincki NCIMB 8052

Site:
position = -132
score = 4.42262
sequence = TTTAAAACTTTTAAAT

Gene: Cbei_4511: Glycerol uptake facilitator protein
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -150
score = 4.25003
sequence = TTGAAAACGTAAACAA

Gene: CBO2785: Glycerol uptake facilitator protein
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
*2
Clostridium novyi NT

Site:
position = -107
score = 4.19344
sequence = TATAAAAAGTTATATT

Gene: NT01CX_0606: Glycerol uptake facilitator protein

Site:
position = -104
score = 4.19688
sequence = ATACAAACGTTTTCAA

Gene: NT01CX_0609: Glycerol uptake facilitator protein
*2
Clostridium perfringens ATCC 13124

Site:
position = -60
score = 4.00704
sequence = TATTAAATGTTTATTA

Gene: CPF_1170: Glycerol uptake facilitator protein

Gene: CPF_2878: Glycerol uptake facilitator protein
*
Clostridium tetani E88

Site:
position = -32
score = 3.84082
sequence = AATTAAATATTTATTA

Gene: CTC01996: Glycerol uptake facilitator protein
Glycerol uptake facilitator protein
glpP
*
Clostridium acetobutylicum ATCC 824

Site:
position = -26
score = 4.09907
sequence = AGGATAATGTTTACTT

Gene: CAC1320: Glycerol uptake operon antiterminator regulatory protein
*
Clostridium beijerincki NCIMB 8052

Site:
position = -26
score = 4.48972
sequence = AAGAAAACAATTACAT

Gene: Cbei_4510: Glycerol uptake operon antiterminator regulatory protein
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -33
score = 4.21352
sequence = ATTAAAAAATTAATAT

Gene: CBO2768: Glycerol uptake operon antiterminator regulatory protein
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_2877: Glycerol uptake operon antiterminator regulatory protein
 
Clostridium tetani E88

Gene: CTC01759: Glycerol uptake operon antiterminator regulatory protein
Glycerol uptake operon antiterminator regulatory protein
glpK
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1321: Glycerol kinase (EC 2.7.1.30)
*
Clostridium beijerincki NCIMB 8052

Site:
position = -73
score = 3.86364
sequence = ATATAAATAATAAATT

Gene: Cbei_4509: Glycerol kinase (EC 2.7.1.30)
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -77
score = 4.26213
sequence = TTTTAAAAGATTATTT

Gene: CBO2784: Glycerol kinase (EC 2.7.1.30)
 
Clostridium butyricum 5521

Gene: CBY_0952: Glycerol kinase (EC 2.7.1.30)
 
Clostridium kluyveri DSM 555
*2
Clostridium novyi NT

Gene: NT01CX_0605: Glycerol kinase (EC 2.7.1.30)

Site:
position = -54
score = 3.88151
sequence = ATGAAAAATAAATTAT

Gene: NT01CX_0608: Glycerol kinase (EC 2.7.1.30)
 
Clostridium perfringens ATCC 13124

Gene: CPF_2876: Glycerol kinase (EC 2.7.1.30)
*2
Clostridium tetani E88

Gene: CTC01758: Glycerol kinase (EC 2.7.1.30)

Site:
position = -143
score = 4.19032
sequence = TTGAAATCATTATAAT

Gene: CTC02462: Glycerol kinase (EC 2.7.1.30)
Glycerol kinase (EC 2.7.1.30)
glpA
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1322: Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
*
Clostridium beijerincki NCIMB 8052

Site:
position = -143
score = 3.9126
sequence = AAGTATACATTTACAT

Gene: Cbei_4508: Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0953: Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_2875: Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
 
Clostridium tetani E88
Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
dhaK
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -52
score = 4.03433
sequence = ATATAAATAATTTTAA

Gene: Cbei_2148: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
 
Clostridium botulinum A str. ATCC 3502
*2
Clostridium butyricum 5521

Site:
position = -96
score = 4.232
sequence = ATGAAATAGTTATATA

Gene: CBY_3691: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK

Gene: CBY_0507: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
 
Clostridium kluyveri DSM 555
*
Clostridium novyi NT

Site:
position = -33
score = 4.01754
sequence = TATAAAAGGTTTTCAA

Gene: NT01CX_0689: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
 
Clostridium perfringens ATCC 13124
*
Clostridium tetani E88

Site:
position = -169
score = 4.28791
sequence = ATTAAAAATATTTCAA

Gene: CTC01762: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
dhaM
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_2149: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
 
Clostridium botulinum A str. ATCC 3502
 2
Clostridium butyricum 5521

Gene: CBY_3690: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL

Gene: CBY_0506: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
 
Clostridium kluyveri DSM 555

Gene: CKL_0697: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
 
Clostridium novyi NT

Gene: NT01CX_0688: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC01761: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
dhaL
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_2150: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
 
Clostridium botulinum A str. ATCC 3502
 2
Clostridium butyricum 5521

Gene: CBY_3689: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component

Gene: CBY_0505: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
 
Clostridium kluyveri DSM 555

Gene: CKL_0698: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
 
Clostridium novyi NT

Gene: NT01CX_0687: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC01760: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
gldA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -70
score = 3.94366
sequence = ATGTAAACGATATTAC

Site:
position = -36
score = 3.88242
sequence = AATAAAAATATTTTTA

Gene: CBO0976: Glycerol dehydrogenase (EC 1.1.1.6)
*
Clostridium butyricum 5521

Site:
position = -61
score = 4.49826
sequence = TTGTAAACGATATTAT

Gene: CBY_0508: Glycerol dehydrogenase (EC 1.1.1.6)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -31
score = 4.37695
sequence = TAGTAAATGATTTTAT

Gene: CPF_0094: Glycerol dehydrogenase (EC 1.1.1.6)
 
Clostridium tetani E88
Glycerol dehydrogenase (EC 1.1.1.6)
CAC1323
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1323: Sarcosine oxidase alpha subunit (EC 1.5.3.1)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4507: Sarcosine oxidase alpha subunit (EC 1.5.3.1)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Sarcosine oxidase alpha subunit (EC 1.5.3.1)
CAC1324
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1324: Uncharacterized predected metal-binding protein
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4506: Uncharacterized predected metal-binding protein
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Uncharacterized predected metal-binding protein
dak
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO0975: Dihydroxyacetone kinase, ATP-dependent (EC 2.7.1.29) / FAD-AMP lyase (cyclizing) (EC 4.6.1.15)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_0095: Dihydroxyacetone kinase, ATP-dependent (EC 2.7.1.29) / FAD-AMP lyase (cyclizing) (EC 4.6.1.15)
 
Clostridium tetani E88
Dihydroxyacetone kinase, ATP-dependent (EC 2.7.1.29) / FAD-AMP lyase (cyclizing) (EC 4.6.1.15)
 
CRON 68.
licT
*
Clostridium acetobutylicum ATCC 824

Site:
position = -154
score = 4.74021
sequence = ATGAAAATGTTATCAT

Gene: CAC0422: Beta-glucoside bgl operon antiterminator, BglG family
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Beta-glucoside bgl operon antiterminator, BglG family
 
CRON 69.
nifJ2
*
Clostridium acetobutylicum ATCC 824

Site:
position = -117
score = 4.54065
sequence = TTGAAAAAAATTTTAT

Gene: CAC2229: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
*2
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4318: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)

Site:
position = -223
score = 4.38711
sequence = TTTTAAAAGTTATAAT

Gene: Cbei_1853: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -191
score = 4.31724
sequence = TTTAAAATGATTTTTA

Gene: CBO2760: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
*3
Clostridium butyricum 5521

Site:
position = -166
score = 4.26617
sequence = TTGTAAACAATAAAAA

Gene: CBY_0233: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)

Site:
position = -228
score = 4.10709
sequence = TTTATAAAAATTTAAT

Gene: CBY_1889: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)

Site:
position = -186
score = 4.35086
sequence = AATTAAATGTTTAAAT

Gene: CBY_3642: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Clostridium kluyveri DSM 555

Gene: CKL_2138: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
*
Clostridium novyi NT

Site:
position = -193
score = 4.11937
sequence = TTGAAAAAGTGTACAA

Gene: NT01CX_1854: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Clostridium perfringens ATCC 13124

Gene: CPF_2318: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Clostridium tetani E88

Gene: CTC01741: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
CRON 70.
sspA
*
Clostridium acetobutylicum ATCC 824

Site:
position = -72
score = 4.16841
sequence = TAAAAAACGTTATTAT

Gene: CAC2372: Small acid-soluble spore protein beta
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_1798: Small acid-soluble spore protein beta
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO3145: Small acid-soluble spore protein beta
*
Clostridium butyricum 5521

Site:
position = -116
score = 4.56857
sequence = AAGAAAATGATTTTAT

Gene: CBY_0566: Small acid-soluble spore protein beta
 
Clostridium kluyveri DSM 555

Gene: CKL_3208: Small acid-soluble spore protein beta
 
Clostridium novyi NT

Gene: NT01CX_1748: Small acid-soluble spore protein beta
 
Clostridium perfringens ATCC 13124

Gene: CPF_2159: Small acid-soluble spore protein beta
 
Clostridium tetani E88
Small acid-soluble spore protein beta
CAC2371
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2371: Methyltransferase (EC 2.1.1.-)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_1799: Methyltransferase (EC 2.1.1.-)
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO3144: Methyltransferase (EC 2.1.1.-)
 
Clostridium butyricum 5521

Gene: CBY_0565: Methyltransferase (EC 2.1.1.-)
 
Clostridium kluyveri DSM 555

Gene: CKL_3209: Methyltransferase (EC 2.1.1.-)
 
Clostridium novyi NT

Gene: NT01CX_1749: Methyltransferase (EC 2.1.1.-)
 
Clostridium perfringens ATCC 13124

Gene: CPF_2158: Methyltransferase (EC 2.1.1.-)
*
Clostridium tetani E88

Site:
position = -51
score = 4.19393
sequence = AAGAAAAATATATAAT

Gene: CTC02292: Methyltransferase (EC 2.1.1.-)
Methyltransferase (EC 2.1.1.-)
hslO
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2370: Chaperonin
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_1800: Chaperonin
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO3143: Chaperonin
 
Clostridium butyricum 5521

Gene: CBY_0564: Chaperonin
 
Clostridium kluyveri DSM 555

Gene: CKL_3210: Chaperonin
 
Clostridium novyi NT

Gene: NT01CX_1750: Chaperonin
 
Clostridium perfringens ATCC 13124

Gene: CPF_2157: Chaperonin
 
Clostridium tetani E88

Gene: CTC02291: Chaperonin
Chaperonin
 
CRON 71.
CAC3669
*
Clostridium acetobutylicum ATCC 824

Site:
position = -69
score = 4.2872
sequence = ATGTATATGTTTTCAT

Gene: CAC3669: Transcriptional regulator, MarR family
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4981: Transcriptional regulator, MarR family
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO0645: Transcriptional regulator, MarR family
*
Clostridium butyricum 5521

Site:
position = -98
score = 4.0147
sequence = TTTAAAATGTAAAAAT

Gene: CBY_0511: Transcriptional regulator, MarR family
 
Clostridium kluyveri DSM 555

Gene: CKL_1651: Transcriptional regulator, MarR family
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Transcriptional regulator, MarR family
CAC3668
 
Clostridium acetobutylicum ATCC 824

Gene: CAC3668: Predicted transporter protein
 2
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4980: Predicted transporter protein

Gene: Cbei_5058: Predicted transporter protein
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO0646: Predicted transporter protein
 
Clostridium butyricum 5521

Gene: CBY_0510: Predicted transporter protein
 
Clostridium kluyveri DSM 555

Gene: CKL_1650: Predicted transporter protein
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted transporter protein
 
CRON 72.
sdaR
*
Clostridium acetobutylicum ATCC 824

Site:
position = -126
score = 4.55235
sequence = ATTAAAATGATTAAAA

Gene: CAC2833: Sugar diacid utilization regulator SdaR
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4476: Sugar diacid utilization regulator SdaR
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1135: Sugar diacid utilization regulator SdaR
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT

Gene: NT01CX_0982: Sugar diacid utilization regulator SdaR
*
Clostridium perfringens ATCC 13124

Site:
position = -131
score = 4.73295
sequence = TTGTAAATGTTTAAAT

Gene: CPF_0851: Sugar diacid utilization regulator SdaR
 
Clostridium tetani E88
Sugar diacid utilization regulator SdaR
 
CRON 73.
mepA
*
Clostridium acetobutylicum ATCC 824

Site:
position = -154
score = 4.60413
sequence = ATGAAAACATTAAAAT

Gene: CAC3295: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family
 
Clostridium beijerincki NCIMB 8052
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -139
score = 4.1368
sequence = TAGAAAAATTTATAAA

Gene: CBO2780: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family
 
Clostridium butyricum 5521

Gene: CBY_0420: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family
 
Clostridium kluyveri DSM 555
*
Clostridium novyi NT

Site:
position = -96
score = 4.24204
sequence = ATTAAATTGTTTTTAT

Gene: NT01CX_2313: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family
 
Clostridium perfringens ATCC 13124
*
Clostridium tetani E88

Site:
position = -136
score = 4.16396
sequence = ATGTAAATTTTAAATT

Gene: CTC01362: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family
 
CRON 74.
CPF_0244
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -223
score = 4.17159
sequence = TTAAAAATGTTAATAA

Site:
position = -129
score = 4.53066
sequence = TTGAAAACGTTTAGAT

Site:
position = -28
score = 4.47948
sequence = ATTAAAAAATTTTAAA

Gene: CPF_0244: Predicted hydrolase
 
Clostridium tetani E88
Predicted hydrolase
 
CRON 75.
murD
 
Clostridium acetobutylicum ATCC 824

Gene: CAC3194: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0107: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -73
score = 4.49419
sequence = TTTAAAATGTTTTATA

Gene: CBO3516: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)
 
Clostridium butyricum 5521

Gene: CBY_2184: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)
 
Clostridium kluyveri DSM 555

Gene: CKL_0181: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)
*
Clostridium novyi NT

Site:
position = -152
score = 4.58027
sequence = ATAAAAAAGTTTTTAT

Gene: NT01CX_1049: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)
 
Clostridium perfringens ATCC 13124

Gene: CPF_2774: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)
 
Clostridium tetani E88

Gene: CTC00213: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)
 
CRON 76.
hom
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
*
Clostridium tetani E88

Site:
position = -24
score = 4.7171
sequence = AAGAAAACGTTTTCTT

Gene: CTC00886: Homoserine dehydrogenase (EC 1.1.1.3)
Homoserine dehydrogenase (EC 1.1.1.3)
 
CRON 77.
nagE
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4532: PTS system, N-acetylglucosamine-specific IIABC component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1684: PTS system, N-acetylglucosamine-specific IIABC component (EC 2.7.1.69)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -151
score = 4.77759
sequence = AAGAAAACGTTTTAAA

Gene: CPF_1070: PTS system, N-acetylglucosamine-specific IIABC component (EC 2.7.1.69)
 
Clostridium tetani E88
PTS system, N-acetylglucosamine-specific IIABC component (EC 2.7.1.69)
 
CRON 78.
manA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0996: Mannose-6-phosphate isomerase (EC 5.3.1.8)
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -77
score = 4.04506
sequence = ATGTAAATGAATTTTA

Gene: CBY_1661: Mannose-6-phosphate isomerase (EC 5.3.1.8)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Mannose-6-phosphate isomerase (EC 5.3.1.8)
 
CRON 79.
pelX
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -164
score = 4.7797
sequence = ATGAAAACGATTATAA

Site:
position = -32
score = 4.12391
sequence = TTGTTAACGTTAACTA

Gene: CBY_2353: Pectate lyase (EC 4.2.2.9)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Pectate lyase (EC 4.2.2.9)
 
CRON 80.
malE
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0822: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE
 
Clostridium kluyveri DSM 555

Gene: CKL_3170: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -183
score = 4.76933
sequence = TTGAAAATGTTTTCTT

Site:
position = -128
score = 4.46875
sequence = TTTAAAAAGATTTTAA

Gene: CPF_2652: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE
 
Clostridium tetani E88
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE
malF
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0821: maltose transport system permease protein MalF
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_2651: maltose transport system permease protein MalF
 
Clostridium tetani E88
maltose transport system permease protein MalF
malG
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0820: Maltose/maltodextrin ABC transporter, permease protein MalG
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_2650: Maltose/maltodextrin ABC transporter, permease protein MalG
 
Clostridium tetani E88
Maltose/maltodextrin ABC transporter, permease protein MalG
 
CRON 81.
nagJ
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -128
score = 4.75685
sequence = TTGAAAACGATTTTAA

Site:
position = -91
score = 4.14334
sequence = ATAAAAATGTATTAAA

Gene: CPF_0875: O-N-acetylglucosaminidase (EC 3.2.1.169)
 
Clostridium tetani E88
O-N-acetylglucosaminidase (EC 3.2.1.169)
 
CRON 82.
fucO
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -119
score = 4.74961
sequence = TTGAAAACGATTTATA

Gene: Cbei_0455: Lactaldehyde reductase (EC 1.1.1.77)
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -66
score = 4.13443
sequence = TTGATAAAAATATAAT

Gene: CBY_1562: Lactaldehyde reductase (EC 1.1.1.77)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -148
score = 4.2727
sequence = ATTAAAAATATTTATT

Gene: CPF_1046: Lactaldehyde reductase (EC 1.1.1.77)
 
Clostridium tetani E88
Lactaldehyde reductase (EC 1.1.1.77)
 
CRON 83.
niaX
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -178
score = 4.15855
sequence = ATATAAAATTTTTAAA

Gene: Cbei_1404: Substrate-specific component NiaX of predicted niacin ECF transporter
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -207
score = 4.30323
sequence = ATTTAAATAATTTAAT

Gene: CBO2620: Substrate-specific component NiaX of predicted niacin ECF transporter
*
Clostridium butyricum 5521

Site:
position = -215
score = 4.75754
sequence = ATGTAAATGTTTTAAA

Gene: CBY_0041: Substrate-specific component NiaX of predicted niacin ECF transporter
 
Clostridium kluyveri DSM 555

Gene: CKL_1488: Substrate-specific component NiaX of predicted niacin ECF transporter
 
Clostridium novyi NT

Gene: NT01CX_1651: Substrate-specific component NiaX of predicted niacin ECF transporter
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC01003: Substrate-specific component NiaX of predicted niacin ECF transporter
Substrate-specific component NiaX of predicted niacin ECF transporter
 
CRON 84.
CBY_0862
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -104
score = 4.71774
sequence = ATGAAAATGATTACTT

Gene: CBY_0862: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Cbei_4640
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -214
score = 4.31857
sequence = TAGAAAAAAATTAAAA

Gene: Cbei_4640: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502
*3
Clostridium butyricum 5521

Site:
position = -104
score = 4.49225
sequence = AAGAAAACATTTACAA

Gene: CBY_2074: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)

Site:
position = -228
score = 4.37824
sequence = AATAAAAAGATTAAAA

Gene: CBY_0874: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)

Gene: CBY_0863: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
CBY_0864
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4639: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502
 3
Clostridium butyricum 5521

Gene: CBY_2073: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)

Gene: CBY_0875: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)

Gene: CBY_0864: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
CBY_0865
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0865: Putative sugar kinase
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Putative sugar kinase
bglA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_3984: 6-phospho-beta-glucosidase (EC 3.2.1.86)
 
Clostridium botulinum A str. ATCC 3502
 2
Clostridium butyricum 5521

Gene: CBY_0860: 6-phospho-beta-glucosidase (EC 3.2.1.86)

Gene: CBY_0866: 6-phospho-beta-glucosidase (EC 3.2.1.86)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
6-phospho-beta-glucosidase (EC 3.2.1.86)
 
CRON 85.
galU
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -147
score = 4.12227
sequence = TAATAAATGATTAAAT

Site:
position = -99
score = 4.73076
sequence = ATTAAAACGTTTAAAA

Gene: CBY_1554: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)
 
CRON 86.
licH
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -74
score = 4.73076
sequence = ATTAAAACGTTTAAAA

Gene: Cbei_4847: 6-phospho-beta-glucosidase (EC 3.2.1.86)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
6-phospho-beta-glucosidase (EC 3.2.1.86)
bglP
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4846: Beta-glucoside-specific phosphotransferase enzyme IIBCA component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Beta-glucoside-specific phosphotransferase enzyme IIBCA component (EC 2.7.1.69)
Cbei_4845
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4845: Predicted racemase
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted racemase
 
CRON 87.
pulA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -106
score = 4.70465
sequence = TTGAAAACGTTATTAT

Gene: CPF_1087: Pullulanase (EC 3.2.1.41)
 
Clostridium tetani E88
Pullulanase (EC 3.2.1.41)
 
CRON 88.
pagL
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -195
score = 4.71287
sequence = ATGAAAATATTTTCAT

Gene: Cbei_4984: Phospho-alpha-glucosidase (EC 3.2.1.122)
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -219
score = 4.28023
sequence = TAGAAAAAGATATTAA

Site:
position = -79
score = 4.48028
sequence = TTGATAATGATTAAAT

Gene: CBO0267: Phospho-alpha-glucosidase (EC 3.2.1.122)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Phospho-alpha-glucosidase (EC 3.2.1.122)
glcB
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4983: PTS system, maltose and glucose-specific IICBA component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO0268: PTS system, maltose and glucose-specific IICBA component (EC 2.7.1.69)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, maltose and glucose-specific IICBA component (EC 2.7.1.69)
ypqE
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4982: PTS system, glucose-specific IIA component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, glucose-specific IIA component (EC 2.7.1.69)
 
CRON 89.
glsA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO2808: Glutaminase (EC 3.5.1.2)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -99
score = 4.32956
sequence = TTTTAAAAGATTTATA

Site:
position = -75
score = 4.70319
sequence = TTGAAAATGTTATAAT

Gene: CPF_2251: Glutaminase (EC 3.5.1.2)
*
Clostridium tetani E88

Site:
position = -167
score = 4.17423
sequence = ATAAAAACAATATAAA

Site:
position = -148
score = 4.24192
sequence = AATAAAACGATAAAAA

Gene: CTC00566: Glutaminase (EC 3.5.1.2)
Glutaminase (EC 3.5.1.2)
 
CRON 90.
Cbei_4985
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -131
score = 4.71287
sequence = ATGAAAATATTTTCAT

Gene: Cbei_4985: Predicted transcriptional regulator of glucosides utilization, RpiR family
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted transcriptional regulator of glucosides utilization, RpiR family
 
CRON 91.
glvC
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -161
score = 4.70753
sequence = ATGTAAACATTTTAAT

Gene: CBO0277: PTS system, maltose-specific IIBC component (EC 2.7.1.69)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, maltose-specific IIBC component (EC 2.7.1.69)
 
CRON 92.
mglB
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4434: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -43
score = 4.68457
sequence = ATGTAAACGATTTTAA

Gene: CBY_1710: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
mglA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4433: Galactose/methyl galactoside ABC transport system, ATP-binding protein (TC 3.A.1.2.3)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1711: Galactose/methyl galactoside ABC transport system, ATP-binding protein (TC 3.A.1.2.3)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Galactose/methyl galactoside ABC transport system, ATP-binding protein (TC 3.A.1.2.3)
mglC
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4432: Galactose/methyl galactoside ABC transport system, permease protein (TC 3.A.1.2.3)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1712: Galactose/methyl galactoside ABC transport system, permease protein (TC 3.A.1.2.3)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Galactose/methyl galactoside ABC transport system, permease protein (TC 3.A.1.2.3)
 
CRON 93.
abrB
*
Clostridium acetobutylicum ATCC 824

Site:
position = -108
score = 4.66601
sequence = ATGAAAAAAATTAAAT

Gene: CAC3647: Transition state regulatory protein AbrB
*
Clostridium beijerincki NCIMB 8052

Site:
position = -95
score = 4.11479
sequence = TTATAAATATTTAAAA

Gene: Cbei_4885: Transition state regulatory protein AbrB
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO0063: Transition state regulatory protein AbrB
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555

Gene: CKL_3784: Transition state regulatory protein AbrB
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_0277: Transition state regulatory protein AbrB
 
Clostridium tetani E88
Transition state regulatory protein AbrB
 
CRON 94.
Cbei_2038
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -60
score = 4.66107
sequence = ATTAAAATGATTTAAT

Gene: Cbei_2038: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
 
CRON 95.
rny
*
Clostridium acetobutylicum ATCC 824

Site:
position = -183
score = 4.1235
sequence = TTGTAAACTCTTTAAT

Gene: CAC1816: Ribonuclease Y
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_1217: Ribonuclease Y
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -208
score = 4.14026
sequence = ATGAAAAAATATATAA

Gene: CBO2404: Ribonuclease Y
 
Clostridium butyricum 5521

Gene: CBY_0291: Ribonuclease Y
 
Clostridium kluyveri DSM 555

Gene: CKL_1446: Ribonuclease Y
*
Clostridium novyi NT

Site:
position = -223
score = 4.67476
sequence = ATTAAAAAGTTTTTAT

Gene: NT01CX_2122: Ribonuclease Y
 
Clostridium perfringens ATCC 13124

Gene: CPF_1926: Ribonuclease Y
*
Clostridium tetani E88

Site:
position = -69
score = 4.11903
sequence = ATAAAAAAATTAATAT

Gene: CTC01290: Ribonuclease Y
Ribonuclease Y
 
CRON 96.
malH
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -205
score = 4.06774
sequence = AAGAAAAGGTTAACAA

Gene: Cbei_0230: Maltose/maltodextrin ABC transporter, periplasmic component
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -226
score = 4.64232
sequence = TTGTAAAAGTTTACTT

Gene: CBY_2940: Maltose/maltodextrin ABC transporter, periplasmic component
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Maltose/maltodextrin ABC transporter, periplasmic component
malF
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0231: Maltose/maltodextrin ABC transporter, permease protein MalF
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_2941: Maltose/maltodextrin ABC transporter, permease protein MalF
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Maltose/maltodextrin ABC transporter, permease protein MalF
malG
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0232: Maltose/maltodextrin ABC transporter, permease protein MalG
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_2942: Maltose/maltodextrin ABC transporter, permease protein MalG
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Maltose/maltodextrin ABC transporter, permease protein MalG
malQ
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0233: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_2943: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
 
CRON 97.
livH
 
Clostridium acetobutylicum ATCC 824
 2
Clostridium beijerincki NCIMB 8052

Gene: Cbei_2768: High-affinity branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)

Gene: Cbei_5043: High-affinity branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0627: High-affinity branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
*
Clostridium kluyveri DSM 555

Site:
position = -55
score = 4.39623
sequence = ATGTAAAAATTTATTT

Gene: CKL_2743: High-affinity branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
High-affinity branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
livM
 
Clostridium acetobutylicum ATCC 824
 2
Clostridium beijerincki NCIMB 8052

Gene: Cbei_2767: Branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)

Gene: Cbei_5044: Branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0628: Branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
 
Clostridium kluyveri DSM 555

Gene: CKL_2742: Branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
livG
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_5045: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0629: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
 
Clostridium kluyveri DSM 555

Gene: CKL_2741: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
livF
 
Clostridium acetobutylicum ATCC 824
 3
Clostridium beijerincki NCIMB 8052

Gene: Cbei_5046: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)

Gene: Cbei_2765: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)

Gene: Cbei_2766: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0630: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
 
Clostridium kluyveri DSM 555

Gene: CKL_2740: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
livK
 
Clostridium acetobutylicum ATCC 824
*2
Clostridium beijerincki NCIMB 8052

Site:
position = -225
score = 4.09009
sequence = ATTTTAACGTTAAAAA

Site:
position = -168
score = 4.08664
sequence = AAGTAAATATTATTAT

Gene: Cbei_2769: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)

Site:
position = -188
score = 4.65267
sequence = ATGATAACGTTTTTAT

Site:
position = -153
score = 4.11919
sequence = ATATAAAATATTAAAT

Gene: Cbei_5042: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0626: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)
 
Clostridium kluyveri DSM 555

Gene: CKL_2739: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)
 
CRON 98.
CAC2534
*
Clostridium acetobutylicum ATCC 824

Site:
position = -190
score = 4.0593
sequence = AAGAAAACGTTGTCTT

Site:
position = -82
score = 4.64316
sequence = TTGAAAAAAATTTAAT

Gene: CAC2534: Putative metal-dependent phosphohydrolase
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_3051: Putative metal-dependent phosphohydrolase
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Putative metal-dependent phosphohydrolase
 
CRON 99.
araF
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -186
score = 4.63959
sequence = ATGAAAACGTATTAAT

Gene: Cbei_4450: L-arabinose ABC transporter, substrate-binding periplasmic protein (TC 3.A.1.2.2)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
L-arabinose ABC transporter, substrate-binding periplasmic protein (TC 3.A.1.2.2)
araG
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4449: L-arabinose ABC transporter, ATP-binding protein
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
L-arabinose ABC transporter, ATP-binding protein
araH
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4448: L-arabinose ABC transporter, permease protein (TC 3.A.1.2.2)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
L-arabinose ABC transporter, permease protein (TC 3.A.1.2.2)
 
CRON 100.
CPF_1716
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -114
score = 4.62849
sequence = AAGAAAACGATTAATT

Site:
position = -63
score = 4.1582
sequence = TAGTAATCGTTTAAAA

Site:
position = -48
score = 4.2315
sequence = AAGAAAAAATTAACAA

Gene: CPF_1716: PTS system, predicted N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
 
Clostridium tetani E88
PTS system, predicted N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
CPF_1715
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1715: PTS system, predicted N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
 
Clostridium tetani E88
PTS system, predicted N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
CPF_1714
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1714: PTS system, predicted N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
 
Clostridium tetani E88
PTS system, predicted N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
 
CRON 101.
cheY
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0585: Chemotaxis protein cheY
*
Clostridium beijerincki NCIMB 8052

Site:
position = -132
score = 4.07154
sequence = ATGATAAATTTATTAT

Gene: Cbei_4959: Chemotaxis protein cheY
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO1786: Chemotaxis protein cheY
*
Clostridium butyricum 5521

Site:
position = -220
score = 4.63269
sequence = AAGTAAAAGTTTTCAT

Site:
position = -195
score = 4.57333
sequence = TTGAAAATATTTTTAT

Site:
position = -84
score = 4.16923
sequence = ATGATAATAATTTATA

Gene: CBY_1888: Chemotaxis protein cheY
 
Clostridium kluyveri DSM 555

Gene: CKL_2207: Chemotaxis protein cheY
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Chemotaxis protein cheY
cheX
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0586: Chemotaxis protein CheX
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4958: Chemotaxis protein CheX
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO1787: Chemotaxis protein CheX
 
Clostridium butyricum 5521

Gene: CBY_1887: Chemotaxis protein CheX
 
Clostridium kluyveri DSM 555

Gene: CKL_2206: Chemotaxis protein CheX
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Chemotaxis protein CheX
 
CRON 102.
CPF_1064
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -148
score = 4.63046
sequence = ATGAAAATGTTATCTT

Site:
position = -76
score = 4.0963
sequence = TTTAAAAAAATTATTA

Gene: CPF_1064: Predicted transporter with diguanylate phosphodiesterase EAL domain
 
Clostridium tetani E88
Predicted transporter with diguanylate phosphodiesterase EAL domain
 
CRON 103.
CAC1333
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1333: Transcriptional regulator, AraC family
*
Clostridium beijerincki NCIMB 8052

Site:
position = -74
score = 4.63324
sequence = TTTAAAACGTTTAATT

Gene: Cbei_4661: Transcriptional regulator, AraC family
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Transcriptional regulator, AraC family
 
CRON 104.
pflD
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -101
score = 4.62467
sequence = TTGTAAACGTTTATTT

Gene: CBY_1978: pyruvate formate-lyase
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT

Gene: NT01CX_0385: pyruvate formate-lyase
 
Clostridium perfringens ATCC 13124
*
Clostridium tetani E88

Site:
position = -40
score = 4.12221
sequence = TTAAAAAGGATTAAAT

Gene: CTC00936: pyruvate formate-lyase
pyruvate formate-lyase
pflC
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1977: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT

Gene: NT01CX_0384: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC00937: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
 
CRON 105.
yrvJ
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
*
Clostridium kluyveri DSM 555

Site:
position = -174
score = 4.62311
sequence = TTAAAAAAGTTTTAAT

Gene: CKL_0782: N-acetylmuramoyl-L-alanine amidase
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
N-acetylmuramoyl-L-alanine amidase
 
CRON 106.
thlA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT

Gene: NT01CX_0603: Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
Clostridium perfringens ATCC 13124
*
Clostridium tetani E88

Site:
position = -113
score = 4.62311
sequence = TTGAAAAATTTTTAAT

Gene: CTC00312: Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Acetyl-CoA acetyltransferase (EC 2.3.1.9)
 
CRON 107.
CBY_3470
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_3470: Predicted N-acetylglucosamine ABC transporter, substrate-binding protein
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -48
score = 4.61416
sequence = AAGAAAATGTTTACAA

Gene: CPF_0556: Predicted N-acetylglucosamine ABC transporter, substrate-binding protein
 
Clostridium tetani E88
Predicted N-acetylglucosamine ABC transporter, substrate-binding protein
CBY_3467
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_3467: Predicted N-acetylglucosamine ABC transporter, permease protein
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_0557: Predicted N-acetylglucosamine ABC transporter, permease protein
 
Clostridium tetani E88
Predicted N-acetylglucosamine ABC transporter, permease protein
CBY_3468
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_3468: Predicted N-acetylglucosamine ABC transporter, permease protein
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_0558: Predicted N-acetylglucosamine ABC transporter, permease protein
 
Clostridium tetani E88
Predicted N-acetylglucosamine ABC transporter, permease protein
 
CRON 108.
Cbei_3501
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -33
score = 4.62551
sequence = TTGAAAACGTTATATA

Gene: Cbei_3501: Predicted carbohydrate ABC transporter, periplasmic substrate-binding protein
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted carbohydrate ABC transporter, periplasmic substrate-binding protein
Cbei_3500
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_3500: Predicted carbohydrate , permease protein
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted carbohydrate , permease protein
Cbei_3499
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_3499: Predicted carbohydrate ABC transporter, permease protein
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted carbohydrate ABC transporter, permease protein
Cbei_3498
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_3498: Hypothetical protein
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Hypothetical protein
 
CRON 109.
Cbei_4156
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -156
score = 4.13702
sequence = ATAATAACATTTTAAA

Gene: Cbei_4156: Zinc protease (EC 3.4.-.-)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Zinc protease (EC 3.4.-.-)
ltaE
 
Clostridium acetobutylicum ATCC 824

Gene: CAC3420: Low-specificity L-threonine aldolase (EC 4.1.2.5)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4155: Low-specificity L-threonine aldolase (EC 4.1.2.5)
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -52
score = 4.18891
sequence = ATGCAAACTTTTTTAT

Gene: CBO2233: Low-specificity L-threonine aldolase (EC 4.1.2.5)
*
Clostridium butyricum 5521

Site:
position = -222
score = 4.61416
sequence = AAGAAAATGTTTACAA

Gene: CBY_3247: Low-specificity L-threonine aldolase (EC 4.1.2.5)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Low-specificity L-threonine aldolase (EC 4.1.2.5)
 
CRON 110.
treB
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -215
score = 4.11156
sequence = TATTAAACATTTTCAA

Site:
position = -134
score = 4.61104
sequence = TTGTAAACATTTAAAT

Gene: Cbei_2320: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO1987: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -214
score = 4.18855
sequence = ATTTTAAAGTTTAATT

Gene: CPF_0541: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)
 
Clostridium tetani E88
PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)
treA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_2321: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO1988: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
 
Clostridium butyricum 5521

Gene: CBY_3145: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_0542: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
 
Clostridium tetani E88
Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
 
CRON 111.
Cbei_4325
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -203
score = 4.61509
sequence = TTGAAAAAATTTTTAT

Gene: Cbei_4325: Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-)
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -32
score = 4.06531
sequence = TATTAAATATTTAAAT

Gene: CBO1816: Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-)
*
Clostridium butyricum 5521

Site:
position = -232
score = 4.06892
sequence = TTTTAAATATTTATTT

Site:
position = -64
score = 4.09019
sequence = ATGAAAACAAATATTT

Gene: CBY_3649: Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-)
 
Clostridium kluyveri DSM 555

Gene: CKL_1561: Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_2328: Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-)
 
Clostridium tetani E88

Gene: CTC01321: Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-)
Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-)
 
CRON 112.
lacR
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -62
score = 4.61097
sequence = ATGTAAATGTTTAATA

Gene: CPF_0765: Transcription regulator of lactose utilization, AraC family
 
Clostridium tetani E88
Transcription regulator of lactose utilization, AraC family
 
CRON 113.
agaN
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -58
score = 4.61084
sequence = TTGAAAACAATTTCAA

Gene: CBY_1729: Alpha-galactosidase (EC 3.2.1.22)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_0491: Alpha-galactosidase (EC 3.2.1.22)
 
Clostridium tetani E88
Alpha-galactosidase (EC 3.2.1.22)
 
CRON 114.
Cbei_2953
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_2953: Methyl-accepting chemotaxis protein
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_4130: Methyl-accepting chemotaxis protein
 
Clostridium kluyveri DSM 555
*
Clostridium novyi NT

Site:
position = -194
score = 4.36273
sequence = ATATAAATGATTTAAA

Site:
position = -74
score = 4.59085
sequence = ATGAAAAAGATAATAT

Gene: NT01CX_0485: Methyl-accepting chemotaxis protein
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Methyl-accepting chemotaxis protein
 
CRON 115.
ispF
*
Clostridium acetobutylicum ATCC 824

Site:
position = -77
score = 4.25261
sequence = TTTAAAACTATTTCTT

Gene: CAC0434: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0297: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO0066: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)
*
Clostridium butyricum 5521

Site:
position = -90
score = 4.25288
sequence = ATGTAAATGTTTACCT

Gene: CBY_3009: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)
 
Clostridium kluyveri DSM 555

Gene: CKL_3774: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)
 
Clostridium novyi NT

Gene: NT01CX_0736: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)
*
Clostridium perfringens ATCC 13124

Site:
position = -202
score = 4.09112
sequence = ATATAAAATTTTATAT

Gene: CPF_2616: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)
 
Clostridium tetani E88

Gene: CTC00232: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)
 
CRON 116.
Cbei_0663
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -234
score = 4.1629
sequence = ATTAAATTGTTTTATA

Site:
position = -190
score = 4.24891
sequence = ATGAAAATGAATTTTT

Site:
position = -100
score = 4.0925
sequence = TAGAAAATTATATAAT

Gene: Cbei_0663: Hypothetical membrane protein
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -153
score = 4.59411
sequence = ATGAAAAAAATTAAAA

Gene: CBY_2696: Hypothetical membrane protein
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1372: Hypothetical membrane protein
 
Clostridium tetani E88
Hypothetical membrane protein
 
CRON 117.
Cbei_3986
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -59
score = 4.57631
sequence = AAGAAAATGTTTACTT

Gene: Cbei_3986: Putative S-layer protein (peptidoglycan anchored)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT

Gene: NT01CX_0211: Putative S-layer protein (peptidoglycan anchored)
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Putative S-layer protein (peptidoglycan anchored)
 
CRON 118.
CAC0960
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0960: Putative peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -93
score = 4.58614
sequence = ATGAAAAAGTTAAATA

Gene: CBY_2799: Putative peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-)
 
Clostridium kluyveri DSM 555

Gene: CKL_1720: Putative peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC00537: Putative peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-)
Putative peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-)
 
CRON 119.
bglA
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1405: 6-phospho-beta-glucosidase (EC 3.2.1.86)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4669: 6-phospho-beta-glucosidase (EC 3.2.1.86)
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -153
score = 4.59627
sequence = ATGTAAACAATTAAAT

Gene: CBY_0846: 6-phospho-beta-glucosidase (EC 3.2.1.86)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
6-phospho-beta-glucosidase (EC 3.2.1.86)
 
CRON 120.
xylB
 
Clostridium acetobutylicum ATCC 824

Gene: CAC1344: Ribulokinase (EC 2.7.1.16)
*
Clostridium beijerincki NCIMB 8052

Site:
position = -41
score = 4.5712
sequence = AAGTAAACGATTTAAA

Gene: Cbei_4452: Ribulokinase (EC 2.7.1.16)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Ribulokinase (EC 2.7.1.16)
 
CRON 121.
CBO2572
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -49
score = 4.56458
sequence = TTGAAAATAATTAAAT

Gene: CBO2572: Malate permease
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Malate permease
 
CRON 122.
ytxC
 
Clostridium acetobutylicum ATCC 824

Gene: CAC2363: Putative sporulation protein YtxC
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_1568: Putative sporulation protein YtxC
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -108
score = 4.54862
sequence = TTGAAAAAAATTTCAA

Gene: CBO3139: Putative sporulation protein YtxC
*
Clostridium butyricum 5521

Site:
position = -241
score = 4.15161
sequence = TTATAAATATTTTAAA

Site:
position = -95
score = 4.22154
sequence = ATAAAAAAATTAAAAT

Gene: CBY_0558: Putative sporulation protein YtxC
*
Clostridium kluyveri DSM 555

Site:
position = -195
score = 4.10494
sequence = ATTATAATTTTTTAAT

Gene: CKL_3197: Putative sporulation protein YtxC
 
Clostridium novyi NT

Gene: NT01CX_1759: Putative sporulation protein YtxC
 
Clostridium perfringens ATCC 13124

Gene: CPF_2147: Putative sporulation protein YtxC
 
Clostridium tetani E88

Gene: CTC02287: Putative sporulation protein YtxC
Putative sporulation protein YtxC
 
CRON 123.
CBO2472
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -33
score = 4.55142
sequence = ATGAAAAATTTTACAA

Gene: CBO2472: Glutamate/gamma-aminobutyrate antiporter
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Glutamate/gamma-aminobutyrate antiporter
 
CRON 124.
CPF_1753
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -50
score = 4.53651
sequence = TTGAAAATATTTATAT

Gene: CPF_1753: Putative N-acetylmuramoyl-L-alanine amidase
 
Clostridium tetani E88

Gene: CTC01537: Putative N-acetylmuramoyl-L-alanine amidase
Putative N-acetylmuramoyl-L-alanine amidase
 
CRON 125.
ifcA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
*
Clostridium tetani E88

Site:
position = -39
score = 4.54191
sequence = ATGAAAAAATTAAAAT

Gene: CTC01488: Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
 
CRON 126.
leuA1
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -192
score = 4.52976
sequence = ATAAAAATGATTAAAT

Gene: Cbei_2175: 2-isopropylmalate synthase (EC 2.3.3.13)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555

Gene: CKL_0047: 2-isopropylmalate synthase (EC 2.3.3.13)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
2-isopropylmalate synthase (EC 2.3.3.13)
 
CRON 127.
ygeW
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_1968: Putative ornithine carbamoyltransferase (EC 2.1.3.3)
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -208
score = 4.31596
sequence = ATTAAAATGATAAATT

Gene: CBO2885: Putative ornithine carbamoyltransferase (EC 2.1.3.3)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Putative ornithine carbamoyltransferase (EC 2.1.3.3)
ygfK
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO2884: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
CBO2883
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO2883: Putative deaminase
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Putative deaminase
ygeY
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -245
score = 4.54448
sequence = TTGAAAATATTTACAA

Site:
position = -184
score = 4.15014
sequence = ATAAAAAATTTTTTTT

Gene: Cbei_1967: Putative deacetylase
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO2882: Putative deacetylase
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT

Gene: NT01CX_1618: Putative deacetylase
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Putative deacetylase
yqeA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_1969: Carbamate kinase (EC 2.7.2.2)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Carbamate kinase (EC 2.7.2.2)
 
CRON 128.
yjiM
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
*2
Clostridium botulinum A str. ATCC 3502

Site:
position = -85
score = 4.53776
sequence = ATGAAATAGATTTAAT

Gene: CBO3245: 2-hydroxyglutaryl-CoA dehydratase, beta subunit family protein

Gene: CBO3244: 2-hydroxyglutaryl-CoA dehydratase, beta subunit family protein
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
2-hydroxyglutaryl-CoA dehydratase, beta subunit family protein
 
CRON 129.
galM
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -55
score = 4.16255
sequence = ATGTAAATGTATACTA

Gene: Cbei_4465: Aldose 1-epimerase (EC 5.1.3.3)
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -118
score = 4.13892
sequence = TTAAAAAGGTTTTCAA

Site:
position = -32
score = 4.5392
sequence = ATGAAAACTATTACAA

Gene: CBY_4133: Aldose 1-epimerase (EC 5.1.3.3)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Aldose 1-epimerase (EC 5.1.3.3)
cbgA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_1236: Beta-galactosidase (EC 3.2.1.23)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_4134: Beta-galactosidase (EC 3.2.1.23)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Beta-galactosidase (EC 3.2.1.23)
 
CRON 130.
Cbei_2423
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -27
score = 4.53697
sequence = ATGAAAATATTATAAT

Gene: Cbei_2423: Predicted ABC transporter, periplasmic protein
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted ABC transporter, periplasmic protein
 
CRON 131.
bglC
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4643: Aryl-phospho-beta-D-glucosidase (EC3.2.1.86)
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -34
score = 4.52807
sequence = ATGAAATCGATTTAAA

Gene: CBY_0850: Aryl-phospho-beta-D-glucosidase (EC3.2.1.86)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Aryl-phospho-beta-D-glucosidase (EC3.2.1.86)
 
CRON 132.
pykA
*
Clostridium acetobutylicum ATCC 824

Site:
position = -168
score = 4.24567
sequence = ATTAAAAATTTTATAA

Gene: CAC2660: Pyruvate carboxyl transferase (EC 6.4.1.1)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4960: Pyruvate carboxyl transferase (EC 6.4.1.1)
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -189
score = 4.19671
sequence = TAGTAAATTTTTAAAT

Site:
position = -104
score = 4.53594
sequence = TTGAAAAAATTTTATA

Gene: CBO3312: Pyruvate carboxyl transferase (EC 6.4.1.1)
 
Clostridium butyricum 5521

Gene: CBY_0816: Pyruvate carboxyl transferase (EC 6.4.1.1)
*
Clostridium kluyveri DSM 555

Site:
position = -127
score = 4.1471
sequence = ATAAAAAAAATAAAAT

Site:
position = -107
score = 4.32664
sequence = TTGAAATAATTTTAAT

Gene: CKL_0447: Pyruvate carboxyl transferase (EC 6.4.1.1)
 
Clostridium novyi NT

Gene: NT01CX_0659: Pyruvate carboxyl transferase (EC 6.4.1.1)
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC02224: Pyruvate carboxyl transferase (EC 6.4.1.1)
Pyruvate carboxyl transferase (EC 6.4.1.1)
 
CRON 133.
arcD
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -219
score = 4.12158
sequence = AAAAAAACATTTTATA

Site:
position = -145
score = 4.05306
sequence = TTAAAAATGTATTTAT

Site:
position = -67
score = 4.53126
sequence = ATGAAAATTTTTTATT

Gene: CBO0529: Putative arginine/ornithine antiporter
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Putative arginine/ornithine antiporter
 
CRON 134.
cggR
*
Clostridium acetobutylicum ATCC 824

Site:
position = -117
score = 4.46898
sequence = ATGAAAAAATTATATT

Gene: CAC0708: Central glycolytic genes regulator
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0596: Central glycolytic genes regulator
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -125
score = 4.51439
sequence = TTGAAAAATTTTAAAA

Gene: CBO0225: Central glycolytic genes regulator
*
Clostridium butyricum 5521

Site:
position = -122
score = 4.13485
sequence = TTTTAAATAATTAAAA

Gene: CBY_4067: Central glycolytic genes regulator
 
Clostridium kluyveri DSM 555
*
Clostridium novyi NT

Site:
position = -111
score = 4.09098
sequence = TTGATAACTTTTTTTA

Gene: NT01CX_1403: Central glycolytic genes regulator
*
Clostridium perfringens ATCC 13124

Site:
position = -112
score = 4.3571
sequence = AAGAAAAAATTTTCTA

Gene: CPF_1512: Central glycolytic genes regulator
 
Clostridium tetani E88

Gene: CTC00377: Central glycolytic genes regulator
Central glycolytic genes regulator
gapC
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0709: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0597: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO0226: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Clostridium butyricum 5521

Gene: CBY_4068: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Clostridium kluyveri DSM 555

Gene: CKL_3382: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Clostridium novyi NT

Gene: NT01CX_1404: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Clostridium perfringens ATCC 13124

Gene: CPF_1511: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Clostridium tetani E88

Gene: CTC00378: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
pgk
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0710: Phosphoglycerate kinase (EC 2.7.2.3)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_0598: Phosphoglycerate kinase (EC 2.7.2.3)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_4069: Phosphoglycerate kinase (EC 2.7.2.3)
 
Clostridium kluyveri DSM 555

Gene: CKL_3381: Phosphoglycerate kinase (EC 2.7.2.3)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_1510: Phosphoglycerate kinase (EC 2.7.2.3)
 
Clostridium tetani E88

Gene: CTC00379: Phosphoglycerate kinase (EC 2.7.2.3)
Phosphoglycerate kinase (EC 2.7.2.3)
tpi
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0711: Triosephosphate isomerase (EC 5.3.1.1)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555

Gene: CKL_3380: Triosephosphate isomerase (EC 5.3.1.1)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC00380: Triosephosphate isomerase (EC 5.3.1.1)
Triosephosphate isomerase (EC 5.3.1.1)
pgm
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0712: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555

Gene: CKL_3379: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC00381: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
eno
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0713: Enolase (EC 4.2.1.11)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555

Gene: CKL_3378: Enolase (EC 4.2.1.11)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88

Gene: CTC00382: Enolase (EC 4.2.1.11)
Enolase (EC 4.2.1.11)
 
CRON 135.
Cbei_3872
 
Clostridium acetobutylicum ATCC 824
*2
Clostridium beijerincki NCIMB 8052

Site:
position = -48
score = 4.5206
sequence = TTAAAAAAGTTTTTAT

Gene: Cbei_4912: PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69)

Site:
position = -48
score = 4.32211
sequence = ATAAAAACTTTTTTAT

Gene: Cbei_3872: PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69)
Cbei_3871
 
Clostridium acetobutylicum ATCC 824
 2
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4911: PTS system, mannose-specific IID component (EC 2.7.1.69)

Gene: Cbei_3871: PTS system, mannose-specific IID component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, mannose-specific IID component (EC 2.7.1.69)
 
CRON 136.
Cbei_2187
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_2187: PTS system, cellobiose-specific IIB component
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -77
score = 4.51188
sequence = ATGATAATGTTTATAT

Gene: CBY_1741: PTS system, cellobiose-specific IIB component
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, cellobiose-specific IIB component
 
CRON 137.
CAC0535
*
Clostridium acetobutylicum ATCC 824

Site:
position = -156
score = 4.38499
sequence = ATAAAAAAATTTTAAA

Gene: CAC0535: Metal-dependent hydrolase of the beta-lactamase superfamily II
 
Clostridium beijerincki NCIMB 8052
*3
Clostridium botulinum A str. ATCC 3502

Site:
position = -83
score = 4.07455
sequence = ATTTAAAAAATATAAA

Gene: CBO0522: Metal-dependent hydrolase of the beta-lactamase superfamily II

Gene: CBO1062: Metal-dependent hydrolase of the beta-lactamase superfamily II

Site:
position = -133
score = 4.14701
sequence = TAGAAAATTTTTAATA

Gene: CBO2288: Metal-dependent hydrolase of the beta-lactamase superfamily II
 
Clostridium butyricum 5521

Gene: CBY_0562: Metal-dependent hydrolase of the beta-lactamase superfamily II
*2
Clostridium kluyveri DSM 555

Gene: CKL_3641: Metal-dependent hydrolase of the beta-lactamase superfamily II

Site:
position = -133
score = 4.51439
sequence = TTAAAAAAGTTTAAAA

Gene: CKL_2838: Metal-dependent hydrolase of the beta-lactamase superfamily II
 
Clostridium novyi NT

Gene: NT01CX_2088: Metal-dependent hydrolase of the beta-lactamase superfamily II
 
Clostridium perfringens ATCC 13124

Gene: CPF_1168: Metal-dependent hydrolase of the beta-lactamase superfamily II
*
Clostridium tetani E88

Site:
position = -155
score = 4.13592
sequence = TTTAAAACTATTATTT

Gene: CTC02162: Metal-dependent hydrolase of the beta-lactamase superfamily II
Metal-dependent hydrolase of the beta-lactamase superfamily II
 
CRON 138.
CBO0270
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
*2
Clostridium botulinum A str. ATCC 3502

Site:
position = -232
score = 4.14058
sequence = ATTAAAAAATTATTTT

Site:
position = -174
score = 4.50383
sequence = TTGAAAAAAATTATAT

Gene: CBO0270: Transcription regulator, RpiR family

Gene: CBO0269: Transcription regulator, RpiR family
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Transcription regulator, RpiR family
 
CRON 139.
Cbei_5019
 
Clostridium acetobutylicum ATCC 824
*2
Clostridium beijerincki NCIMB 8052

Site:
position = -60
score = 4.50026
sequence = ATGAAAACGTATATAT

Gene: Cbei_5019: PTS system, predicted maltose a-specific IICB component (EC 2.7.1.69)

Site:
position = -35
score = 4.11535
sequence = AAGAAAATTATAAAAT

Gene: Cbei_4806: PTS system, predicted maltose a-specific IICB component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO0288: PTS system, predicted maltose a-specific IICB component (EC 2.7.1.69)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, predicted maltose a-specific IICB component (EC 2.7.1.69)
glvA2
 
Clostridium acetobutylicum ATCC 824
 2
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4805: Maltose-6'-phosphate glucosidase (EC 3.2.1.122)

Gene: Cbei_5018: Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO0289: Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
Cbei_4804
 
Clostridium acetobutylicum ATCC 824
 2
Clostridium beijerincki NCIMB 8052

Gene: Cbei_5017: PTS system, predicted maltose-specific IIA component (EC 2.7.1.69)

Gene: Cbei_4804: PTS system, predicted maltose-specific IIA component (EC 2.7.1.69)
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO0290: PTS system, predicted maltose-specific IIA component (EC 2.7.1.69)
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
PTS system, predicted maltose-specific IIA component (EC 2.7.1.69)
 
CRON 140.
CKL_0783
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
*
Clostridium kluyveri DSM 555

Site:
position = -205
score = 4.19337
sequence = TTATAAAAATTTTAAA

Site:
position = -177
score = 4.24277
sequence = ATGAAAAAATATAAAA

Site:
position = -142
score = 4.16694
sequence = TAAAAAATGTTATAAT

Gene: CKL_0783: Hypothetical protein
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Hypothetical protein
aroF
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0892: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
*
Clostridium beijerincki NCIMB 8052

Site:
position = -223
score = 4.14204
sequence = ATGCAAAAATTTTATA

Gene: Cbei_4577: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
*
Clostridium botulinum A str. ATCC 3502

Site:
position = -101
score = 4.5366
sequence = ATTTAAAAGTTTAAAA

Gene: CBO1472: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
*
Clostridium butyricum 5521

Site:
position = -92
score = 4.1106
sequence = CTTTAAAAGTTTAAAT

Gene: CBY_1585: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
 
Clostridium kluyveri DSM 555

Gene: CKL_0784: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_0687: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
 
Clostridium tetani E88

Gene: CTC01618: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
tyrA
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0893: Prephenate and/or arogenate dehydrogenase (unknown specificity) (EC 1.3.1.12)(EC 1.3.1.43)
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555

Gene: CKL_0785: Prephenate and/or arogenate dehydrogenase (unknown specificity) (EC 1.3.1.12)(EC 1.3.1.43)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Prephenate and/or arogenate dehydrogenase (unknown specificity) (EC 1.3.1.12)(EC 1.3.1.43)
aroB
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0894: 3-dehydroquinate synthase (EC 4.2.3.4)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4576: 3-dehydroquinate synthase (EC 4.2.3.4)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1586: 3-dehydroquinate synthase (EC 4.2.3.4)
 
Clostridium kluyveri DSM 555

Gene: CKL_0786: 3-dehydroquinate synthase (EC 4.2.3.4)
 
Clostridium novyi NT

Gene: NT01CX_0625: 3-dehydroquinate synthase (EC 4.2.3.4)
 
Clostridium perfringens ATCC 13124

Gene: CPF_0688: 3-dehydroquinate synthase (EC 4.2.3.4)
 
Clostridium tetani E88

Gene: CTC01620: 3-dehydroquinate synthase (EC 4.2.3.4)
3-dehydroquinate synthase (EC 4.2.3.4)
aroA
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0895: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4575: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
 
Clostridium botulinum A str. ATCC 3502

Gene: CBO1473: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
 
Clostridium butyricum 5521

Gene: CBY_1587: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
 
Clostridium kluyveri DSM 555

Gene: CKL_0787: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
 
Clostridium novyi NT

Gene: NT01CX_0624: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
 
Clostridium perfringens ATCC 13124

Gene: CPF_0689: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
 
Clostridium tetani E88

Gene: CTC01617: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
aroC
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0896: Chorismate synthase (EC 4.2.3.5)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4574: Chorismate synthase (EC 4.2.3.5)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1588: Chorismate synthase (EC 4.2.3.5)
 
Clostridium kluyveri DSM 555

Gene: CKL_0788: Chorismate synthase (EC 4.2.3.5)
 
Clostridium novyi NT

Gene: NT01CX_0623: Chorismate synthase (EC 4.2.3.5)
 
Clostridium perfringens ATCC 13124

Gene: CPF_0690: Chorismate synthase (EC 4.2.3.5)
 
Clostridium tetani E88
Chorismate synthase (EC 4.2.3.5)
pheA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4573: Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) # AroHI/PheAIp/ACT domain
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1589: Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) # AroHI/PheAIp/ACT domain
 
Clostridium kluyveri DSM 555

Gene: CKL_0789: Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) # AroHI/PheAIp/ACT domain
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) # AroHI/PheAIp/ACT domain
aroE
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0897: Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4572: Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1590: Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
 
Clostridium kluyveri DSM 555

Gene: CKL_0790: Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
 
Clostridium novyi NT

Gene: NT01CX_0621: Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
aroK
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0898: Shikimate kinase I (EC 2.7.1.71)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4571: Shikimate kinase I (EC 2.7.1.71)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_1591: Shikimate kinase I (EC 2.7.1.71)
 
Clostridium kluyveri DSM 555

Gene: CKL_0791: Shikimate kinase I (EC 2.7.1.71)
 
Clostridium novyi NT

Gene: NT01CX_0620: Shikimate kinase I (EC 2.7.1.71)
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Shikimate kinase I (EC 2.7.1.71)
CPF_0686
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
*
Clostridium perfringens ATCC 13124

Site:
position = -47
score = 4.07616
sequence = TTAAAAAAGTTTAGAA

Gene: CPF_0686: Hypothetical protein
 
Clostridium tetani E88
Hypothetical protein
 
CRON 141.
nanE
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -162
score = 4.11921
sequence = AAGAAAAAAATAACTT

Site:
position = -66
score = 4.5813
sequence = TTGAAAATATTTTCAA

Gene: CBY_0842: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_0177: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
 
Clostridium tetani E88
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
nanA
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0841: N-acetylneuraminate lyase (EC 4.1.3.3)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_0178: N-acetylneuraminate lyase (EC 4.1.3.3)
 
Clostridium tetani E88
N-acetylneuraminate lyase (EC 4.1.3.3)
CBY_0840
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0840: Predicted sialic acid transporter
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_0179: Predicted sialic acid transporter
 
Clostridium tetani E88
Predicted sialic acid transporter
CBY_0839
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0839: Conserved hypothetical protein
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_0180: Conserved hypothetical protein
 
Clostridium tetani E88
Conserved hypothetical protein
nanK
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0838: N-acetylmannosamine kinase (EC 2.7.1.60)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_0181: N-acetylmannosamine kinase (EC 2.7.1.60)
 
Clostridium tetani E88
N-acetylmannosamine kinase (EC 2.7.1.60)
siaR
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0837: Transcription regulator of sialic acid utilization, RpiR family
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124

Gene: CPF_0182: Transcription regulator of sialic acid utilization, RpiR family
 
Clostridium tetani E88
Transcription regulator of sialic acid utilization, RpiR family
 
CRON 142.
atoE
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -194
score = 4.58521
sequence = TTGAAAAAATTTTCTT

Gene: Cbei_3821: Short chain fatty acids transporter
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Short chain fatty acids transporter
hbd2
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_3820: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555

Gene: CKL_2795: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
ydiF
 
Clostridium acetobutylicum ATCC 824
*3
Clostridium beijerincki NCIMB 8052

Site:
position = -112
score = 4.07941
sequence = TTTAAAAAAATAATAT

Gene: Cbei_2040: Coenzyme A transferase

Gene: Cbei_3819: Coenzyme A transferase

Site:
position = -226
score = 4.66023
sequence = ATGTAAATGTTTACTT

Gene: Cbei_3351: Coenzyme A transferase
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Coenzyme A transferase
yxjC
 
Clostridium acetobutylicum ATCC 824
 2
Clostridium beijerincki NCIMB 8052

Gene: Cbei_3350: Predicted D-beta-hydroxybutyrate permease

Gene: Cbei_2041: Predicted D-beta-hydroxybutyrate permease
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted D-beta-hydroxybutyrate permease
htd2
 
Clostridium acetobutylicum ATCC 824
*
Clostridium beijerincki NCIMB 8052

Site:
position = -58
score = 4.11461
sequence = TTGAAAATACTTACAA

Gene: Cbei_3349: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555

Gene: CKL_3022: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
 
CRON 143.
uxaB
*
Clostridium acetobutylicum ATCC 824

Site:
position = -101
score = 3.91925
sequence = ATATAAAAGAATACAA

Gene: CAC0695: Altronate oxidoreductase (EC 1.1.1.58)
*2
Clostridium beijerincki NCIMB 8052

Gene: Cbei_1833: Altronate oxidoreductase (EC 1.1.1.58)

Site:
position = -261
score = 4.08388
sequence = ATATAAAATTTTAATT

Site:
position = -157
score = 3.90758
sequence = AAATAAACTTTTACTT

Site:
position = -86
score = 3.9579
sequence = ATTAAAATGATAGCAT

Gene: Cbei_1838: Altronate oxidoreductase (EC 1.1.1.58)
 
Clostridium botulinum A str. ATCC 3502
*
Clostridium butyricum 5521

Site:
position = -150
score = 4.15632
sequence = TTGAAAATATTAATTA

Site:
position = -40
score = 4.06942
sequence = ATTTAAATTATTATAT

Gene: CBY_0247: Altronate oxidoreductase (EC 1.1.1.58)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Altronate oxidoreductase (EC 1.1.1.58)
uxaA
 
Clostridium acetobutylicum ATCC 824

Gene: CAC0696: Altronate hydrolase (EC 4.2.1.7)
 
Clostridium beijerincki NCIMB 8052

Gene: Cbei_1839: Altronate hydrolase (EC 4.2.1.7)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0246: Altronate hydrolase (EC 4.2.1.7)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Altronate hydrolase (EC 4.2.1.7)
kduD
 
Clostridium acetobutylicum ATCC 824
 
Clostridium beijerincki NCIMB 8052
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521

Gene: CBY_0245: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
uxaC
*
Clostridium acetobutylicum ATCC 824

Site:
position = -335
score = 3.89784
sequence = AAATAAAAATTTATAA

Gene: CAC0692: Uronate isomerase (EC 5.3.1.12)
*3
Clostridium beijerincki NCIMB 8052

Site:
position = -254
score = 4.64795
sequence = AAGAAAAAGTTTATAT

Site:
position = -99
score = 4.07951
sequence = ATAATAAAGTTATCAA

Gene: Cbei_1832: Uronate isomerase (EC 5.3.1.12)

Site:
position = -37
score = 4.04626
sequence = ATATAAAATATTTATT

Gene: Cbei_4082: Uronate isomerase (EC 5.3.1.12)

Site:
position = -129
score = 4.02248
sequence = AAGAAAACGTTATAGT

Gene: Cbei_4657: Uronate isomerase (EC 5.3.1.12)
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Uronate isomerase (EC 5.3.1.12)
uxuT
 
Clostridium acetobutylicum ATCC 824
 2
Clostridium beijerincki NCIMB 8052

Gene: Cbei_4081: Predicted oligogalacturonide transporter

Gene: Cbei_4656: Predicted oligogalacturonide transporter
 
Clostridium botulinum A str. ATCC 3502
 
Clostridium butyricum 5521
 
Clostridium kluyveri DSM 555
 
Clostridium novyi NT
 
Clostridium perfringens ATCC 13124
 
Clostridium tetani E88
Predicted oligogalacturonide transporter
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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