Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Zur - Bacteroidaceae

Properties
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Bacteroidetes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 25 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacteroides cellulosilyticus DSM 14838 6 3
Bacteroides coprophilus DSM 18228 4 2
Bacteroides dorei DSM 17855 6 3
Bacteroides eggerthii DSM 20697 5 2
Bacteroides fragilis NCTC 9343 2 1
Bacteroides ovatus ATCC 8483 8 3
Bacteroides plebeius DSM 17135 3 1
Bacteroides stercoris ATCC 43183 5 2
Bacteroides thetaiotaomicron VPI-5482 6 3
Bacteroides uniformis ATCC 8492 5 2
Bacteroides vulgatus ATCC 8482 6 3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
czcB
*
Bacteroides cellulosilyticus DSM 14838

Site:
position = -71
score = 5.23608
sequence = CTGCAACTTTATTGCAG

Gene: BACCELL_01043: Zinc efflux system, CzcB protein
*
Bacteroides coprophilus DSM 18228

Site:
position = -102
score = 5.67483
sequence = TTGCAACCTGCTTGCAA

Gene: BACCOPRO_03244: Zinc efflux system, CzcB protein
*
Bacteroides dorei DSM 17855

Site:
position = -141
score = 5.30936
sequence = CCGCAACTTTGTTGCAT

Gene: BACDOR_03390: Zinc efflux system, CzcB protein
*
Bacteroides eggerthii DSM 20697

Site:
position = -71
score = 5.92749
sequence = ATGCAACTTGGTTGCAC

Gene: BACEGG_00329: Zinc efflux system, CzcB protein
 
Bacteroides fragilis NCTC 9343

Gene: BF3511: Zinc efflux system, CzcB protein
*
Bacteroides ovatus ATCC 8483

Site:
position = -80
score = 5.63987
sequence = ATGCAAATTAGTTGCAT

Gene: BACOVA_00676: Zinc efflux system, CzcB protein
*
Bacteroides plebeius DSM 17135

Site:
position = -20
score = 5.60653
sequence = TTGCAACCTGTTTGCAA

Gene: BACPLE_01608: Zinc efflux system, CzcB protein
*
Bacteroides stercoris ATCC 43183

Site:
position = -70
score = 5.67455
sequence = ATGCAACCCGGTTGCAC

Gene: BACSTE_03132: Zinc efflux system, CzcB protein
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -78
score = 5.69983
sequence = ATGCAAGCAAGTTGCAT

Gene: BT2038: Zinc efflux system, CzcB protein
*
Bacteroides uniformis ATCC 8492

Site:
position = -70
score = 5.62996
sequence = ATGCAATTTGGTTGCAC

Gene: BACUNI_01632: Zinc efflux system, CzcB protein
*
Bacteroides vulgatus ATCC 8482

Site:
position = -70
score = 5.30936
sequence = CCGCAACTTTGTTGCAT

Gene: BVU_2035: Zinc efflux system, CzcB protein
Zinc efflux system, CzcB protein
czcA
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_01042: Zinc efflux system, CzcA protein
 
Bacteroides coprophilus DSM 18228

Gene: BACCOPRO_03245: Zinc efflux system, CzcA protein
 
Bacteroides dorei DSM 17855

Gene: BACDOR_03391: Zinc efflux system, CzcA protein
 
Bacteroides eggerthii DSM 20697

Gene: BACEGG_00328: Zinc efflux system, CzcA protein
 
Bacteroides fragilis NCTC 9343

Gene: BF3512: Zinc efflux system, CzcA protein
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_00675: Zinc efflux system, CzcA protein
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_01609: Zinc efflux system, CzcA protein
 
Bacteroides stercoris ATCC 43183

Gene: BACSTE_03133: Zinc efflux system, CzcA protein
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT2039: Zinc efflux system, CzcA protein
 
Bacteroides uniformis ATCC 8492

Gene: BACUNI_01633: Zinc efflux system, CzcA protein
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_2036: Zinc efflux system, CzcA protein
Zinc efflux system, CzcA protein
czcC
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_01032: Zinc efflux system, CzcC protein
 
Bacteroides coprophilus DSM 18228

Gene: BACCOPRO_03246: Zinc efflux system, CzcC protein
 
Bacteroides dorei DSM 17855

Gene: BACDOR_03392: Zinc efflux system, CzcC protein
 
Bacteroides eggerthii DSM 20697

Gene: BACEGG_00327: Zinc efflux system, CzcC protein
 
Bacteroides fragilis NCTC 9343

Gene: BF3513: Zinc efflux system, CzcC protein
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_00674: Zinc efflux system, CzcC protein
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_01610: Zinc efflux system, CzcC protein
 
Bacteroides stercoris ATCC 43183

Gene: BACSTE_03134: Zinc efflux system, CzcC protein
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT2040: Zinc efflux system, CzcC protein
 
Bacteroides uniformis ATCC 8492

Gene: BACUNI_01634: Zinc efflux system, CzcC protein
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_2037: Zinc efflux system, CzcC protein
Zinc efflux system, CzcC protein
 
CRON 2.
zntA
*
Bacteroides cellulosilyticus DSM 14838

Site:
position = -61
score = 5.88817
sequence = TTGCAACCCAGTTGCAT

Gene: BACCELL_03973: Zinc-regulated zinc transporting ATPase ZntA
 
Bacteroides coprophilus DSM 18228
*
Bacteroides dorei DSM 17855

Site:
position = -58
score = 5.84358
sequence = TTGCAATTTAGTTGCAT

Gene: BACDOR_03936: Zinc-regulated zinc transporting ATPase ZntA
*
Bacteroides eggerthii DSM 20697

Site:
position = -115
score = 6.13277
sequence = TTGCAACTTGGTTGCAT

Gene: BACEGG_01379: Zinc-regulated zinc transporting ATPase ZntA
*
Bacteroides fragilis NCTC 9343

Site:
position = -64
score = 5.80085
sequence = TTGCAACTTTGTTGCAC

Gene: BF1283: Zinc-regulated zinc transporting ATPase ZntA
*
Bacteroides ovatus ATCC 8483

Site:
position = -46
score = 6.01447
sequence = TTGCAACTTTGTTGCAT

Gene: BACOVA_01601: Zinc-regulated zinc transporting ATPase ZntA
 
Bacteroides plebeius DSM 17135
*
Bacteroides stercoris ATCC 43183

Site:
position = -56
score = 6.12443
sequence = TTGCAACCTGGTTGCAT

Gene: BACSTE_01593: Zinc-regulated zinc transporting ATPase ZntA
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -56
score = 5.80085
sequence = TTGCAACTTTGTTGCAC

Gene: BT2512: Zinc-regulated zinc transporting ATPase ZntA
*
Bacteroides uniformis ATCC 8492

Site:
position = -67
score = 6.13277
sequence = TTGCAACCAAGTTGCAT

Gene: BACUNI_04663: Zinc-regulated zinc transporting ATPase ZntA
*
Bacteroides vulgatus ATCC 8482

Site:
position = -58
score = 5.84358
sequence = TTGCAATTTAGTTGCAT

Gene: BVU_2484: Zinc-regulated zinc transporting ATPase ZntA
Zinc-regulated zinc transporting ATPase ZntA
zur
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_03974: Zinc homeostasis transcriptional regulator Zur, Fur family
*
Bacteroides coprophilus DSM 18228

Site:
position = -59
score = 5.8715
sequence = TTGCAACCCGGTTGCAA

Gene: BACCOPRO_03123: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Bacteroides dorei DSM 17855

Gene: BACDOR_03935: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Bacteroides eggerthii DSM 20697

Gene: BACEGG_01378: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Bacteroides fragilis NCTC 9343

Gene: BF1284: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_01600: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_03349: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Bacteroides stercoris ATCC 43183

Gene: BACSTE_01592: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT2511: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Bacteroides uniformis ATCC 8492

Gene: BACUNI_04664: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_2483: Zinc homeostasis transcriptional regulator Zur, Fur family
Zinc homeostasis transcriptional regulator Zur, Fur family
 
CRON 3.
omp_Zn
*
Bacteroides cellulosilyticus DSM 14838

Site:
position = -62
score = 6.00614
sequence = TTGCAACCTTGTTGCAT

Gene: BACCELL_04342: putative zinc-regulated TonB-dependent outer membrane transporter
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_02155: putative zinc-regulated TonB-dependent outer membrane transporter
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343

Gene: BF2084: putative zinc-regulated TonB-dependent outer membrane transporter
*
Bacteroides ovatus ATCC 8483

Site:
position = -61
score = 6.14944
sequence = ATGCAACTAAGTTGCAT

Gene: BACOVA_04045: putative zinc-regulated TonB-dependent outer membrane transporter
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
*2
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -77
score = 5.8965
sequence = ATGCAACTCAGTTGCAA

Gene: BT1139: putative zinc-regulated TonB-dependent outer membrane transporter

Gene: BT1093: putative zinc-regulated TonB-dependent outer membrane transporter
 
Bacteroides uniformis ATCC 8492

Gene: BACUNI_02222: putative zinc-regulated TonB-dependent outer membrane transporter
 
Bacteroides vulgatus ATCC 8482
putative zinc-regulated TonB-dependent outer membrane transporter
copZ
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_04343: Possible copper binding protein, chaperone CopZ
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_02156: Possible copper binding protein, chaperone CopZ
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343

Gene: BF2085: Possible copper binding protein, chaperone CopZ
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_04046: Possible copper binding protein, chaperone CopZ
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT1092: Possible copper binding protein, chaperone CopZ
 
Bacteroides uniformis ATCC 8492

Gene: BACUNI_02223: Possible copper binding protein, chaperone CopZ
 
Bacteroides vulgatus ATCC 8482
Possible copper binding protein, chaperone CopZ
copA
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_04344: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Bacteroides coprophilus DSM 18228
*
Bacteroides dorei DSM 17855

Site:
position = -69
score = 5.70861
sequence = TTGCAACAAGATTGCAT

Gene: BACDOR_04615: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Bacteroides eggerthii DSM 20697

Gene: BACEGG_02454: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Bacteroides fragilis NCTC 9343

Gene: BF2086: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_04047: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183

Gene: BACSTE_01137: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT1091: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Bacteroides uniformis ATCC 8492

Gene: BACUNI_02224: Copper-translocating P-type ATPase (EC 3.6.3.4)
*
Bacteroides vulgatus ATCC 8482

Site:
position = -69
score = 5.70861
sequence = TTGCAACAAGATTGCAT

Gene: BVU_3023: Copper-translocating P-type ATPase (EC 3.6.3.4)
Copper-translocating P-type ATPase (EC 3.6.3.4)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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