Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DVU2359 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process:
Effector:
Phylum: Proteobacteria/delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 9 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfovibrio vulgaris Hildenborough 1 1
Desulfovibrio vulgaris str. Miyazaki F 1 1
Desulfovibrio salexigens DSM 2638
Desulfovibrio piger ATCC 29098
Desulfovibrio magneticus RS-1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio desulfuricans G20 1 1
Desulfomicrobium baculatum DSM 4028
Desulfohalobium retbaense DSM 5692
Lawsonia intracellularis PHE/MN1-00
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
DVU2357
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -539
score = 4.72751
sequence = CCGCGAAATTTCGTAA

Site:
position = -526
score = 5.59741
sequence = TAACGATATATCGCTA

Site:
position = -509
score = 5.35596
sequence = TGACGACATGTCGTCA

Gene: DVU2357: metal dependent phosphohydrolase
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -510
score = 5.73759
sequence = TTACGATATATCGTTA

Site:
position = -497
score = 5.68084
sequence = TTACGAAATTTCGTCA

Site:
position = -480
score = 5.72971
sequence = CAACGAAATTTCGTTG

Gene: DvMF_3011: metal dependent phosphohydrolase
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
*
Desulfovibrio desulfuricans G20

Site:
position = -322
score = 5.72073
sequence = CAACGAAATATCGTAA

Site:
position = -309
score = 5.80715
sequence = TAACGAAATGTCGTTG

Site:
position = -292
score = 5.76222
sequence = CAACGAAATATCGTTG

Gene: Dde_1400: metal dependent phosphohydrolase
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_3068: metal dependent phosphohydrolase
 
Desulfohalobium retbaense DSM 5692
 
Lawsonia intracellularis PHE/MN1-00
metal dependent phosphohydrolase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD