Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog LgoR - Bacteroidaceae

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: L-galactose utilization
Effector: L-galactose
Phylum: Bacteroidetes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 13 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacteroides cellulosilyticus DSM 14838 6 3
Bacteroides coprophilus DSM 18228
Bacteroides dorei DSM 17855 6 2
Bacteroides eggerthii DSM 20697 4 1
Bacteroides fragilis NCTC 9343
Bacteroides ovatus ATCC 8483 6 2
Bacteroides plebeius DSM 17135
Bacteroides stercoris ATCC 43183
Bacteroides thetaiotaomicron VPI-5482 7 3
Bacteroides uniformis ATCC 8492
Bacteroides vulgatus ATCC 8482 6 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
lgoD
*
Bacteroides cellulosilyticus DSM 14838

Site:
position = -101
score = 6.41576
sequence = TACGTAAACCATTACGTA

Gene: BACCELL_03921: L-galactose dehydrogenase (EC 1.1.1.316), NAD-dependent
 
Bacteroides coprophilus DSM 18228
*
Bacteroides dorei DSM 17855

Site:
position = -102
score = 6.29859
sequence = TACGCAAAGGTTTACGTA

Gene: BACDOR_00330: L-galactose dehydrogenase (EC 1.1.1.316), NAD-dependent
*
Bacteroides eggerthii DSM 20697

Site:
position = -94
score = 6.02629
sequence = TACGTAAACCATTACGTG

Gene: BACEGG_00150: L-galactose dehydrogenase (EC 1.1.1.316), NAD-dependent
 
Bacteroides fragilis NCTC 9343
*
Bacteroides ovatus ATCC 8483

Site:
position = -100
score = 6.1505
sequence = TACGTAAACCGTTACGTT

Gene: BACOVA_03412: L-galactose dehydrogenase (EC 1.1.1.316), NAD-dependent
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_01543: L-galactose dehydrogenase (EC 1.1.1.316), NAD-dependent
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -101
score = 6.45768
sequence = TACGTAAACCGTTACGTA

Gene: BT3614: L-galactose dehydrogenase (EC 1.1.1.316), NAD-dependent
 
Bacteroides uniformis ATCC 8492
*
Bacteroides vulgatus ATCC 8482

Site:
position = -102
score = 6.29859
sequence = TACGCAAAGGTTTACGTA

Gene: BVU_0219: L-galactose dehydrogenase (EC 1.1.1.316), NAD-dependent
L-galactose dehydrogenase (EC 1.1.1.316), NAD-dependent
lgoL
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_03922: L-galactono-1,5-lactone lactonase
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00329: L-galactono-1,5-lactone lactonase
 
Bacteroides eggerthii DSM 20697

Gene: BACEGG_00149: L-galactono-1,5-lactone lactonase
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_03413: L-galactono-1,5-lactone lactonase
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_01542: L-galactono-1,5-lactone lactonase
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT3615: L-galactono-1,5-lactone lactonase
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0220: L-galactono-1,5-lactone lactonase
L-galactono-1,5-lactone lactonase
lgoP
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_03923: Predicted L-galactose permease, FucP family
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00328: Predicted L-galactose permease, FucP family
 
Bacteroides eggerthii DSM 20697

Gene: BACEGG_00148: Predicted L-galactose permease, FucP family
 
Bacteroides fragilis NCTC 9343
 2
Bacteroides ovatus ATCC 8483

Gene: BACOVA_03415: Predicted L-galactose permease, FucP family

Gene: BACOVA_03414: Predicted L-galactose permease, FucP family
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_01541: Predicted L-galactose permease, FucP family
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT3616: Predicted L-galactose permease, FucP family
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0221: Predicted L-galactose permease, FucP family
Predicted L-galactose permease, FucP family
lgaD
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_03924: L-galactonate dehydrogenase
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00327: L-galactonate dehydrogenase
 
Bacteroides eggerthii DSM 20697

Gene: BACEGG_00147: L-galactonate dehydrogenase
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_03416: L-galactonate dehydrogenase
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_01540: L-galactonate dehydrogenase
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT3617: L-galactonate dehydrogenase
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0222: L-galactonate dehydrogenase
L-galactonate dehydrogenase
 
CRON 2.
GH43
*
Bacteroides cellulosilyticus DSM 14838

Site:
position = -148
score = 6.61647
sequence = TACGTAAAGGTTTACGTA

Gene: BACCELL_03654: Glycosyl hydrolase family 43
 
Bacteroides coprophilus DSM 18228

Gene: BACCOPRO_00059: Glycosyl hydrolase family 43
*
Bacteroides dorei DSM 17855

Site:
position = -113
score = 5.59124
sequence = TACGCAAAGGTTTGCGTG

Gene: BACDOR_00441: Glycosyl hydrolase family 43
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_00231: Glycosyl hydrolase family 43
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_00107: Glycosyl hydrolase family 43
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -157
score = 6.02629
sequence = TACGTAAAGCATTACGTG

Gene: BT4159: Glycosyl hydrolase family 43
 
Bacteroides uniformis ATCC 8492
*
Bacteroides vulgatus ATCC 8482

Site:
position = -306
score = 5.90911
sequence = TACGCAAAGGTTTACGTG

Gene: BVU_0122: Glycosyl hydrolase family 43
Glycosyl hydrolase family 43
GH28
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_02799: Endopygalactorunase, Glycosyl hydrolase family 28
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_00442: Endopygalactorunase, Glycosyl hydrolase family 28
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_05611: Endopygalactorunase, Glycosyl hydrolase family 28
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0121: Endopygalactorunase, Glycosyl hydrolase family 28
Endopygalactorunase, Glycosyl hydrolase family 28
GH35
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_00065: Glycosyl hydrolase family 35
 
Bacteroides coprophilus DSM 18228

Gene: BACCOPRO_02247: Glycosyl hydrolase family 35
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
 
Bacteroides ovatus ATCC 8483
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT4160: Glycosyl hydrolase family 35
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Glycosyl hydrolase family 35
 
CRON 3.
lgoR
*
Bacteroides cellulosilyticus DSM 14838

Site:
position = -98
score = 6.41576
sequence = TACGTAATGGTTTACGTA

Gene: BACCELL_03920: Predicted transcriptional regulator for L-galactose utilization, LacI family
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_04896: Predicted transcriptional regulator for L-galactose utilization, LacI family
 
Bacteroides eggerthii DSM 20697

Gene: BACEGG_01377: Predicted transcriptional regulator for L-galactose utilization, LacI family
 
Bacteroides fragilis NCTC 9343
*
Bacteroides ovatus ATCC 8483

Site:
position = -97
score = 6.1505
sequence = AACGTAACGGTTTACGTA

Gene: BACOVA_03411: Predicted transcriptional regulator for L-galactose utilization, LacI family
 
Bacteroides plebeius DSM 17135
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -96
score = 6.45768
sequence = TACGTAACGGTTTACGTA

Gene: BT3613: Predicted transcriptional regulator for L-galactose utilization, LacI family
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_0845: Predicted transcriptional regulator for L-galactose utilization, LacI family
Predicted transcriptional regulator for L-galactose utilization, LacI family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD