Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog UxuR - Bacteroidaceae

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Glucuronate utilization
Effector: Glucuronate
Phylum: Bacteroidetes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacteroides cellulosilyticus DSM 14838
Bacteroides coprophilus DSM 18228
Bacteroides dorei DSM 17855
Bacteroides eggerthii DSM 20697
Bacteroides fragilis NCTC 9343
Bacteroides ovatus ATCC 8483 3 1
Bacteroides plebeius DSM 17135 3 1
Bacteroides stercoris ATCC 43183
Bacteroides thetaiotaomicron VPI-5482 3 1
Bacteroides uniformis ATCC 8492
Bacteroides vulgatus ATCC 8482
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
uxuR
 
Bacteroides cellulosilyticus DSM 14838
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855
 
Bacteroides eggerthii DSM 20697
 
Bacteroides fragilis NCTC 9343
*
Bacteroides ovatus ATCC 8483

Site:
position = -79
score = 5.62319
sequence = TGTGTGTGCGCACACACT

Gene: BACOVA_00860: Predicted transcriptional regulator for glucuronate catabolism, LacI family
*
Bacteroides plebeius DSM 17135

Site:
position = -35
score = 5.64746
sequence = TGCGTGTTCGCACACACG

Gene: BACPLE_03706: Predicted transcriptional regulator for glucuronate catabolism, LacI family
 
Bacteroides stercoris ATCC 43183
*
Bacteroides thetaiotaomicron VPI-5482

Site:
position = -124
score = 5.45269
sequence = CGTGTGTGCGCACACACT

Gene: BT1434: Predicted transcriptional regulator for glucuronate catabolism, LacI family
 
Bacteroides uniformis ATCC 8492
 
Bacteroides vulgatus ATCC 8482
Predicted transcriptional regulator for glucuronate catabolism, LacI family
uxuB
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_01659: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_02114: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Bacteroides eggerthii DSM 20697

Gene: BACEGG_03381: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Bacteroides fragilis NCTC 9343

Gene: BF0143: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_00859: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_03707: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Bacteroides stercoris ATCC 43183

Gene: BACSTE_02444: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT1433: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Bacteroides uniformis ATCC 8492

Gene: BACUNI_01039: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_1261: D-mannonate oxidoreductase (EC 1.1.1.57)
D-mannonate oxidoreductase (EC 1.1.1.57)
uxuA
 
Bacteroides cellulosilyticus DSM 14838

Gene: BACCELL_01660: Mannonate dehydratase (EC 4.2.1.8)
 
Bacteroides coprophilus DSM 18228
 
Bacteroides dorei DSM 17855

Gene: BACDOR_02115: Mannonate dehydratase (EC 4.2.1.8)
 
Bacteroides eggerthii DSM 20697

Gene: BACEGG_03380: Mannonate dehydratase (EC 4.2.1.8)
 
Bacteroides fragilis NCTC 9343

Gene: BF0142: Mannonate dehydratase (EC 4.2.1.8)
 
Bacteroides ovatus ATCC 8483

Gene: BACOVA_00858: Mannonate dehydratase (EC 4.2.1.8)
 
Bacteroides plebeius DSM 17135

Gene: BACPLE_03708: Mannonate dehydratase (EC 4.2.1.8)
 
Bacteroides stercoris ATCC 43183
 
Bacteroides thetaiotaomicron VPI-5482

Gene: BT1432: Mannonate dehydratase (EC 4.2.1.8)
 
Bacteroides uniformis ATCC 8492

Gene: BACUNI_01040: Mannonate dehydratase (EC 4.2.1.8)
 
Bacteroides vulgatus ATCC 8482

Gene: BVU_1262: Mannonate dehydratase (EC 4.2.1.8)
Mannonate dehydratase (EC 4.2.1.8)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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