Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DVU2106 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Nitrogen fixation
Effector:
Phylum: Proteobacteria/delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 9 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfohalobium retbaense DSM 5692 2 1
Desulfomicrobium baculatum DSM 4028
Desulfovibrio desulfuricans G20 6 1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1 7 1
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638 7 2
Desulfovibrio vulgaris Hildenborough 6 2
Desulfovibrio vulgaris str. Miyazaki F
Lawsonia intracellularis PHE/MN1-00
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
Dret_0446
*
Desulfohalobium retbaense DSM 5692

Site:
position = -146
score = 5.05716
sequence = AGACAAATAATTCGCCC

Gene: Dret_0446: hypothetical protein
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_2301: hypothetical protein
*
Desulfovibrio desulfuricans G20

Site:
position = -128
score = 5.45713
sequence = GGGCGCGTTTCACGCCC

Site:
position = -150
score = 5.58978
sequence = GGGCGTATTATACGCCA

Gene: Dde_3197: hypothetical protein
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
*
Desulfovibrio magneticus RS-1

Site:
position = -130
score = 5.62671
sequence = GGGCTAATTATTCGCCC

Gene: DMR_11290: hypothetical protein
 
Desulfovibrio piger ATCC 29098
*
Desulfovibrio salexigens DSM 2638

Site:
position = -141
score = 5.37412
sequence = GGACGCATAATTAGCCC

Gene: Desal_0622: hypothetical protein
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -160
score = 5.69326
sequence = GGGCGTGTTTTGCGCCC

Site:
position = -129
score = 5.81415
sequence = AGGCGCATTTTACGCCC

Gene: null: hypothetical protein
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
hypothetical protein
mrp
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0440: Mrp protein (mrp)
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20

Gene: Dde_3202: Mrp protein (mrp)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_11280: Mrp protein (mrp)
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0620: Mrp protein (mrp)
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2109: Mrp protein (mrp)
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
Mrp protein (mrp)
Dbac_0447
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_0447: nitrogen-fixing NifU domain protein
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_11270: nitrogen-fixing NifU domain protein
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
nitrogen-fixing NifU domain protein
DVU2108
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0445: Dinitrogenase iron-molybdenum cofactor biosynthesis protein
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_2278: Dinitrogenase iron-molybdenum cofactor biosynthesis protein
 
Desulfovibrio desulfuricans G20

Gene: Dde_3198: Dinitrogenase iron-molybdenum cofactor biosynthesis protein
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1867: Dinitrogenase iron-molybdenum cofactor biosynthesis protein
 
Desulfovibrio magneticus RS-1

Gene: DMR_11260: Dinitrogenase iron-molybdenum cofactor biosynthesis protein
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00382: Dinitrogenase iron-molybdenum cofactor biosynthesis protein
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0621: Dinitrogenase iron-molybdenum cofactor biosynthesis protein
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2108: Dinitrogenase iron-molybdenum cofactor biosynthesis protein
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
Dinitrogenase iron-molybdenum cofactor biosynthesis protein
DVU2104
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0442: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_2277: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfovibrio desulfuricans G20

Gene: Dde_3200: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1866: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfovibrio magneticus RS-1

Gene: DMR_11250: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00383: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2514: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2104: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
DVU2103
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0441: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_2276: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfovibrio desulfuricans G20

Gene: Dde_3201: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1865: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfovibrio magneticus RS-1

Gene: DMR_11240: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00384: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2515: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2103: MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
Dbac_2275
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_2275: dinitrogenase iron-molybdenum cofactor biosynthesis domain protein
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1864: dinitrogenase iron-molybdenum cofactor biosynthesis domain protein
 
Desulfovibrio magneticus RS-1

Gene: DMR_11230: dinitrogenase iron-molybdenum cofactor biosynthesis domain protein
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00385: dinitrogenase iron-molybdenum cofactor biosynthesis domain protein
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00

Gene: LI0481: dinitrogenase iron-molybdenum cofactor biosynthesis domain protein
dinitrogenase iron-molybdenum cofactor biosynthesis domain protein
Dde_3199
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20

Gene: Dde_3199: hypothetical protein
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
hypothetical protein
Desal_2513
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
*
Desulfovibrio salexigens DSM 2638

Site:
position = -136
score = 5.61808
sequence = GGGCATATTTTTAGCCC

Gene: Desal_2513: hypothetical protein
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
hypothetical protein
Dbac_1530
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1530: Protein of unknown function CGGC region
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2516: Protein of unknown function CGGC region
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
Protein of unknown function CGGC region
DVU2105
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -137
score = 5.97008
sequence = GGGCGCATTTTGCGCCC

Gene: DVU2105: Major ampullate spidroin
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
Major ampullate spidroin
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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