Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog MetJ - Shewanellaceae

Properties
Regulator type: Transcription factor
Regulator family: MetJ
Regulation mode: repressor
Biological process: Methionine biosynthesis; Methionine metabolism
Effector: S-adenosylmethionine
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 397 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Shewanella amazonensis SB2B 13 11
Shewanella baltica OS155 19 15
Shewanella denitrificans OS217 12 11
Shewanella frigidimarina NCIMB 400 11 10
Shewanella halifaxensis HAW-EB4 13 11
Shewanella loihica PV-4 15 13
Shewanella oneidensis MR-1 14 12
Shewanella pealeana ATCC 700345 14 12
Shewanella piezotolerans WP3 13 11
Shewanella putrefaciens CN-32 18 14
Shewanella sediminis HAW-EB3 15 13
Shewanella sp ANA-3 14 12
Shewanella sp MR-4 14 12
Shewanella sp MR-7 14 12
Shewanella sp W3-18-1 18 14
Shewanella woodyi ATCC 51908 13 11
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
metB
*
Shewanella amazonensis SB2B

Site:
position = -105
score = 7.34427
sequence = AGACGTCT-(0)-AAACGTCT

Site:
position = -50
score = 6.48188
sequence = AGCCATCC-(0)-AGACATCT

Gene: Sama_3171: Cystathionine gamma-synthase (EC 2.5.1.48)
*
Shewanella baltica OS155

Site:
position = -102
score = 7.34427
sequence = AGACGTCT-(0)-AAACGTCT

Site:
position = -47
score = 7.17902
sequence = AGACGTCC-(0)-AGACATCT

Gene: Sbal_3776: Cystathionine gamma-synthase (EC 2.5.1.48)
*
Shewanella denitrificans OS217

Site:
position = -40
score = 6.73714
sequence = AGCCATCT-(0)-AGACATCT

Site:
position = -93
score = 5.9163
sequence = GGACGTTT-(0)-AGATGGCT

Gene: Sden_0615: Cystathionine gamma-synthase (EC 2.5.1.48)
*
Shewanella frigidimarina NCIMB 400

Site:
position = -102
score = 7.34427
sequence = AGACGTCT-(0)-AAACGTCT

Site:
position = -49
score = 7.05949
sequence = GGACGTCT-(0)-AGACATCT

Gene: Sfri_3551: Cystathionine gamma-synthase (EC 2.5.1.48)
*
Shewanella halifaxensis HAW-EB4

Site:
position = -50
score = 7.17902
sequence = AGACGTCC-(0)-AGACATCT

Site:
position = -103
score = 6.34334
sequence = GGACGTCT-(0)-AAACGGCT

Gene: Shal_0622: Cystathionine gamma-synthase (EC 2.5.1.48)
*
Shewanella loihica PV-4

Site:
position = -61
score = 7.17902
sequence = AGACGTCC-(0)-AGACATCT

Site:
position = -115
score = 6.71423
sequence = GGACGTCT-(0)-AAACGTCC

Gene: Shew_0520: Cystathionine gamma-synthase (EC 2.5.1.48)
*
Shewanella oneidensis MR-1

Site:
position = -93
score = 7.34427
sequence = AGACGTCT-(0)-AAACGTCT

Site:
position = -38
score = 7.17902
sequence = AGACGTCC-(0)-AGACATCT

Gene: SO4056: Cystathionine gamma-synthase (EC 2.5.1.48)
*
Shewanella pealeana ATCC 700345

Site:
position = -103
score = 6.34334
sequence = GGACGTCT-(0)-AAACGGCT

Site:
position = -50
score = 6.72953
sequence = AGCCGTCC-(0)-AGACATCT

Gene: Spea_0560: Cystathionine gamma-synthase (EC 2.5.1.48)
*
Shewanella piezotolerans WP3

Site:
position = -101
score = 6.34334
sequence = GGACGTCT-(0)-AAACGGCT

Site:
position = -48
score = 6.92376
sequence = AGACGTCC-(0)-AGACATCC

Gene: swp_4557: Cystathionine gamma-synthase (EC 2.5.1.48)
*
Shewanella putrefaciens CN-32

Site:
position = -47
score = 7.17902
sequence = AGACGTCC-(0)-AGACATCT

Site:
position = -102
score = 7.34427
sequence = AGACGTCT-(0)-AAACGTCT

Gene: Sputcn32_0616: Cystathionine gamma-synthase (EC 2.5.1.48)
*
Shewanella sediminis HAW-EB3

Site:
position = -71
score = 7.17902
sequence = AGACGTCC-(0)-AGACATCT

Site:
position = -125
score = 5.99128
sequence = GGACGTCT-(0)-AAATGGCT

Gene: Ssed_4041: Cystathionine gamma-synthase (EC 2.5.1.48)
*
Shewanella sp ANA-3

Site:
position = -94
score = 7.34427
sequence = AGACGTCT-(0)-AAACGTCT

Site:
position = -39
score = 7.17902
sequence = AGACGTCC-(0)-AGACATCT

Gene: Shewana3_3614: Cystathionine gamma-synthase (EC 2.5.1.48)
*
Shewanella sp MR-4

Site:
position = -39
score = 7.17902
sequence = AGACGTCC-(0)-AGACATCT

Site:
position = -94
score = 7.34427
sequence = AGACGTCT-(0)-AAACGTCT

Gene: Shewmr4_3439: Cystathionine gamma-synthase (EC 2.5.1.48)
*
Shewanella sp MR-7

Site:
position = -94
score = 7.34427
sequence = AGACGTCT-(0)-AAACGTCT

Site:
position = -39
score = 7.17902
sequence = AGACGTCC-(0)-AGACATCT

Gene: Shewmr7_0512: Cystathionine gamma-synthase (EC 2.5.1.48)
*
Shewanella sp W3-18-1

Site:
position = -102
score = 7.34427
sequence = AGACGTCT-(0)-AAACGTCT

Site:
position = -47
score = 7.17902
sequence = AGACGTCC-(0)-AGACATCT

Gene: Sputw3181_3554: Cystathionine gamma-synthase (EC 2.5.1.48)
*
Shewanella woodyi ATCC 51908

Site:
position = -72
score = 7.17902
sequence = AGACGTCC-(0)-AGACATCT

Site:
position = -124
score = 6.96949
sequence = GGACGTCT-(0)-AAACGTCT

Gene: Swoo_0622: Cystathionine gamma-synthase (EC 2.5.1.48)
Cystathionine gamma-synthase (EC 2.5.1.48)
metL
 
Shewanella amazonensis SB2B

Gene: Sama_3170: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
Shewanella baltica OS155

Gene: Sbal_3775: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
Shewanella denitrificans OS217

Gene: Sden_0616: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
Shewanella frigidimarina NCIMB 400

Gene: Sfri_3550: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
Shewanella halifaxensis HAW-EB4

Gene: Shal_0623: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
Shewanella loihica PV-4

Gene: Shew_0521: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
Shewanella oneidensis MR-1

Gene: SO4055: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
Shewanella pealeana ATCC 700345

Gene: Spea_0561: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
Shewanella piezotolerans WP3

Gene: swp_4556: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
Shewanella putrefaciens CN-32

Gene: Sputcn32_0617: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
Shewanella sediminis HAW-EB3

Gene: Ssed_4040: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
Shewanella sp ANA-3

Gene: Shewana3_3613: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
Shewanella sp MR-4

Gene: Shewmr4_3438: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
Shewanella sp MR-7

Gene: Shewmr7_0513: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
Shewanella sp W3-18-1

Gene: Sputw3181_3553: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
Shewanella woodyi ATCC 51908

Gene: Swoo_0623: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
 
CRON 2.
metF
*
Shewanella amazonensis SB2B

Site:
position = -49
score = 5.95863
sequence = GGCCATAT-(0)-AGACGTCC

Site:
position = -41
score = 6.83376
sequence = AGACGTCC-(0)-AAACGTCC

Gene: Sama_3169: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
*
Shewanella baltica OS155

Site:
position = -81
score = 6.40812
sequence = GGACATAT-(0)-AGACGTCC

Site:
position = -73
score = 6.83376
sequence = AGACGTCC-(0)-AAACGTCC

Gene: Sbal_3774: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
*
Shewanella denitrificans OS217

Site:
position = -69
score = 5.6279
sequence = GGCTATCT-(0)-GGACGTCC

Site:
position = -61
score = 5.73602
sequence = GGACGTCC-(0)-AAATGGCT

Gene: Sden_0642: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
*
Shewanella frigidimarina NCIMB 400

Site:
position = -102
score = 6.40812
sequence = GGACATAT-(0)-AGACGTCC

Site:
position = -94
score = 6.46287
sequence = AGACGTCC-(0)-AAACGGCT

Gene: Sfri_3547: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
*
Shewanella halifaxensis HAW-EB4

Site:
position = -65
score = 6.40812
sequence = GGACATAT-(0)-AGACGTCC

Site:
position = -57
score = 7.08902
sequence = AGACGTCC-(0)-AAACGTCT

Gene: Shal_0624: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
*
Shewanella loihica PV-4

Site:
position = -58
score = 6.40812
sequence = GGACATAT-(0)-AGACGTCC

Site:
position = -50
score = 7.08902
sequence = AGACGTCC-(0)-AAACGTCT

Gene: Shew_0522: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
*
Shewanella oneidensis MR-1

Site:
position = -100
score = 6.40812
sequence = GGACATAT-(0)-AGACGTCC

Site:
position = -92
score = 6.83376
sequence = AGACGTCC-(0)-AAACGTCC

Gene: SO4054: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
*
Shewanella pealeana ATCC 700345

Site:
position = -68
score = 6.40812
sequence = GGACATAT-(0)-AGACGTCC

Site:
position = -60
score = 7.08902
sequence = AGACGTCC-(0)-AAACGTCT

Gene: Spea_0562: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
 
Shewanella piezotolerans WP3
*
Shewanella putrefaciens CN-32

Site:
position = -100
score = 5.9678
sequence = GGACATGT-(0)-AGACGTCC

Site:
position = -92
score = 6.83376
sequence = AGACGTCC-(0)-AAACGTCC

Gene: Sputcn32_0618: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
*
Shewanella sediminis HAW-EB3

Site:
position = -71
score = 6.30371
sequence = GGATGTAT-(0)-AGACGTCC

Site:
position = -63
score = 7.08902
sequence = AGACGTCC-(0)-AAACGTCT

Gene: Ssed_4039: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
*
Shewanella sp ANA-3

Site:
position = -101
score = 6.40812
sequence = GGACATAT-(0)-AGACGTCC

Site:
position = -93
score = 6.83376
sequence = AGACGTCC-(0)-AAACGTCC

Gene: Shewana3_3612: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
*
Shewanella sp MR-4

Site:
position = -101
score = 6.40812
sequence = GGACATAT-(0)-AGACGTCC

Site:
position = -93
score = 6.83376
sequence = AGACGTCC-(0)-AAACGTCC

Gene: Shewmr4_3437: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
*
Shewanella sp MR-7

Site:
position = -101
score = 6.40812
sequence = GGACATAT-(0)-AGACGTCC

Site:
position = -93
score = 6.83376
sequence = AGACGTCC-(0)-AAACGTCC

Gene: Shewmr7_0514: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
*
Shewanella sp W3-18-1

Site:
position = -100
score = 5.9678
sequence = GGACATGT-(0)-AGACGTCC

Site:
position = -92
score = 6.83376
sequence = AGACGTCC-(0)-AAACGTCC

Gene: Sputw3181_3552: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
*
Shewanella woodyi ATCC 51908

Site:
position = -92
score = 6.30371
sequence = GGATGTAT-(0)-AGACGTCC

Site:
position = -84
score = 7.08902
sequence = AGACGTCC-(0)-AAACGTCT

Gene: Swoo_0624: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
 
CRON 3.
metJ
*
Shewanella amazonensis SB2B

Site:
position = -117
score = 6.33315
sequence = AGACGTCT-(0)-AAACGTAA

Site:
position = -125
score = 7.26929
sequence = AGACGTTT-(0)-AGACGTCT

Site:
position = -180
score = 5.97687
sequence = AGATGTCT-(0)-GGATGGCT

Gene: Sama_3172: S-adenosylmethionine-responsive transcriptional repressor MetJ
*
Shewanella baltica OS155

Site:
position = -118
score = 5.71072
sequence = AGACGTCT-(0)-GAACATAA

Site:
position = -126
score = 7.26929
sequence = AGACGTTT-(0)-AGACGTCT

Site:
position = -173
score = 5.96606
sequence = GGACGTCT-(0)-AAATGTAC

Site:
position = -181
score = 6.95508
sequence = AGATGTCT-(0)-GGACGTCT

Gene: Sbal_3777: S-adenosylmethionine-responsive transcriptional repressor MetJ
*
Shewanella denitrificans OS217

Site:
position = -123
score = 6.39188
sequence = AGCCATCT-(0)-AAACGTCC

Site:
position = -176
score = 6.35166
sequence = AGATGTCT-(0)-AGATGGCT

Gene: Sden_0614: S-adenosylmethionine-responsive transcriptional repressor MetJ
*
Shewanella frigidimarina NCIMB 400

Site:
position = -107
score = 5.74381
sequence = AAACATCA-(0)-AGAAATCT

Site:
position = -115
score = 6.48161
sequence = AGACGTCT-(0)-AAACATCA

Site:
position = -123
score = 7.26929
sequence = AGACGTTT-(0)-AGACGTCT

Site:
position = -176
score = 7.07461
sequence = AGATGTCT-(0)-AGACGTCC

Site:
position = -168
score = 5.63382
sequence = AGACGTCC-(0)-AAATTTAC

Gene: Sfri_3552: S-adenosylmethionine-responsive transcriptional repressor MetJ
*
Shewanella halifaxensis HAW-EB4

Site:
position = -169
score = 5.96606
sequence = GGACGTCT-(0)-AAATGTAC

Site:
position = -124
score = 6.56454
sequence = AGCCGTTT-(0)-AGACGTCC

Site:
position = -177
score = 6.95508
sequence = AGATGTCT-(0)-GGACGTCT

Gene: Shal_0621: S-adenosylmethionine-responsive transcriptional repressor MetJ
*
Shewanella loihica PV-4

Site:
position = -109
score = 5.94618
sequence = AAACATTT-(0)-AGAAATCT

Site:
position = -117
score = 6.42873
sequence = AGACGTCC-(0)-AAACATTT

Site:
position = -125
score = 6.63924
sequence = GGACGTTT-(0)-AGACGTCC

Site:
position = -171
score = 5.96606
sequence = GGACGTCT-(0)-AAATGTAC

Site:
position = -179
score = 6.95508
sequence = AGATGTCT-(0)-GGACGTCT

Gene: Shew_0519: S-adenosylmethionine-responsive transcriptional repressor MetJ
*
Shewanella oneidensis MR-1

Site:
position = -118
score = 6.0855
sequence = AGACGTCT-(0)-AAACATAA

Site:
position = -126
score = 7.26929
sequence = AGACGTTT-(0)-AGACGTCT

Site:
position = -134
score = 5.61791
sequence = AGGCGTTA-(0)-AGACGTTT

Site:
position = -173
score = 5.96606
sequence = GGACGTCT-(0)-AAATGTAC

Site:
position = -181
score = 6.95508
sequence = AGATGTCT-(0)-GGACGTCT

Gene: SO4057: S-adenosylmethionine-responsive transcriptional repressor MetJ
*
Shewanella pealeana ATCC 700345

Site:
position = -124
score = 6.56454
sequence = AGCCGTTT-(0)-AGACGTCC

Site:
position = -177
score = 6.32893
sequence = AGATGTCT-(0)-GGACGGCT

Gene: Spea_0559: S-adenosylmethionine-responsive transcriptional repressor MetJ
*
Shewanella piezotolerans WP3

Site:
position = -124
score = 6.56454
sequence = AGCCGTTT-(0)-AGACGTCC

Site:
position = -116
score = 5.805
sequence = AGACGTCC-(0)-AAGCATTT

Site:
position = -169
score = 5.96606
sequence = GGACGTCT-(0)-AAATGTAC

Site:
position = -177
score = 6.58029
sequence = GGATGTCT-(0)-GGACGTCT

Gene: swp_4558: S-adenosylmethionine-responsive transcriptional repressor MetJ
*
Shewanella putrefaciens CN-32

Site:
position = -118
score = 6.0855
sequence = AGACGTCT-(0)-AAACATAA

Site:
position = -126
score = 7.26929
sequence = AGACGTTT-(0)-AGACGTCT

Site:
position = -173
score = 5.96606
sequence = GGACGTCT-(0)-AAATGTAC

Site:
position = -181
score = 6.95508
sequence = AGATGTCT-(0)-GGACGTCT

Site:
position = -134
score = 5.61791
sequence = AGGCGTTA-(0)-AGACGTTT

Gene: Sputcn32_0615: S-adenosylmethionine-responsive transcriptional repressor MetJ
*
Shewanella sediminis HAW-EB3

Site:
position = -178
score = 6.95508
sequence = AGATGTCT-(0)-GGACGTCT

Site:
position = -170
score = 5.96606
sequence = GGACGTCT-(0)-AAATGTAC

Site:
position = -124
score = 6.31689
sequence = AGCCATTT-(0)-AGACGTCC

Site:
position = -108
score = 5.96271
sequence = AAACATAT-(0)-AGAAATCT

Site:
position = -116
score = 6.44526
sequence = AGACGTCC-(0)-AAACATAT

Gene: Ssed_4042: S-adenosylmethionine-responsive transcriptional repressor MetJ
*
Shewanella sp ANA-3

Site:
position = -118
score = 6.0855
sequence = AGACGTCT-(0)-AAACATAA

Site:
position = -126
score = 7.26929
sequence = AGACGTTT-(0)-AGACGTCT

Site:
position = -134
score = 5.61791
sequence = AGGCGTTA-(0)-AGACGTTT

Site:
position = -173
score = 5.96606
sequence = GGACGTCT-(0)-AAATGTAC

Site:
position = -181
score = 6.95508
sequence = AGATGTCT-(0)-GGACGTCT

Gene: Shewana3_3615: S-adenosylmethionine-responsive transcriptional repressor MetJ
*
Shewanella sp MR-4

Site:
position = -181
score = 6.95508
sequence = AGATGTCT-(0)-GGACGTCT

Site:
position = -118
score = 6.0855
sequence = AGACGTCT-(0)-AAACATAA

Site:
position = -126
score = 7.26929
sequence = AGACGTTT-(0)-AGACGTCT

Site:
position = -134
score = 5.61791
sequence = AGGCGTTA-(0)-AGACGTTT

Site:
position = -173
score = 5.96606
sequence = GGACGTCT-(0)-AAATGTAC

Gene: Shewmr4_3440: S-adenosylmethionine-responsive transcriptional repressor MetJ
*
Shewanella sp MR-7

Site:
position = -118
score = 6.0855
sequence = AGACGTCT-(0)-AAACATAA

Site:
position = -181
score = 6.95508
sequence = AGATGTCT-(0)-GGACGTCT

Site:
position = -173
score = 5.96606
sequence = GGACGTCT-(0)-AAATGTAC

Site:
position = -126
score = 7.26929
sequence = AGACGTTT-(0)-AGACGTCT

Site:
position = -134
score = 5.61791
sequence = AGGCGTTA-(0)-AGACGTTT

Gene: Shewmr7_0511: S-adenosylmethionine-responsive transcriptional repressor MetJ
*
Shewanella sp W3-18-1

Site:
position = -118
score = 6.0855
sequence = AGACGTCT-(0)-AAACATAA

Site:
position = -126
score = 7.26929
sequence = AGACGTTT-(0)-AGACGTCT

Site:
position = -134
score = 5.61791
sequence = AGGCGTTA-(0)-AGACGTTT

Site:
position = -173
score = 5.96606
sequence = GGACGTCT-(0)-AAATGTAC

Site:
position = -181
score = 6.95508
sequence = AGATGTCT-(0)-GGACGTCT

Gene: Sputw3181_3555: S-adenosylmethionine-responsive transcriptional repressor MetJ
*
Shewanella woodyi ATCC 51908

Site:
position = -168
score = 5.96606
sequence = GGACGTCT-(0)-AAATGTAC

Site:
position = -124
score = 7.01403
sequence = AGACGTTT-(0)-AGACGTCC

Site:
position = -116
score = 6.07047
sequence = AGACGTCC-(0)-GAACATAT

Site:
position = -176
score = 6.95508
sequence = AGATGTCT-(0)-GGACGTCT

Gene: Swoo_0621: S-adenosylmethionine-responsive transcriptional repressor MetJ
S-adenosylmethionine-responsive transcriptional repressor MetJ
 
CRON 4.
msrA
*
Shewanella amazonensis SB2B

Site:
position = -28
score = 6.47427
sequence = AGCCGTCC-(0)-AGACATCC

Gene: Sama_1707: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*2
Shewanella baltica OS155

Site:
position = -29
score = 6.53302
sequence = AGCCATCT-(0)-AGACTTCT

Gene: Sbal_4510: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)

Site:
position = -29
score = 6.53302
sequence = AGCCATCT-(0)-AGACTTCT

Gene: Sbal_2224: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Shewanella denitrificans OS217

Site:
position = -109
score = 7.23015
sequence = AGACGTCT-(0)-AGACTTCT

Gene: Sden_1784: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Shewanella frigidimarina NCIMB 400

Site:
position = -39
score = 6.53302
sequence = AGCCATCT-(0)-AGACTTCT

Gene: Sfri_1933: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Shewanella halifaxensis HAW-EB4

Site:
position = -63
score = 5.0452
sequence = AGCCATCT-(0)-AAGTGGCT

Site:
position = -71
score = 6.98479
sequence = AGACGTCT-(0)-AGCCATCT

Gene: Shal_2236: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Shewanella loihica PV-4

Site:
position = -128
score = 6.5353
sequence = AGCCGTCT-(0)-AGCCATCT

Site:
position = -120
score = 6.25102
sequence = AGCCATCT-(0)-AAACGTAT

Gene: Shew_1923: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Shewanella oneidensis MR-1

Site:
position = -29
score = 6.53302
sequence = AGCCATCT-(0)-AGACTTCT

Gene: SO2337: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Shewanella pealeana ATCC 700345

Site:
position = -45
score = 5.76573
sequence = AGCCATCC-(0)-AAACGGCT

Site:
position = -53
score = 6.48188
sequence = AGACATCT-(0)-AGCCATCC

Gene: Spea_2248: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Shewanella piezotolerans WP3

Site:
position = -38
score = 5.76573
sequence = AGCCATCC-(0)-AAACGGCT

Site:
position = -46
score = 6.48188
sequence = AGACATCT-(0)-AGCCATCC

Gene: swp_2608: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Shewanella putrefaciens CN-32

Site:
position = -29
score = 6.53302
sequence = AGCCATCT-(0)-AGACTTCT

Gene: Sputcn32_1883: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Shewanella sediminis HAW-EB3

Site:
position = -79
score = 6.72953
sequence = AGACATCT-(0)-AGCCGTCC

Site:
position = -71
score = 6.30928
sequence = AGCCGTCC-(0)-AGACGTTC

Gene: Ssed_2331: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Shewanella sp ANA-3

Site:
position = -29
score = 6.53302
sequence = AGCCATCT-(0)-AGACTTCT

Gene: Shewana3_2133: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Shewanella sp MR-4

Site:
position = -29
score = 6.53302
sequence = AGCCATCT-(0)-AGACTTCT

Gene: Shewmr4_2030: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Shewanella sp MR-7

Site:
position = -29
score = 6.53302
sequence = AGCCATCT-(0)-AGACTTCT

Gene: Shewmr7_1945: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Shewanella sp W3-18-1

Site:
position = -29
score = 6.53302
sequence = AGCCATCT-(0)-AGACTTCT

Gene: Sputw3181_2125: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Shewanella woodyi ATCC 51908

Site:
position = -65
score = 5.46193
sequence = GGACGGCT-(0)-AAACGGCC

Site:
position = -73
score = 6.17809
sequence = AGACATCC-(0)-GGACGGCT

Gene: Swoo_2276: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
 
CRON 5.
metT
*
Shewanella amazonensis SB2B

Site:
position = -131
score = 5.27974
sequence = AGATGGCT-(0)-GGCTATCT

Site:
position = -155
score = 6.64713
sequence = AACCATCT-(0)-AGACGTCT

Gene: Sama_2935: Methionine transporter MetT, NhaC antiporter family
*
Shewanella baltica OS155

Site:
position = -153
score = 7.09663
sequence = AAACATCT-(0)-AGACGTCT

Site:
position = -145
score = 5.26293
sequence = AGACGTCT-(0)-AAATTGAC

Gene: Sbal_0903: Methionine transporter MetT, NhaC antiporter family
*
Shewanella denitrificans OS217

Site:
position = -151
score = 6.93651
sequence = AGAAGTCT-(0)-AGACGTCC

Gene: Sden_0687: Methionine transporter MetT, NhaC antiporter family
*
Shewanella frigidimarina NCIMB 400

Site:
position = -187
score = 7.19176
sequence = AGAAGTCT-(0)-AGACGTCT

Site:
position = -179
score = 5.60058
sequence = AGACGTCT-(0)-AGATTGAC

Gene: Sfri_0570: Methionine transporter MetT, NhaC antiporter family
*
Shewanella halifaxensis HAW-EB4

Site:
position = -91
score = 7.09663
sequence = AAACATCT-(0)-AGACGTCT

Site:
position = -83
score = 5.26293
sequence = AGACGTCT-(0)-AAATTGAC

Gene: Shal_0735: Methionine transporter MetT, NhaC antiporter family
*
Shewanella loihica PV-4

Site:
position = -172
score = 7.09663
sequence = AAACATCT-(0)-AGACGTCT

Site:
position = -164
score = 5.26293
sequence = AGACGTCT-(0)-AAATTGAC

Gene: Shew_3178: Methionine transporter MetT, NhaC antiporter family
*
Shewanella oneidensis MR-1

Site:
position = -152
score = 6.84137
sequence = AAACATCC-(0)-AGACGTCT

Site:
position = -144
score = 5.60058
sequence = AGACGTCT-(0)-AGATTGAC

Gene: SO1087: Methionine transporter MetT, NhaC antiporter family
*
Shewanella pealeana ATCC 700345

Site:
position = -100
score = 7.09663
sequence = AAACATCT-(0)-AGACGTCT

Site:
position = -92
score = 5.26293
sequence = AGACGTCT-(0)-AAATTGAC

Gene: Spea_0677: Methionine transporter MetT, NhaC antiporter family
*
Shewanella piezotolerans WP3

Site:
position = -165
score = 7.09663
sequence = AAACATCT-(0)-AGACGTCT

Site:
position = -157
score = 5.26293
sequence = AGACGTCT-(0)-AAATTGAC

Gene: swp_4410: Methionine transporter MetT, NhaC antiporter family
*
Shewanella putrefaciens CN-32

Site:
position = -153
score = 7.09663
sequence = AAACATCT-(0)-AGACGTCT

Site:
position = -145
score = 5.26293
sequence = AGACGTCT-(0)-AAATTGAC

Gene: Sputcn32_0924: Methionine transporter MetT, NhaC antiporter family
*
Shewanella sediminis HAW-EB3

Site:
position = -199
score = 5.59534
sequence = AGAAGTAA-(0)-AAACATCT

Site:
position = -191
score = 7.09663
sequence = AAACATCT-(0)-AGACGTCT

Site:
position = -167
score = 6.32229
sequence = AGACGTCT-(0)-ATAAATCT

Gene: Ssed_3934: Methionine transporter MetT, NhaC antiporter family
*
Shewanella sp ANA-3

Site:
position = -152
score = 7.09663
sequence = AAACATCT-(0)-AGACGTCT

Site:
position = -144
score = 5.60058
sequence = AGACGTCT-(0)-AGATTGAC

Gene: Shewana3_0918: Methionine transporter MetT, NhaC antiporter family
*
Shewanella sp MR-4

Site:
position = -152
score = 7.09663
sequence = AAACATCT-(0)-AGACGTCT

Site:
position = -144
score = 5.60058
sequence = AGACGTCT-(0)-AGATTGAC

Gene: Shewmr4_0919: Methionine transporter MetT, NhaC antiporter family
*
Shewanella sp MR-7

Site:
position = -152
score = 7.09663
sequence = AAACATCT-(0)-AGACGTCT

Site:
position = -144
score = 5.60058
sequence = AGACGTCT-(0)-AGATTGAC

Gene: Shewmr7_0954: Methionine transporter MetT, NhaC antiporter family
*
Shewanella sp W3-18-1

Site:
position = -101
score = 7.09663
sequence = AAACATCT-(0)-AGACGTCT

Site:
position = -93
score = 5.26293
sequence = AGACGTCT-(0)-AAATTGAC

Gene: Sputw3181_3252: Methionine transporter MetT, NhaC antiporter family
*
Shewanella woodyi ATCC 51908

Site:
position = -191
score = 5.59534
sequence = AGAAGTAA-(0)-AAACATCT

Site:
position = -183
score = 7.09663
sequence = AAACATCT-(0)-AGACGTCT

Gene: Swoo_3871: Methionine transporter MetT, NhaC antiporter family
Methionine transporter MetT, NhaC antiporter family
 
CRON 6.
COG3126
*
Shewanella amazonensis SB2B

Site:
position = -43
score = 6.68886
sequence = AGACATCC-(0)-AGAAGTCT

Site:
position = -51
score = 6.05606
sequence = GGATGTAT-(0)-AGACATCC

Gene: Sama_1373: Lipoprotein-related protein
*
Shewanella baltica OS155

Site:
position = -48
score = 5.66486
sequence = GGGCGTAT-(0)-GGACATCT

Site:
position = -40
score = 6.56933
sequence = GGACATCT-(0)-AGAAGTCT

Gene: Sbal_1492: Lipoprotein-related protein
 
Shewanella denitrificans OS217
 
Shewanella frigidimarina NCIMB 400
*
Shewanella halifaxensis HAW-EB4

Site:
position = -48
score = 5.95635
sequence = GGACATAT-(0)-AGACTTCC

Site:
position = -40
score = 6.62284
sequence = AGACTTCC-(0)-AGATGTCT

Site:
position = -32
score = 5.42144
sequence = AGATGTCT-(0)-TAATGTAT

Gene: Shal_2885: Lipoprotein-related protein
*
Shewanella loihica PV-4

Site:
position = -48
score = 6.16047
sequence = AGACATAT-(0)-GGACATCC

Site:
position = -40
score = 6.31407
sequence = GGACATCC-(0)-AGAAGTCT

Site:
position = -32
score = 5.62099
sequence = AGAAGTCT-(0)-TGATGTAT

Gene: Shew_2552: Lipoprotein-related protein
*
Shewanella oneidensis MR-1

Site:
position = -97
score = 6.68886
sequence = AGACATCC-(0)-AGAAGTCT

Gene: SO1675: Lipoprotein-related protein
*
Shewanella pealeana ATCC 700345

Site:
position = -32
score = 5.62099
sequence = AGAAGTCT-(0)-TGATGTAT

Site:
position = -48
score = 5.95635
sequence = GGACATAT-(0)-AGACTTCC

Site:
position = -40
score = 6.48474
sequence = AGACTTCC-(0)-AGAAGTCT

Gene: Spea_2785: Lipoprotein-related protein
*
Shewanella piezotolerans WP3

Site:
position = -48
score = 6.21161
sequence = GGACATAT-(0)-AGACTTCT

Site:
position = -40
score = 6.73999
sequence = AGACTTCT-(0)-AGAAGTCT

Site:
position = -32
score = 5.62099
sequence = AGAAGTCT-(0)-TGATGTAT

Gene: swp_3393: Lipoprotein-related protein
*
Shewanella putrefaciens CN-32

Site:
position = -48
score = 5.34537
sequence = GGACATGT-(0)-GGACATCC

Site:
position = -40
score = 6.31407
sequence = GGACATCC-(0)-AGAAGTCT

Gene: Sputcn32_1394: Lipoprotein-related protein
*
Shewanella sediminis HAW-EB3

Site:
position = -48
score = 5.72015
sequence = GGACATGT-(0)-AGACATCC

Site:
position = -40
score = 6.68886
sequence = AGACATCC-(0)-AGAAGTCT

Site:
position = -32
score = 5.62099
sequence = AGAAGTCT-(0)-TGATGTAT

Gene: Ssed_1471: Lipoprotein-related protein
*
Shewanella sp ANA-3

Site:
position = -48
score = 5.78439
sequence = GGGCGTAT-(0)-AGACATCC

Site:
position = -40
score = 6.68886
sequence = AGACATCC-(0)-AGAAGTCT

Gene: Shewana3_2773: Lipoprotein-related protein
*
Shewanella sp MR-4

Site:
position = -48
score = 6.15918
sequence = AGGCGTAT-(0)-AGACATCC

Site:
position = -40
score = 6.68886
sequence = AGACATCC-(0)-AGAAGTCT

Gene: Shewmr4_2599: Lipoprotein-related protein
*
Shewanella sp MR-7

Site:
position = -48
score = 6.15918
sequence = AGGCGTAT-(0)-AGACATCC

Site:
position = -40
score = 6.68886
sequence = AGACATCC-(0)-AGAAGTCT

Gene: Shewmr7_2666: Lipoprotein-related protein
*
Shewanella sp W3-18-1

Site:
position = -48
score = 5.34537
sequence = GGACATGT-(0)-GGACATCC

Site:
position = -40
score = 6.31407
sequence = GGACATCC-(0)-AGAAGTCT

Gene: Sputw3181_2707: Lipoprotein-related protein
*
Shewanella woodyi ATCC 51908

Site:
position = -50
score = 6.16047
sequence = GGACATAT-(0)-AGACATCC

Site:
position = -42
score = 6.68886
sequence = AGACATCC-(0)-AGAAGTCT

Site:
position = -34
score = 5.62099
sequence = AGAAGTCT-(0)-TGATGTAT

Gene: Swoo_3205: Lipoprotein-related protein
Lipoprotein-related protein
metA
 
Shewanella amazonensis SB2B

Gene: Sama_1374: Homoserine O-succinyltransferase (EC 2.3.1.46)
 
Shewanella baltica OS155

Gene: Sbal_1493: Homoserine O-succinyltransferase (EC 2.3.1.46)
*
Shewanella denitrificans OS217

Site:
position = -69
score = 7.17902
sequence = AGACATCT-(0)-AGACGTCC

Gene: Sden_2588: Homoserine O-succinyltransferase (EC 2.3.1.46)
*
Shewanella frigidimarina NCIMB 400

Site:
position = -284
score = 6.39372
sequence = AGACGTGT-(0)-AGACTTCT

Site:
position = -276
score = 6.27776
sequence = AGACTTCT-(0)-AGCCATCC

Gene: Sfri_1336: Homoserine O-succinyltransferase (EC 2.3.1.46)
 
Shewanella halifaxensis HAW-EB4

Gene: Shal_2884: Homoserine O-succinyltransferase (EC 2.3.1.46)
 
Shewanella loihica PV-4

Gene: Shew_2551: Homoserine O-succinyltransferase (EC 2.3.1.46)
 
Shewanella oneidensis MR-1

Gene: SO1676: Homoserine O-succinyltransferase (EC 2.3.1.46)
 
Shewanella pealeana ATCC 700345

Gene: Spea_2784: Homoserine O-succinyltransferase (EC 2.3.1.46)
 
Shewanella piezotolerans WP3

Gene: swp_3392: Homoserine O-succinyltransferase (EC 2.3.1.46)
 
Shewanella putrefaciens CN-32

Gene: Sputcn32_1395: Homoserine O-succinyltransferase (EC 2.3.1.46)
 
Shewanella sediminis HAW-EB3

Gene: Ssed_1472: Homoserine O-succinyltransferase (EC 2.3.1.46)
 
Shewanella sp ANA-3

Gene: Shewana3_2772: Homoserine O-succinyltransferase (EC 2.3.1.46)
 
Shewanella sp MR-4

Gene: Shewmr4_2598: Homoserine O-succinyltransferase (EC 2.3.1.46)
 
Shewanella sp MR-7

Gene: Shewmr7_2665: Homoserine O-succinyltransferase (EC 2.3.1.46)
 
Shewanella sp W3-18-1

Gene: Sputw3181_2706: Homoserine O-succinyltransferase (EC 2.3.1.46)
 
Shewanella woodyi ATCC 51908

Gene: Swoo_3204: Homoserine O-succinyltransferase (EC 2.3.1.46)
Homoserine O-succinyltransferase (EC 2.3.1.46)
 
CRON 7.
metH
*
Shewanella amazonensis SB2B

Site:
position = -127
score = 6.2892
sequence = GGACGTCT-(0)-ATACGTAT

Site:
position = -119
score = 5.71902
sequence = ATACGTAT-(0)-AAATGTCC

Gene: Sama_0758: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
*
Shewanella baltica OS155

Site:
position = -293
score = 5.7025
sequence = ATACGTTT-(0)-AAATGTCC

Gene: Sbal_3368: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
*
Shewanella denitrificans OS217

Site:
position = -176
score = 6.57215
sequence = AGCCATCT-(0)-AGACGTTT

Site:
position = -168
score = 5.77605
sequence = AGACGTTT-(0)-AAACACCC

Gene: Sden_1115: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
*
Shewanella frigidimarina NCIMB 400

Site:
position = -229
score = 6.27268
sequence = GGACGTCT-(0)-ATACGTTT

Site:
position = -221
score = 5.67358
sequence = ATACGTTT-(0)-ATATGTCT

Gene: Sfri_0872: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
*
Shewanella halifaxensis HAW-EB4

Site:
position = -128
score = 6.2892
sequence = GGACGTCT-(0)-ATACGTAT

Site:
position = -120
score = 5.71902
sequence = ATACGTAT-(0)-AAATGTCC

Gene: Shal_3462: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
*
Shewanella loihica PV-4

Site:
position = -97
score = 6.64746
sequence = AGACGTCT-(0)-ATACGTTT

Site:
position = -89
score = 5.52274
sequence = ATACGTTT-(0)-ATACATCC

Gene: Shew_0710: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
*
Shewanella oneidensis MR-1

Site:
position = -119
score = 6.2892
sequence = GGACGTCT-(0)-ATACGTAT

Site:
position = -111
score = 5.71902
sequence = ATACGTAT-(0)-AAATGTCC

Gene: SO1030: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
*
Shewanella pealeana ATCC 700345

Site:
position = -268
score = 6.2892
sequence = GGACGTCT-(0)-ATACGTAT

Site:
position = -260
score = 5.71902
sequence = ATACGTAT-(0)-AAATGTCC

Gene: Spea_3384: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
*
Shewanella piezotolerans WP3

Site:
position = -128
score = 6.2892
sequence = GGACGTCT-(0)-ATACGTAT

Site:
position = -120
score = 5.71902
sequence = ATACGTAT-(0)-AAATGTCC

Gene: swp_0992: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
*
Shewanella putrefaciens CN-32

Site:
position = -144
score = 6.27268
sequence = GGACGTCT-(0)-ATACGTTT

Site:
position = -136
score = 5.7025
sequence = ATACGTTT-(0)-AAATGTCC

Gene: Sputcn32_2965: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
*
Shewanella sediminis HAW-EB3

Site:
position = -54
score = 6.66399
sequence = AGACGTCT-(0)-ATACGTAT

Site:
position = -46
score = 6.07869
sequence = ATACGTAT-(0)-AAACATCT

Gene: Ssed_3739: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
*
Shewanella sp ANA-3

Site:
position = -117
score = 6.2892
sequence = GGACGTCT-(0)-ATACGTAT

Site:
position = -109
score = 5.71902
sequence = ATACGTAT-(0)-AAATGTCC

Gene: Shewana3_3282: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
*
Shewanella sp MR-4

Site:
position = -118
score = 6.2892
sequence = GGACGTCT-(0)-ATACGTAT

Site:
position = -110
score = 5.71902
sequence = ATACGTAT-(0)-AAATGTCC

Gene: Shewmr4_0838: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
*
Shewanella sp MR-7

Site:
position = -118
score = 6.2892
sequence = GGACGTCT-(0)-ATACGTAT

Site:
position = -110
score = 5.71902
sequence = ATACGTAT-(0)-AAATGTCC

Gene: Shewmr7_3184: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
*
Shewanella sp W3-18-1

Site:
position = -144
score = 6.27268
sequence = GGACGTCT-(0)-ATACGTTT

Site:
position = -136
score = 5.7025
sequence = ATACGTTT-(0)-AAATGTCC

Gene: Sputw3181_0982: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
*
Shewanella woodyi ATCC 51908

Site:
position = -163
score = 6.2892
sequence = GGACGTCT-(0)-ATACGTAT

Site:
position = -155
score = 5.82343
sequence = ATACGTAT-(0)-AAACATCC

Gene: Swoo_4088: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
 
CRON 8.
metR
*
Shewanella amazonensis SB2B

Site:
position = -97
score = 6.68341
sequence = AGGCGTCT-(0)-GGACGTCT

Site:
position = -89
score = 6.40434
sequence = GGACGTCT-(0)-AGAAGTTT

Gene: Sama_2628: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella baltica OS155

Site:
position = -97
score = 6.30862
sequence = GGGCGTCT-(0)-GGACGTCT

Site:
position = -89
score = 6.40434
sequence = GGACGTCT-(0)-AGAAGTTT

Gene: Sbal_0666: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella denitrificans OS217

Site:
position = -97
score = 6.68341
sequence = AGGCGTCT-(0)-GGACGTCT

Site:
position = -89
score = 6.40434
sequence = GGACGTCT-(0)-AGAAGTTT

Gene: Sden_0731: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella frigidimarina NCIMB 400

Site:
position = -97
score = 6.68341
sequence = AGGCGTCT-(0)-GGACGTCT

Site:
position = -89
score = 6.40434
sequence = GGACGTCT-(0)-AGAAGTTT

Gene: Sfri_0826: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
 
Shewanella halifaxensis HAW-EB4

Gene: Shal_3283: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella loihica PV-4

Site:
position = -97
score = 6.68341
sequence = AGGCGTCT-(0)-GGACGTCT

Site:
position = -89
score = 6.40434
sequence = GGACGTCT-(0)-AGAAGTTT

Gene: Shew_2987: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella oneidensis MR-1

Site:
position = -97
score = 6.30862
sequence = GGGCGTCT-(0)-GGACGTCT

Site:
position = -89
score = 6.40434
sequence = GGACGTCT-(0)-AGAAGTTT

Gene: SO0817: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella pealeana ATCC 700345

Site:
position = -97
score = 6.30862
sequence = GGGCGTCT-(0)-GGACGTCT

Site:
position = -89
score = 6.40434
sequence = GGACGTCT-(0)-AGAAGTTT

Gene: Spea_3203: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella piezotolerans WP3

Site:
position = -97
score = 6.9749
sequence = AGACTTCT-(0)-AGACGTCC

Site:
position = -89
score = 5.91902
sequence = AGACGTCC-(0)-AGATACCC

Gene: swp_1138: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella putrefaciens CN-32

Site:
position = -97
score = 6.30862
sequence = GGGCGTCT-(0)-GGACGTCT

Site:
position = -89
score = 6.40434
sequence = GGACGTCT-(0)-AGAAGTTT

Gene: Sputcn32_3173: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella sediminis HAW-EB3

Site:
position = -116
score = 5.01195
sequence = ACACATTT-(0)-GGGCGTCT

Site:
position = -108
score = 6.30862
sequence = GGGCGTCT-(0)-GGACGTCT

Site:
position = -100
score = 6.40434
sequence = GGACGTCT-(0)-AGAAGTTT

Gene: Ssed_3556: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella sp ANA-3

Site:
position = -97
score = 6.30862
sequence = GGGCGTCT-(0)-GGACGTCT

Site:
position = -89
score = 6.40434
sequence = GGACGTCT-(0)-AGAAGTTT

Gene: Shewana3_3470: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella sp MR-4

Site:
position = -97
score = 6.30862
sequence = GGGCGTCT-(0)-GGACGTCT

Site:
position = -89
score = 6.40434
sequence = GGACGTCT-(0)-AGAAGTTT

Gene: Shewmr4_3300: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella sp MR-7

Site:
position = -97
score = 6.30862
sequence = GGGCGTCT-(0)-GGACGTCT

Site:
position = -89
score = 6.02956
sequence = GGACGTCT-(0)-GGAAGTTT

Gene: Shewmr7_0653: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella sp W3-18-1

Site:
position = -97
score = 6.30862
sequence = GGGCGTCT-(0)-GGACGTCT

Site:
position = -89
score = 6.40434
sequence = GGACGTCT-(0)-AGAAGTTT

Gene: Sputw3181_0770: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella woodyi ATCC 51908

Site:
position = -108
score = 6.30862
sequence = GGGCGTCT-(0)-GGACGTCT

Site:
position = -100
score = 6.55897
sequence = GGACGTCT-(0)-AGATGTAT

Gene: Swoo_3732: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
 
CRON 9.
metY
 
Shewanella amazonensis SB2B
*
Shewanella baltica OS155

Site:
position = -100
score = 6.62284
sequence = AGACTTCC-(0)-AGATGTCT

Gene: Sbal_0916: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
*
Shewanella denitrificans OS217

Site:
position = -155
score = 6.08128
sequence = GGACATCT-(0)-AGATGGCT

Gene: Sden_0823: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
*
Shewanella frigidimarina NCIMB 400

Site:
position = -75
score = 6.25195
sequence = AGACTTCT-(0)-AGATGGCT

Gene: Sfri_3160: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
*
Shewanella halifaxensis HAW-EB4

Site:
position = -61
score = 5.99669
sequence = AGACTTCT-(0)-AGATGGCC

Gene: Shal_0737: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
*
Shewanella loihica PV-4

Site:
position = -81
score = 6.43634
sequence = AAACATTT-(0)-AGACATCT

Site:
position = -73
score = 6.94412
sequence = AGACATCT-(0)-AGAAGTCT

Gene: Shew_2710: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
*
Shewanella oneidensis MR-1

Site:
position = -215
score = 5.18424
sequence = AGCCATCA-(0)-AAACTTAT

Site:
position = -132
score = 5.74143
sequence = AGACTTCC-(0)-AGATGGCC

Gene: SO1095: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
 
Shewanella pealeana ATCC 700345
*
Shewanella piezotolerans WP3

Site:
position = -71
score = 6.23222
sequence = AAACATTT-(0)-AGACTTCT

Site:
position = -63
score = 6.25195
sequence = AGACTTCT-(0)-AGATGGCT

Gene: swp_4408: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
*
Shewanella putrefaciens CN-32

Site:
position = -110
score = 5.67604
sequence = AAATTTTT-(0)-AGACTTCT

Site:
position = -102
score = 6.8781
sequence = AGACTTCT-(0)-AGATGTCT

Gene: Sputcn32_0932: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
*
Shewanella sediminis HAW-EB3

Site:
position = -69
score = 5.88016
sequence = AAATATTT-(0)-AGACTTCT

Site:
position = -61
score = 6.9749
sequence = AGACTTCT-(0)-AGACGTCC

Gene: Ssed_3283: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
*
Shewanella sp ANA-3

Site:
position = -185
score = 5.67604
sequence = AAATTTTT-(0)-AGACTTCT

Site:
position = -177
score = 6.8781
sequence = AGACTTCT-(0)-AGATGTCT

Gene: Shewana3_0930: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
*
Shewanella sp MR-4

Site:
position = -160
score = 6.23222
sequence = AAACATTT-(0)-AGACTTCT

Site:
position = -152
score = 6.62284
sequence = AGACTTCT-(0)-AGATGTCC

Gene: Shewmr4_0928: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
*
Shewanella sp MR-7

Site:
position = -161
score = 5.74206
sequence = AAAAATTT-(0)-AGACTTCT

Site:
position = -153
score = 6.62284
sequence = AGACTTCT-(0)-AGATGTCC

Gene: Shewmr7_0966: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
*
Shewanella sp W3-18-1

Site:
position = -110
score = 5.53794
sequence = AAAATTTT-(0)-AGACTTCT

Site:
position = -102
score = 6.8781
sequence = AGACTTCT-(0)-AGATGTCT

Gene: Sputw3181_3244: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
*
Shewanella woodyi ATCC 51908

Site:
position = -95
score = 5.11288
sequence = AAACATCC-(0)-AAATGGTT

Site:
position = -61
score = 6.20081
sequence = AGACATCT-(0)-AGATGGCC

Gene: Swoo_3427: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
 
CRON 10.
metK
*
Shewanella amazonensis SB2B

Site:
position = -61
score = 5.40248
sequence = GGCCGTCT-(0)-AGATGTAG

Gene: Sama_2760: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Shewanella baltica OS155

Site:
position = -59
score = 5.77727
sequence = AGCCGTCT-(0)-AGATGTAG

Gene: Sbal_0826: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Shewanella denitrificans OS217

Site:
position = -60
score = 6.22676
sequence = AGACGTCT-(0)-AGATGTAG

Gene: Sden_1082: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Shewanella frigidimarina NCIMB 400

Site:
position = -47
score = 7.28581
sequence = AGACGTCT-(0)-AGACGTAT

Gene: Sfri_0646: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Shewanella halifaxensis HAW-EB4

Site:
position = -60
score = 5.77727
sequence = AGCCGTCT-(0)-AGATGTAG

Site:
position = -52
score = 5.15317
sequence = AGATGTAG-(0)-ATACTTCT

Gene: Shal_0843: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Shewanella loihica PV-4

Site:
position = -61
score = 5.40248
sequence = GGCCGTCT-(0)-AGATGTAG

Site:
position = -53
score = 5.15317
sequence = AGATGTAG-(0)-ATACTTCT

Gene: Shew_0751: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Shewanella oneidensis MR-1

Site:
position = -59
score = 5.77727
sequence = AGCCGTCT-(0)-AGATGTAG

Gene: SO0929: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Shewanella pealeana ATCC 700345

Site:
position = -60
score = 5.77727
sequence = AGCCGTCT-(0)-AGATGTAG

Site:
position = -52
score = 5.15317
sequence = AGATGTAG-(0)-ATACTTCT

Gene: Spea_0787: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Shewanella piezotolerans WP3

Site:
position = -60
score = 5.77727
sequence = AGCCGTCT-(0)-AGATGTAG

Site:
position = -52
score = 5.15317
sequence = AGATGTAG-(0)-ATACTTCT

Gene: swp_4245: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Shewanella putrefaciens CN-32

Site:
position = -59
score = 5.77727
sequence = AGCCGTCT-(0)-AGATGTAG

Gene: Sputcn32_0871: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Shewanella sediminis HAW-EB3

Site:
position = -61
score = 5.40248
sequence = GGCCGTCT-(0)-AGATGTAG

Site:
position = -53
score = 5.15317
sequence = AGATGTAG-(0)-ATACTTCT

Gene: Ssed_0873: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Shewanella sp ANA-3

Site:
position = -59
score = 5.77727
sequence = AGCCGTCT-(0)-AGATGTAG

Gene: Shewana3_3354: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Shewanella sp MR-4

Site:
position = -59
score = 5.77727
sequence = AGCCGTCT-(0)-AGATGTAG

Gene: Shewmr4_0772: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Shewanella sp MR-7

Site:
position = -59
score = 5.77727
sequence = AGCCGTCT-(0)-AGATGTAG

Gene: Shewmr7_3251: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Shewanella sp W3-18-1

Site:
position = -59
score = 5.77727
sequence = AGCCGTCT-(0)-AGATGTAG

Gene: Sputw3181_3302: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Shewanella woodyi ATCC 51908

Site:
position = -145
score = 5.86925
sequence = AGCCGTCT-(0)-AGATGTAA

Site:
position = -137
score = 5.24515
sequence = AGATGTAA-(0)-ATACTTCT

Gene: Swoo_0875: S-adenosylmethionine synthetase (EC 2.5.1.6)
S-adenosylmethionine synthetase (EC 2.5.1.6)
 
CRON 11.
metE
*
Shewanella amazonensis SB2B

Site:
position = -91
score = 6.63725
sequence = AAACTTCT-(0)-AGACGTCC

Site:
position = -83
score = 6.77399
sequence = AGACGTCC-(0)-AGACGCCT

Gene: Sama_2627: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella baltica OS155

Site:
position = -127
score = 6.63725
sequence = AAACTTCT-(0)-AGACGTCC

Site:
position = -119
score = 6.51873
sequence = AGACGTCC-(0)-AGACGCCC

Gene: Sbal_0667: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella denitrificans OS217

Site:
position = -84
score = 6.63725
sequence = AAACTTCT-(0)-AGACGTCC

Site:
position = -76
score = 6.77399
sequence = AGACGTCC-(0)-AGACGCCT

Gene: Sden_0732: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
Shewanella frigidimarina NCIMB 400
 
Shewanella halifaxensis HAW-EB4
*
Shewanella loihica PV-4

Site:
position = -127
score = 6.63725
sequence = AAACTTCT-(0)-AGACGTCC

Site:
position = -119
score = 6.77399
sequence = AGACGTCC-(0)-AGACGCCT

Gene: Shew_2986: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella oneidensis MR-1

Site:
position = -126
score = 6.63725
sequence = AAACTTCT-(0)-AGACGTCC

Site:
position = -118
score = 6.51873
sequence = AGACGTCC-(0)-AGACGCCC

Gene: SO0818: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella pealeana ATCC 700345

Site:
position = -104
score = 6.63725
sequence = AAACTTCT-(0)-AGACGTCC

Site:
position = -96
score = 6.51873
sequence = AGACGTCC-(0)-AGACGCCC

Gene: Spea_3202: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
Shewanella piezotolerans WP3
*
Shewanella putrefaciens CN-32

Site:
position = -127
score = 6.63725
sequence = AAACTTCT-(0)-AGACGTCC

Site:
position = -119
score = 6.51873
sequence = AGACGTCC-(0)-AGACGCCC

Gene: Sputcn32_3172: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella sediminis HAW-EB3

Site:
position = -129
score = 6.63725
sequence = AAACTTCT-(0)-AGACGTCC

Site:
position = -121
score = 6.51873
sequence = AGACGTCC-(0)-AGACGCCC

Gene: Ssed_3555: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella sp ANA-3

Site:
position = -127
score = 6.63725
sequence = AAACTTCT-(0)-AGACGTCC

Site:
position = -119
score = 6.51873
sequence = AGACGTCC-(0)-AGACGCCC

Gene: Shewana3_3469: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella sp MR-4

Site:
position = -126
score = 6.63725
sequence = AAACTTCT-(0)-AGACGTCC

Site:
position = -118
score = 6.51873
sequence = AGACGTCC-(0)-AGACGCCC

Gene: Shewmr4_3299: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella sp MR-7

Site:
position = -127
score = 6.38199
sequence = AAACTTCC-(0)-AGACGTCC

Site:
position = -119
score = 6.51873
sequence = AGACGTCC-(0)-AGACGCCC

Gene: Shewmr7_0654: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella sp W3-18-1

Site:
position = -127
score = 6.63725
sequence = AAACTTCT-(0)-AGACGTCC

Site:
position = -119
score = 6.51873
sequence = AGACGTCC-(0)-AGACGCCC

Gene: Sputw3181_0771: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
Shewanella woodyi ATCC 51908
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
CRON 12.
mmuM
 
Shewanella amazonensis SB2B
*
Shewanella baltica OS155

Site:
position = -159
score = 6.64713
sequence = AGCCATCT-(0)-AAACGTCT

Site:
position = -151
score = 5.95343
sequence = AAACGTCT-(0)-AGATGGTT

Gene: Sbal_3090: Homocysteine S-methyltransferase (EC 2.1.1.10)
 
Shewanella denitrificans OS217
 
Shewanella frigidimarina NCIMB 400
 
Shewanella halifaxensis HAW-EB4
 
Shewanella loihica PV-4
 
Shewanella oneidensis MR-1
 
Shewanella pealeana ATCC 700345
 
Shewanella piezotolerans WP3
*
Shewanella putrefaciens CN-32

Site:
position = -103
score = 6.73714
sequence = AGCCATCT-(0)-AGACATCT

Site:
position = -95
score = 6.66958
sequence = AGACATCT-(0)-AGATGTTT

Gene: Sputcn32_3865: Homocysteine S-methyltransferase (EC 2.1.1.10)
 
Shewanella sediminis HAW-EB3
 
Shewanella sp ANA-3
 
Shewanella sp MR-4
 
Shewanella sp MR-7
*
Shewanella sp W3-18-1

Site:
position = -103
score = 6.39949
sequence = AGCCATCT-(0)-AAACATCT

Site:
position = -95
score = 5.95715
sequence = AAACATCT-(0)-GGATGTTT

Gene: Sputw3181_0088: Homocysteine S-methyltransferase (EC 2.1.1.10)
 
Shewanella woodyi ATCC 51908
Homocysteine S-methyltransferase (EC 2.1.1.10)
mmuP
 
Shewanella amazonensis SB2B
 
Shewanella baltica OS155

Gene: Sbal_3089: S-methylmethionine transporter
 
Shewanella denitrificans OS217
 
Shewanella frigidimarina NCIMB 400
 
Shewanella halifaxensis HAW-EB4
 
Shewanella loihica PV-4
 
Shewanella oneidensis MR-1
 
Shewanella pealeana ATCC 700345
 
Shewanella piezotolerans WP3
 
Shewanella putrefaciens CN-32

Gene: Sputcn32_3864: S-methylmethionine transporter
 
Shewanella sediminis HAW-EB3
 
Shewanella sp ANA-3
 
Shewanella sp MR-4
 
Shewanella sp MR-7
 
Shewanella sp W3-18-1

Gene: Sputw3181_0089: S-methylmethionine transporter
 
Shewanella woodyi ATCC 51908
S-methylmethionine transporter
 
CRON 13.
pcbC
 
Shewanella amazonensis SB2B
*
Shewanella baltica OS155

Site:
position = -126
score = 5.85308
sequence = AGATGTCT-(0)-ATATATCC

Site:
position = -134
score = 5.81224
sequence = GGAAGCCT-(0)-AGATGTCT

Gene: Sbal_0311: putative 2OG-Fe(II) oxygenase
 
Shewanella denitrificans OS217
 
Shewanella frigidimarina NCIMB 400
 
Shewanella halifaxensis HAW-EB4
 
Shewanella loihica PV-4
 
Shewanella oneidensis MR-1
 
Shewanella pealeana ATCC 700345
 
Shewanella piezotolerans WP3
*
Shewanella putrefaciens CN-32

Site:
position = -139
score = 5.4887
sequence = AGATGCCT-(0)-AGATGTGT

Site:
position = -147
score = 5.79091
sequence = AGAAGTAT-(0)-AGATGCCT

Gene: Sputcn32_0728: putative 2OG-Fe(II) oxygenase
 
Shewanella sediminis HAW-EB3
 
Shewanella sp ANA-3
 
Shewanella sp MR-4
 
Shewanella sp MR-7
*
Shewanella sp W3-18-1

Site:
position = -147
score = 5.79091
sequence = AGAAGTAT-(0)-AGATGCCT

Site:
position = -139
score = 5.4887
sequence = AGATGCCT-(0)-AGATGTGT

Gene: Sputw3181_3445: putative 2OG-Fe(II) oxygenase
 
Shewanella woodyi ATCC 51908
putative 2OG-Fe(II) oxygenase
mdeA2
 
Shewanella amazonensis SB2B
 
Shewanella baltica OS155

Gene: Sbal_0312: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella denitrificans OS217
 
Shewanella frigidimarina NCIMB 400
 
Shewanella halifaxensis HAW-EB4
 
Shewanella loihica PV-4
 
Shewanella oneidensis MR-1
 
Shewanella pealeana ATCC 700345
 
Shewanella piezotolerans WP3
 
Shewanella putrefaciens CN-32

Gene: Sputcn32_0729: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella sediminis HAW-EB3
 
Shewanella sp ANA-3
 
Shewanella sp MR-4
 
Shewanella sp MR-7
 
Shewanella sp W3-18-1

Gene: Sputw3181_3444: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella woodyi ATCC 51908
Methionine gamma-lyase (EC 4.4.1.11)
 
CRON 14.
metC
 
Shewanella amazonensis SB2B

Gene: Sama_2008: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella baltica OS155

Gene: Sbal_1838: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella denitrificans OS217

Gene: Sden_2313: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella frigidimarina NCIMB 400

Gene: Sfri_1621: Cystathionine beta-lyase (EC 4.4.1.8)
*
Shewanella halifaxensis HAW-EB4

Site:
position = -10
score = 5.06531
sequence = GGCCGTTT-(0)-AGATGTTA

Site:
position = -2
score = 5.32401
sequence = AGATGTTA-(0)-AGATGGCT

Gene: Shal_1732: Cystathionine beta-lyase (EC 4.4.1.8)
*
Shewanella loihica PV-4

Site:
position = -53
score = 5.45661
sequence = AGCCGTAT-(0)-AGATGTTA

Site:
position = -45
score = 5.32401
sequence = AGATGTTA-(0)-AGATGGCT

Gene: Shew_1789: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella oneidensis MR-1

Gene: SO2191: Cystathionine beta-lyase (EC 4.4.1.8)
*
Shewanella pealeana ATCC 700345

Site:
position = -10
score = 5.44009
sequence = AGCCGTTT-(0)-AGATGTTA

Site:
position = -2
score = 5.32401
sequence = AGATGTTA-(0)-AGATGGCT

Gene: Spea_2520: Cystathionine beta-lyase (EC 4.4.1.8)
*
Shewanella piezotolerans WP3

Site:
position = -61
score = 5.44009
sequence = AGCCGTTT-(0)-AGATGTTA

Site:
position = -53
score = 5.32401
sequence = AGATGTTA-(0)-AGATGGCT

Gene: swp_3096: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella putrefaciens CN-32

Gene: Sputcn32_1736: Cystathionine beta-lyase (EC 4.4.1.8)
*
Shewanella sediminis HAW-EB3

Site:
position = -10
score = 5.44009
sequence = AGCCGTTT-(0)-AGATGTTA

Site:
position = -2
score = 5.32401
sequence = AGATGTTA-(0)-AGATGGCT

Gene: Ssed_2496: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella sp ANA-3

Gene: Shewana3_2414: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella sp MR-4

Gene: Shewmr4_2204: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella sp MR-7

Gene: Shewmr7_2281: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella sp W3-18-1

Gene: Sputw3181_2289: Cystathionine beta-lyase (EC 4.4.1.8)
*
Shewanella woodyi ATCC 51908

Site:
position = -61
score = 5.44009
sequence = AGCCGTTT-(0)-AGATGTTA

Site:
position = -53
score = 5.32401
sequence = AGATGTTA-(0)-AGATGGCT

Gene: Swoo_2120: Cystathionine beta-lyase (EC 4.4.1.8)
Cystathionine beta-lyase (EC 4.4.1.8)
 
CRON 15.
btuB
*
Shewanella amazonensis SB2B

Site:
position = -276
score = 5.78306
sequence = AGACTTTT-(0)-ATACGTTT

Site:
position = -268
score = 6.64746
sequence = ATACGTTT-(0)-AGACGTCT

Gene: Sama_2631: TonB-dependent outer membrane transporter for vitamin B12
*
Shewanella baltica OS155

Site:
position = -445
score = 6.2145
sequence = ATCCGTAT-(0)-AGACGTCT

Gene: Sbal_0663: TonB-dependent outer membrane transporter for vitamin B12
 
Shewanella denitrificans OS217

Gene: Sden_0729: TonB-dependent outer membrane transporter for vitamin B12
 2
Shewanella frigidimarina NCIMB 400

Gene: Sfri_0824: TonB-dependent outer membrane transporter for vitamin B12

Gene: Sfri_0824: TonB-dependent outer membrane transporter for vitamin B12
*
Shewanella halifaxensis HAW-EB4

Site:
position = -453
score = 5.83839
sequence = AGACATTT-(0)-AACCGTAT

Site:
position = -445
score = 6.49867
sequence = AACCGTAT-(0)-AGACGTCT

Gene: Shal_3286: TonB-dependent outer membrane transporter for vitamin B12
*
Shewanella loihica PV-4

Site:
position = -424
score = 6.22367
sequence = ATACGTGT-(0)-AGACGTCT

Site:
position = -432
score = 5.56338
sequence = AGACATTT-(0)-ATACGTGT

Gene: Shew_2990: TonB-dependent outer membrane transporter for vitamin B12
*
Shewanella oneidensis MR-1

Site:
position = -431
score = 6.2145
sequence = ATCCGTAT-(0)-AGACGTCT

Gene: SO0815: TonB-dependent outer membrane transporter for vitamin B12
*
Shewanella pealeana ATCC 700345

Site:
position = -450
score = 6.49867
sequence = AACCGTAT-(0)-AGACGTCT

Site:
position = -458
score = 5.83839
sequence = AGACATTT-(0)-AACCGTAT

Gene: Spea_3206: TonB-dependent outer membrane transporter for vitamin B12
*
Shewanella piezotolerans WP3

Site:
position = -393
score = 6.49867
sequence = AACCGTAT-(0)-AGACGTCT

Site:
position = -401
score = 5.83839
sequence = AGACATTT-(0)-AACCGTAT

Gene: swp_3945: TonB-dependent outer membrane transporter for vitamin B12
*
Shewanella putrefaciens CN-32

Site:
position = -433
score = 6.2145
sequence = ATCCGTAT-(0)-AGACGTCT

Site:
position = -425
score = 5.49202
sequence = AGACGTCT-(0)-ATAATGCT

Gene: Sputcn32_3176: TonB-dependent outer membrane transporter for vitamin B12
*
Shewanella sediminis HAW-EB3

Site:
position = -452
score = 6.0037
sequence = AGACATTT-(0)-ATACGTAT

Site:
position = -444
score = 6.66399
sequence = ATACGTAT-(0)-AGACGTCT

Gene: Ssed_3559: TonB-dependent outer membrane transporter for vitamin B12
*
Shewanella sp ANA-3

Site:
position = -431
score = 6.2145
sequence = ATCCGTAT-(0)-AGACGTCT

Gene: Shewana3_3472: TonB-dependent outer membrane transporter for vitamin B12
*
Shewanella sp MR-4

Site:
position = -431
score = 6.2145
sequence = ATCCGTAT-(0)-AGACGTCT

Gene: Shewmr4_3302: TonB-dependent outer membrane transporter for vitamin B12
*
Shewanella sp MR-7

Site:
position = -434
score = 6.2145
sequence = ATCCGTAT-(0)-AGACGTCT

Gene: Shewmr7_0651: TonB-dependent outer membrane transporter for vitamin B12
*
Shewanella sp W3-18-1

Site:
position = -425
score = 5.49202
sequence = AGACGTCT-(0)-ATAATGCT

Site:
position = -433
score = 6.2145
sequence = ATCCGTAT-(0)-AGACGTCT

Gene: Sputw3181_0767: TonB-dependent outer membrane transporter for vitamin B12
 
Shewanella woodyi ATCC 51908

Gene: Swoo_3735: TonB-dependent outer membrane transporter for vitamin B12
TonB-dependent outer membrane transporter for vitamin B12
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD