Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Cagg_3094 - Chloroflexia

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Creatinine utilization
Effector:
Phylum: Chloroflexi
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 9 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Chloroflexus aggregans DSM 9485 6 1
Chloroflexus sp. Y-400-fl 6 1
Herpetosiphon aurantiacus ATCC 23779
Roseiflexus castenholzii DSM 13941 5 1
Roseiflexus sp. RS-1 3 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
Cagg_3094
*
Chloroflexus aggregans DSM 9485

Site:
position = 6
score = 5.13828
sequence = AAATTGTATACATCAG

Site:
position = -138
score = 5.65348
sequence = ATATTGTATACAATCT

Gene: Cagg_3094: Transcriptional regulator, GntR family
*
Chloroflexus sp. Y-400-fl

Site:
position = 6
score = 5.66026
sequence = AAATTGTATACAACTG

Site:
position = -174
score = 4.92278
sequence = ATGTTGTATACGATCA

Site:
position = -130
score = 5.48813
sequence = ATATTGTATACAATCC

Gene: Chy400_2440: Transcriptional regulator, GntR family
 
Herpetosiphon aurantiacus ATCC 23779
*
Roseiflexus castenholzii DSM 13941

Site:
position = -114
score = 5.65348
sequence = ATATTGTATACAATCT

Site:
position = 12
score = 5.63586
sequence = AAATTGTATACAACAA

Gene: Rcas_3496: Transcriptional regulator, GntR family
*
Roseiflexus sp. RS-1

Site:
position = -189
score = 5.38151
sequence = TATTTGTATACAATCT

Site:
position = -24
score = 5.54086
sequence = GGATTGTATACAATCT

Gene: RoseRS_0051: Transcriptional regulator, GntR family
Transcriptional regulator, GntR family
COG1804
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_3093: Predicted acyl-CoA transferases/carnitine dehydratase
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2439: Predicted acyl-CoA transferases/carnitine dehydratase
 
Herpetosiphon aurantiacus ATCC 23779
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_3495: Predicted acyl-CoA transferases/carnitine dehydratase
 
Roseiflexus sp. RS-1

Gene: RoseRS_0050: Predicted acyl-CoA transferases/carnitine dehydratase
Predicted acyl-CoA transferases/carnitine dehydratase
mvaB
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_3092: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2438: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
 
Herpetosiphon aurantiacus ATCC 23779
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_3494: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0049: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
hyuA
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_3091: N-methylhydantoinase A (EC 3.5.2.14)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2437: N-methylhydantoinase A (EC 3.5.2.14)
 
Herpetosiphon aurantiacus ATCC 23779
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_3493: N-methylhydantoinase A (EC 3.5.2.14)
 
Roseiflexus sp. RS-1
N-methylhydantoinase A (EC 3.5.2.14)
hyuB
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_3090: N-methylhydantoinase B (EC 3.5.2.14)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2436: N-methylhydantoinase B (EC 3.5.2.14)
 
Herpetosiphon aurantiacus ATCC 23779
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_3492: N-methylhydantoinase B (EC 3.5.2.14)
 
Roseiflexus sp. RS-1
N-methylhydantoinase B (EC 3.5.2.14)
chp
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_3089: N-carbamoylsarcosine amidase( EC:3.5.1.59 )
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2435: N-carbamoylsarcosine amidase( EC:3.5.1.59 )
 
Herpetosiphon aurantiacus ATCC 23779
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_3491: N-carbamoylsarcosine amidase( EC:3.5.1.59 )
 
Roseiflexus sp. RS-1

Gene: RoseRS_0048: N-carbamoylsarcosine amidase( EC:3.5.1.59 )
N-carbamoylsarcosine amidase( EC:3.5.1.59 )
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD