Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NrdR - Lactobacillaceae

Properties
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 81 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Lactobacillus acidophilus NCFM 9 4
Lactobacillus brevis ATCC 367 8 5
Lactobacillus casei ATCC 334 11 5
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 8 3
Lactobacillus fermentum IFO 3956 9 3
Lactobacillus helveticus DPC 4571 9 4
Lactobacillus johnsonii NCC 533 5 3
Lactobacillus plantarum WCFS1 8 5
Lactobacillus reuteri JCM 1112 7 4
Lactobacillus rhamnosus GG 11 5
Lactobacillus sakei subsp. sakei 23K 5 3
Lactobacillus salivarius subsp. salivarius UCC118 6 2
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Oenococcus oeni PSU-1
Pediococcus pentosaceus ATCC 25745 8 4
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nrdI
 
Lactobacillus acidophilus NCFM

Gene: LBA1749: Ribonucleotide reduction protein NrdI
 
Lactobacillus brevis ATCC 367
 
Lactobacillus casei ATCC 334
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
*
Lactobacillus fermentum IFO 3956

Site:
position = -30
score = 4.69808
sequence = CCACAACATCTTGTGA

Gene: LAF_1675: Ribonucleotide reduction protein NrdI
 
Lactobacillus helveticus DPC 4571
 
Lactobacillus johnsonii NCC 533

Gene: LJ0592: Ribonucleotide reduction protein NrdI
 
Lactobacillus plantarum WCFS1
 
Lactobacillus reuteri JCM 1112
 
Lactobacillus rhamnosus GG
 
Lactobacillus sakei subsp. sakei 23K
 
Lactobacillus salivarius subsp. salivarius UCC118

Gene: LSL_1231: Ribonucleotide reduction protein NrdI
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_0255: Ribonucleotide reduction protein NrdI
 
Oenococcus oeni PSU-1
 
Pediococcus pentosaceus ATCC 25745
Ribonucleotide reduction protein NrdI
nrdE
 
Lactobacillus acidophilus NCFM
 
Lactobacillus brevis ATCC 367

Gene: LVIS_0596: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Lactobacillus casei ATCC 334

Gene: LSEI_1468: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
 2
Lactobacillus fermentum IFO 3956

Gene: LAF_0280: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)

Gene: LAF_1674: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Lactobacillus helveticus DPC 4571
 
Lactobacillus johnsonii NCC 533
 
Lactobacillus plantarum WCFS1

Gene: lp_0693: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Lactobacillus reuteri JCM 1112

Gene: LAR_0312: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Lactobacillus rhamnosus GG

Gene: LGG_01474: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Lactobacillus sakei subsp. sakei 23K

Gene: LSA0941: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Lactobacillus salivarius subsp. salivarius UCC118

Gene: LSL_1232: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_0254: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Oenococcus oeni PSU-1

Gene: OEOE_0140: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Pediococcus pentosaceus ATCC 25745

Gene: PEPE_1488: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
nrdF
 
Lactobacillus acidophilus NCFM

Gene: LBA1750: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Lactobacillus brevis ATCC 367

Gene: LVIS_0595: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Lactobacillus casei ATCC 334

Gene: LSEI_1469: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
 3
Lactobacillus fermentum IFO 3956

Gene: LAF_0279: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)

Gene: LAF_1673: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)

Gene: LAF_1672: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Lactobacillus helveticus DPC 4571
 
Lactobacillus johnsonii NCC 533

Gene: LJ0591: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Lactobacillus plantarum WCFS1

Gene: lp_0692: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Lactobacillus reuteri JCM 1112

Gene: LAR_0311: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Lactobacillus rhamnosus GG

Gene: LGG_01475: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Lactobacillus sakei subsp. sakei 23K

Gene: LSA0940: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Lactobacillus salivarius subsp. salivarius UCC118

Gene: LSL_1233: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_0256: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Oenococcus oeni PSU-1

Gene: OEOE_0141: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Pediococcus pentosaceus ATCC 25745

Gene: PEPE_1489: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
nrdH
 
Lactobacillus acidophilus NCFM
*
Lactobacillus brevis ATCC 367

Site:
position = -94
score = 4.57309
sequence = CTACCAAATATGGTGT

Site:
position = -126
score = 4.48345
sequence = ACACCATATTTGGTAG

Gene: LVIS_0597: Glutaredoxin-like protein NrdH
*
Lactobacillus casei ATCC 334

Site:
position = -85
score = 4.58184
sequence = CCCCAAGATATGGTAT

Gene: LSEI_1467: Glutaredoxin-like protein NrdH
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
*
Lactobacillus fermentum IFO 3956

Site:
position = -109
score = 5.42504
sequence = CCACCATATCTTGTGT

Site:
position = -78
score = 4.40774
sequence = GCACGAGATATGGTGG

Gene: LAF_0281: Glutaredoxin-like protein NrdH
 
Lactobacillus helveticus DPC 4571
 
Lactobacillus johnsonii NCC 533
*
Lactobacillus plantarum WCFS1

Site:
position = -86
score = 4.64879
sequence = ACCCTAGATGTTGTGT

Site:
position = -54
score = 4.67018
sequence = TCACCACATGTTGTAT

Gene: lp_0694: Glutaredoxin-like protein NrdH
*
Lactobacillus reuteri JCM 1112

Site:
position = -115
score = 5.58782
sequence = GTACTATATATTGTGT

Gene: LAR_0313: Glutaredoxin-like protein NrdH
*
Lactobacillus rhamnosus GG

Site:
position = -85
score = 4.60327
sequence = CCCCAAGATATGGTGT

Gene: LGG_01473: Glutaredoxin-like protein NrdH
*
Lactobacillus sakei subsp. sakei 23K

Site:
position = -89
score = 4.95512
sequence = CTACCATATCTGGTAT

Gene: LSA0942: Glutaredoxin-like protein NrdH
*
Lactobacillus salivarius subsp. salivarius UCC118

Site:
position = -84
score = 5.52267
sequence = CCACAATATATGGTGT

Site:
position = -51
score = 4.89121
sequence = TCTCTATATATTGTAT

Gene: LSL_1230: Glutaredoxin-like protein NrdH
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_0253: Glutaredoxin-like protein NrdH
 
Oenococcus oeni PSU-1

Gene: OEOE_0139: Glutaredoxin-like protein NrdH
*
Pediococcus pentosaceus ATCC 25745

Site:
position = -122
score = 5.26303
sequence = GCACAATATATAGTGG

Gene: PEPE_1487: Glutaredoxin-like protein NrdH
Glutaredoxin-like protein NrdH
 
CRON 2.
pnuN
*
Lactobacillus acidophilus NCFM

Site:
position = -53
score = 5.46652
sequence = GCACAATATATAGTAT

Gene: LBA1653: NrdR-regulated deoxyribonucleotide transporter, PnuC-like
*
Lactobacillus brevis ATCC 367

Site:
position = -41
score = 3.49626
sequence = GTACTAAATATAGAAA

Site:
position = -82
score = 5.82932
sequence = CCACAATATATTGTGT

Gene: LVIS_0311: NrdR-regulated deoxyribonucleotide transporter, PnuC-like
*
Lactobacillus casei ATCC 334

Site:
position = -105
score = 3.58663
sequence = CCAATATATTGTATAT

Site:
position = -107
score = 4.85659
sequence = CACCAATATATTGTAT

Gene: LSEI_1204: NrdR-regulated deoxyribonucleotide transporter, PnuC-like
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
 
Lactobacillus fermentum IFO 3956

Gene: LAF_1803: NrdR-regulated deoxyribonucleotide transporter, PnuC-like
*
Lactobacillus helveticus DPC 4571

Site:
position = -172
score = 3.69038
sequence = ACACAACATATAGATA

Site:
position = -140
score = 4.46445
sequence = GCACAATATTTTGTAA

Site:
position = -50
score = 4.90158
sequence = ACACAAAATGTTGTAT

Gene: lhv_1757: NrdR-regulated deoxyribonucleotide transporter, PnuC-like
*
Lactobacillus johnsonii NCC 533

Site:
position = -46
score = 5.68414
sequence = GCACAATATATTGTGT

Gene: LJ0643: NrdR-regulated deoxyribonucleotide transporter, PnuC-like
*
Lactobacillus plantarum WCFS1

Site:
position = -108
score = 5.68748
sequence = ATACAATATATTGTGT

Site:
position = -78
score = 4.80409
sequence = ACACTACATGTAGTAG

Gene: lp_0259: NrdR-regulated deoxyribonucleotide transporter, PnuC-like
*
Lactobacillus reuteri JCM 1112

Site:
position = -72
score = 5.63313
sequence = CCACAATATCTTGTGT

Site:
position = -30
score = 4.92004
sequence = GCACAACATATAGTAG

Gene: LAR_1670: NrdR-regulated deoxyribonucleotide transporter, PnuC-like
*
Lactobacillus rhamnosus GG

Site:
position = -107
score = 4.85659
sequence = CACCAATATATTGTAT

Site:
position = -139
score = 3.91768
sequence = TTAGTACATGTTGTGG

Gene: LGG_01221: NrdR-regulated deoxyribonucleotide transporter, PnuC-like
*
Lactobacillus sakei subsp. sakei 23K

Site:
position = -155
score = 4.21242
sequence = CTACCATATTTTGAAT

Site:
position = -105
score = 5.39164
sequence = GTACTATATATAGTGT

Gene: LSA1189: NrdR-regulated deoxyribonucleotide transporter, PnuC-like
 
Lactobacillus salivarius subsp. salivarius UCC118
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_1445: NrdR-regulated deoxyribonucleotide transporter, PnuC-like
 
Oenococcus oeni PSU-1

Gene: OEOE_1395: NrdR-regulated deoxyribonucleotide transporter, PnuC-like
 
Pediococcus pentosaceus ATCC 25745

Gene: PEPE_0058: NrdR-regulated deoxyribonucleotide transporter, PnuC-like
NrdR-regulated deoxyribonucleotide transporter, PnuC-like
dgk2
 
Lactobacillus acidophilus NCFM

Gene: LBA1950: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
*
Lactobacillus brevis ATCC 367

Site:
position = -41
score = 3.636
sequence = GTACACTATATCTTGT

Site:
position = -39
score = 5.65721
sequence = ACACTATATCTTGTAT

Gene: LVIS_1520: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
 
Lactobacillus casei ATCC 334

Gene: LSEI_1205: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Gene: LBUL_2018: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
 
Lactobacillus fermentum IFO 3956

Gene: LAF_1345: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
 
Lactobacillus helveticus DPC 4571

Gene: lhv_2080: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
 
Lactobacillus johnsonii NCC 533

Gene: LJ1825: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
*
Lactobacillus plantarum WCFS1

Site:
position = -72
score = 3.93469
sequence = AAAGTCTATATGGTAT

Site:
position = -40
score = 5.07398
sequence = ATACAATATATTGTGC

Gene: lp_1329: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
*
Lactobacillus reuteri JCM 1112

Site:
position = -88
score = 4.38663
sequence = CCACCAAATATTGTAA

Site:
position = -56
score = 4.99819
sequence = CCACAATATTTTGTAG

Gene: LAR_1221: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
 
Lactobacillus rhamnosus GG

Gene: LGG_01222: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
 
Lactobacillus sakei subsp. sakei 23K
 
Lactobacillus salivarius subsp. salivarius UCC118
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_0617: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
 
Oenococcus oeni PSU-1

Gene: OEOE_0849: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
*
Pediococcus pentosaceus ATCC 25745

Site:
position = -83
score = 5.1559
sequence = ATACAATATGTTGTGG

Gene: PEPE_0650: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
dgk1
*
Lactobacillus acidophilus NCFM

Site:
position = -53
score = 4.02826
sequence = CTACCAGATATTGACT

Site:
position = -23
score = 4.66104
sequence = ACCCTATATATGGTAG

Gene: LBA1949: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
*
Lactobacillus brevis ATCC 367

Site:
position = -100
score = 4.81139
sequence = CCACGATATATTGTCT

Site:
position = -68
score = 4.92902
sequence = GTACAATATGTGGTGT

Gene: LVIS_1711: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
 
Lactobacillus casei ATCC 334
*
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Site:
position = -34
score = 3.59034
sequence = AACGTAGATCTAGTAT

Site:
position = -64
score = 4.23776
sequence = GCACTATATCTTGCAA

Gene: LBUL_2017: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
 
Lactobacillus fermentum IFO 3956

Gene: LAF_1535: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
*
Lactobacillus helveticus DPC 4571

Site:
position = -28
score = 5.02694
sequence = CCACAATATCTCGTAT

Site:
position = -45
score = 3.76244
sequence = AAAAAAGAGCTTGTGT

Site:
position = 2
score = 4.35726
sequence = GTCCAATATCTGGTAT

Gene: lhv_2079: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
*
Lactobacillus johnsonii NCC 533

Site:
position = -56
score = 4.53855
sequence = CTACCAGATATTGAAT

Site:
position = -26
score = 5.33795
sequence = AAACTATATATTGTAG

Gene: LJ1824: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
*
Lactobacillus plantarum WCFS1

Site:
position = -99
score = 4.37897
sequence = TCACCAGATATTGCAT

Site:
position = -67
score = 5.03948
sequence = GTACAATATGTAGTGT

Gene: lp_1011: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
 
Lactobacillus reuteri JCM 1112

Gene: LAR_1408: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
 
Lactobacillus rhamnosus GG
 
Lactobacillus sakei subsp. sakei 23K
 
Lactobacillus salivarius subsp. salivarius UCC118
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_0293: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
 
Oenococcus oeni PSU-1

Gene: OEOE_0437: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
*
Pediococcus pentosaceus ATCC 25745

Site:
position = -77
score = 4.11974
sequence = TTTCAAGATATTGTTT

Site:
position = -46
score = 4.42598
sequence = GTACAATATGTAGTGC

Gene: PEPE_1437: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
 
CRON 3.
mntH2
 
Lactobacillus acidophilus NCFM
 
Lactobacillus brevis ATCC 367
 
Lactobacillus casei ATCC 334
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
 
Lactobacillus fermentum IFO 3956
 
Lactobacillus helveticus DPC 4571
 
Lactobacillus johnsonii NCC 533
 
Lactobacillus plantarum WCFS1
 
Lactobacillus reuteri JCM 1112
 
Lactobacillus rhamnosus GG
 
Lactobacillus sakei subsp. sakei 23K
 
Lactobacillus salivarius subsp. salivarius UCC118
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
 
Oenococcus oeni PSU-1

Gene: OEOE_0827: Predicted manganese transport protein
*
Pediococcus pentosaceus ATCC 25745

Site:
position = -133
score = 5.71156
sequence = ATACTATATATTGTAT

Gene: PEPE_0483: Predicted manganese transport protein
Predicted manganese transport protein
nrdD
*
Lactobacillus acidophilus NCFM

Site:
position = -58
score = 4.50871
sequence = ATACAAGATGTTGTGC

Gene: LBA0160: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
 
Lactobacillus brevis ATCC 367
*
Lactobacillus casei ATCC 334

Site:
position = -131
score = 5.49294
sequence = ACACTATATAGTGTAT

Site:
position = -133
score = 4.97235
sequence = ACACACTATATAGTGT

Gene: LSEI_0131: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Site:
position = -173
score = 5.30505
sequence = CCACAATATCTGGTAT

Site:
position = -131
score = 4.55242
sequence = AAACAAGATGTAGTGG

Gene: LBUL_0185: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Lactobacillus fermentum IFO 3956

Site:
position = -99
score = 4.73957
sequence = CCACAAGATCTTGTAA

Site:
position = -68
score = 5.27768
sequence = AAACTATATGTTGTGT

Gene: LAF_1376: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Lactobacillus helveticus DPC 4571

Site:
position = -56
score = 5.10078
sequence = ATACAAGATGTTGTAT

Gene: lhv_0169: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Lactobacillus johnsonii NCC 533

Site:
position = -63
score = 4.60636
sequence = CTACAATATCATGTAG

Gene: LJ0137: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Lactobacillus plantarum WCFS1

Site:
position = -49
score = 4.38667
sequence = GCACTATCAATTGTAT

Site:
position = -80
score = 5.51537
sequence = CTACTATATATAGTAT

Gene: lp_2932: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Lactobacillus reuteri JCM 1112

Site:
position = -92
score = 5.31159
sequence = CCACAACATATAGTGT

Gene: LAR_1249: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Lactobacillus rhamnosus GG

Site:
position = -131
score = 5.49294
sequence = CCACTATATAGTGTAT

Gene: LGG_00138: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Lactobacillus sakei subsp. sakei 23K

Site:
position = -75
score = 5.10679
sequence = ACACTATATATAGTTG

Gene: LSA1459: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Lactobacillus salivarius subsp. salivarius UCC118

Site:
position = -108
score = 5.53681
sequence = ATACTATATATAGTGT

Site:
position = -76
score = 5.8534
sequence = ACACTATATATTGTAT

Gene: LSL_1332: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_1539: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
 
Oenococcus oeni PSU-1

Gene: OEOE_1116: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
 
Pediococcus pentosaceus ATCC 25745

Gene: PEPE_0484: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdG
 
Lactobacillus acidophilus NCFM

Gene: LBA0161: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Lactobacillus brevis ATCC 367
*
Lactobacillus casei ATCC 334

Site:
position = -113
score = 4.32955
sequence = ATACTACATCTTGGGG

Gene: LSEI_1742: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Gene: LBUL_0186: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Lactobacillus fermentum IFO 3956

Gene: LAF_1375: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Lactobacillus helveticus DPC 4571

Gene: lhv_0170: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Lactobacillus johnsonii NCC 533

Gene: LJ0138: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Lactobacillus plantarum WCFS1

Gene: lp_2931: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Lactobacillus reuteri JCM 1112

Gene: LAR_1248: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
*
Lactobacillus rhamnosus GG

Site:
position = -145
score = 4.96889
sequence = ATACTACATCTTGTAG

Gene: LGG_01800: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Lactobacillus sakei subsp. sakei 23K

Gene: LSA1458: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Lactobacillus salivarius subsp. salivarius UCC118

Gene: LSL_1331: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_1538: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Oenococcus oeni PSU-1

Gene: OEOE_1115: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Pediococcus pentosaceus ATCC 25745

Gene: PEPE_0485: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
CRON 4.
nrdJ
*
Lactobacillus acidophilus NCFM

Site:
position = -52
score = 3.45133
sequence = ATCATACATAATGTGT

Site:
position = -83
score = 5.05875
sequence = GTACAAGATATTGTGG

Gene: LBA0041: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
*
Lactobacillus brevis ATCC 367

Site:
position = -45
score = 4.60099
sequence = CTACCATATATAGCAT

Site:
position = -77
score = 5.26147
sequence = TAACTATATATTGTAT

Gene: LVIS_1898: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
*
Lactobacillus casei ATCC 334

Site:
position = -31
score = 5.26176
sequence = ATACCATATCTTGTAT

Gene: LSEI_2287: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
*
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Site:
position = -138
score = 3.72682
sequence = ACACAGTTTCTCGTGT

Site:
position = -107
score = 5.3571
sequence = ACACTACATCTTGTGT

Gene: LBUL_0079: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
 
Lactobacillus fermentum IFO 3956
*
Lactobacillus helveticus DPC 4571

Site:
position = -85
score = 5.34576
sequence = CCACAAGATATTGTGG

Gene: lhv_0042: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
 
Lactobacillus johnsonii NCC 533
 
Lactobacillus plantarum WCFS1
 
Lactobacillus reuteri JCM 1112
*
Lactobacillus rhamnosus GG

Site:
position = -31
score = 5.26176
sequence = ATACCATATCTTGTAT

Gene: LGG_02296: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
 
Lactobacillus sakei subsp. sakei 23K
 
Lactobacillus salivarius subsp. salivarius UCC118
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
 
Oenococcus oeni PSU-1
 
Pediococcus pentosaceus ATCC 25745
Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
cbrX
 
Lactobacillus acidophilus NCFM

Gene: LBA0040: Additional lipoprotein component of predicted cobalamin ECF transporter
 
Lactobacillus brevis ATCC 367
 
Lactobacillus casei ATCC 334

Gene: LSEI_2286: Additional lipoprotein component of predicted cobalamin ECF transporter
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Gene: LBUL_0080: Additional lipoprotein component of predicted cobalamin ECF transporter
 
Lactobacillus fermentum IFO 3956
 
Lactobacillus helveticus DPC 4571

Gene: lhv_0041: Additional lipoprotein component of predicted cobalamin ECF transporter
 
Lactobacillus johnsonii NCC 533
 
Lactobacillus plantarum WCFS1
 
Lactobacillus reuteri JCM 1112

Gene: LAR_1582: Additional lipoprotein component of predicted cobalamin ECF transporter
 
Lactobacillus rhamnosus GG

Gene: LGG_02295: Additional lipoprotein component of predicted cobalamin ECF transporter
 
Lactobacillus sakei subsp. sakei 23K
 
Lactobacillus salivarius subsp. salivarius UCC118
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
 
Oenococcus oeni PSU-1
 
Pediococcus pentosaceus ATCC 25745
Additional lipoprotein component of predicted cobalamin ECF transporter
cbrT
 
Lactobacillus acidophilus NCFM

Gene: LBA0039: Substrate-specific component CbrT of predicted cobalamin ECF transporter
 
Lactobacillus brevis ATCC 367
 
Lactobacillus casei ATCC 334

Gene: LSEI_2285: Substrate-specific component CbrT of predicted cobalamin ECF transporter
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Gene: LBUL_0081: Substrate-specific component CbrT of predicted cobalamin ECF transporter
 
Lactobacillus fermentum IFO 3956
 
Lactobacillus helveticus DPC 4571

Gene: lhv_0040: Substrate-specific component CbrT of predicted cobalamin ECF transporter
 
Lactobacillus johnsonii NCC 533
 
Lactobacillus plantarum WCFS1
 
Lactobacillus reuteri JCM 1112

Gene: LAR_1581: Substrate-specific component CbrT of predicted cobalamin ECF transporter
 
Lactobacillus rhamnosus GG

Gene: LGG_02294: Substrate-specific component CbrT of predicted cobalamin ECF transporter
 
Lactobacillus sakei subsp. sakei 23K
 
Lactobacillus salivarius subsp. salivarius UCC118
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
 
Oenococcus oeni PSU-1
 
Pediococcus pentosaceus ATCC 25745
Substrate-specific component CbrT of predicted cobalamin ECF transporter
pduO
 
Lactobacillus acidophilus NCFM

Gene: LBA0038: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Lactobacillus brevis ATCC 367

Gene: LVIS_1897: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Lactobacillus casei ATCC 334

Gene: LSEI_2284: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Gene: LBUL_0082: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Lactobacillus fermentum IFO 3956
 
Lactobacillus helveticus DPC 4571

Gene: lhv_0039: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Lactobacillus johnsonii NCC 533
 
Lactobacillus plantarum WCFS1
 
Lactobacillus reuteri JCM 1112

Gene: LAR_1613: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Lactobacillus rhamnosus GG

Gene: LGG_02293: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Lactobacillus sakei subsp. sakei 23K
 
Lactobacillus salivarius subsp. salivarius UCC118
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
 
Oenococcus oeni PSU-1
 
Pediococcus pentosaceus ATCC 25745
Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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