Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog RcnR - Enterobacteriales

Properties
Regulator type: Transcription factor
Regulator family: CsoR
Regulation mode: repressor
Biological process: Cobalt resistance; Nickel resistance
Effector: Nickel ion, (Ni2+); Cobalt ion, (Co2+)
Phylum: Gammaproteobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 16 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Citrobacter koseri ATCC BAA-895 2 2
Edwardsiella tarda EIB202
Enterobacter sp. 638
Erwinia amylovora ATCC 49946
Erwinia carotovora subsp. atroseptica SCRI1043
Escherichia coli str. K-12 substr. MG1655 2 2
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 2 2
Photorhabdus luminescens subsp. laumondii TTO1
Proteus mirabilis HI4320
Salmonella typhimurium LT2 2 2
Serratia proteamaculans 568
Yersinia pestis KIM
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rcnR
*
Citrobacter koseri ATCC BAA-895

Site:
position = -64
score = 5.22404
sequence = TACTACCCCCCAGTA

Site:
position = -84
score = 5.39716
sequence = TACTCCCCCCCAGTA

Gene: CKO_04229: Cobalt and nickel resistance transcriptional regulator RcnR
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -83
score = 5.39716
sequence = TACTCCCCCCCAGTA

Site:
position = -63
score = 5.22404
sequence = TACTACCCCCCAGTA

Gene: b2105: Cobalt and nickel resistance transcriptional regulator RcnR
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -40
score = 5.22404
sequence = TACTACCCCCCAGTA

Site:
position = -61
score = 5.39716
sequence = TACTCCCCCCCAGTA

Gene: KPN_00424: Cobalt and nickel resistance transcriptional regulator RcnR
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
*
Salmonella typhimurium LT2

Site:
position = -64
score = 5.22404
sequence = TACTACCCCCCAGTA

Site:
position = -84
score = 5.39716
sequence = TACTCCCCCCCAGTA

Gene: STM3023: Cobalt and nickel resistance transcriptional regulator RcnR
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
Cobalt and nickel resistance transcriptional regulator RcnR
 
CRON 2.
rcnA
*
Citrobacter koseri ATCC BAA-895

Site:
position = 22
score = 5.22404
sequence = TACTGGGGGGTAGTA

Site:
position = 42
score = 5.39716
sequence = TACTGGGGGGGAGTA

Gene: CKO_04230: Nickel/cobalt efflux transporter RcnA
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -72
score = 5.22404
sequence = TACTGGGGGGTAGTA

Site:
position = -52
score = 5.39716
sequence = TACTGGGGGGGAGTA

Gene: b2106: Nickel/cobalt efflux transporter RcnA
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -67
score = 5.22404
sequence = TACTGGGGGGTAGTA

Site:
position = -46
score = 5.39716
sequence = TACTGGGGGGGAGTA

Gene: KPN_00423: Nickel/cobalt efflux transporter RcnA
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
*
Salmonella typhimurium LT2

Site:
position = -72
score = 5.22404
sequence = TACTGGGGGGTAGTA

Site:
position = -52
score = 5.39716
sequence = TACTGGGGGGGAGTA

Gene: STM3024: Nickel/cobalt efflux transporter RcnA
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
Nickel/cobalt efflux transporter RcnA
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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