Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Cg3239 - Corynebacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: repressor
Biological process: Metabolite transport
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Corynebacterium amycolatum SK46
Corynebacterium aurimucosum ATCC 700975 2 2
Corynebacterium diphtheriae NCTC 13129
Corynebacterium efficiens YS-314 2 2
Corynebacterium glutamicum ATCC 13032 2 2
Corynebacterium jeikeium K411 2 2
Corynebacterium kroppenstedtii DSM 44385
Corynebacterium urealyticum DSM 7109
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
cg3239
 
Corynebacterium amycolatum SK46
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -13
score = 4.426
sequence = ATGCGAGGTGTGCAT

Gene: cauri_2410: Predicted transcriptional regulator Cg3239, LysR family
 
Corynebacterium diphtheriae NCTC 13129
*
Corynebacterium efficiens YS-314

Site:
position = -131
score = 4.74949
sequence = ATGCGTTTTCTGCAT

Gene: CE2767: Predicted transcriptional regulator Cg3239, LysR family
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -28
score = 5.14185
sequence = ATTCACTTTGTGCAT

Gene: cg3239: Predicted transcriptional regulator Cg3239, LysR family
*
Corynebacterium jeikeium K411

Site:
position = -95
score = 4.69251
sequence = ATTCACTAAATGCAA

Gene: jk0144: Predicted transcriptional regulator Cg3239, LysR family
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Predicted transcriptional regulator Cg3239, LysR family
 
CRON 2.
cg3240
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_1836: Predicted permease
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -72
score = 4.426
sequence = ATGCACACCTCGCAT

Gene: cauri_2411: Predicted permease
 
Corynebacterium diphtheriae NCTC 13129
*
Corynebacterium efficiens YS-314

Site:
position = -72
score = 4.74949
sequence = ATGCAGAAAACGCAT

Gene: CE2769: Predicted permease
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -61
score = 5.14185
sequence = ATGCACAAAGTGAAT

Gene: cg3240: Predicted permease
*
Corynebacterium jeikeium K411

Site:
position = -102
score = 4.69251
sequence = TTGCATTTAGTGAAT

Gene: jk0143: Predicted permease
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0109: Predicted permease
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0163: Predicted permease
Predicted permease
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD