Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DVU3023 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process: Lactate utilization
Effector: Lactate
Phylum: Proteobacteria/delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 26 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfohalobium retbaense DSM 5692 9 1
Desulfomicrobium baculatum DSM 4028 6 1
Desulfovibrio desulfuricans G20 9 1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1 8 1
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638
Desulfovibrio vulgaris Hildenborough 11 3
Desulfovibrio vulgaris str. Miyazaki F 10 2
Lawsonia intracellularis PHE/MN1-00
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
por
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_1036: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -189
score = 5.1131
sequence = TGTCTTTTTTTTCAGACA

Site:
position = -323
score = 4.21094
sequence = TGTCCGGAAAAATGGACG

Site:
position = -460
score = 5.15134
sequence = TGTCCGGAAAATCGGACG

Gene: Dbac_1044: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
*
Desulfovibrio desulfuricans G20

Site:
position = -388
score = 5.43203
sequence = TGTCCTGTTTTTCAGACA

Site:
position = -363
score = 5.57214
sequence = AGTCCGCTTTTTCAGACA

Site:
position = -262
score = 5.33811
sequence = TGTCCTTTTTTTCAGACA

Site:
position = -243
score = 4.40343
sequence = TGTACGATCCTCCGGACA

Gene: Dde_3237: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0298: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
*
Desulfovibrio magneticus RS-1

Site:
position = -442
score = 4.96822
sequence = AGTCCCCTTTTCCAGACT

Site:
position = -279
score = 4.7749
sequence = AGTCTGAAAAACCAGACT

Site:
position = -252
score = 4.89863
sequence = TGTCTGAAAAACCAGACT

Site:
position = -172
score = 4.38252
sequence = CATCCGATTTCCCGGATG

Gene: DMR_20070: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02167: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Desulfovibrio salexigens DSM 2638
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -351
score = 5.20575
sequence = CGTCCACTTTTTCAGACA

Site:
position = -390
score = 5.20549
sequence = CATCCGCTTTTTCAGACA

Site:
position = -251
score = 5.06502
sequence = AGTCCGCTTTTCAAGACA

Gene: DVU3025: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -631
score = 4.38582
sequence = TGTCCTACCTTTCGGACG

Site:
position = -592
score = 5.09806
sequence = CATCCGTTTTTTCGGACA

Site:
position = -467
score = 5.05253
sequence = CGTCCGGATTTTCGGACC

Gene: DvMF_1860: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
 
Lawsonia intracellularis PHE/MN1-00

Gene: LI0278: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
lldP
*
Desulfohalobium retbaense DSM 5692

Site:
position = -174
score = 4.86701
sequence = TGTCCGCTATCCAGGACA

Site:
position = -362
score = 4.39504
sequence = AGGCCCAATTCCCAGACA

Site:
position = -532
score = 4.40291
sequence = TGTCTGAACTCCAGGACA

Gene: Dret_1039: L-lactate permease
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1045: L-lactate permease
 
Desulfovibrio desulfuricans G20

Gene: Dde_3238: L-lactate permease
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_2169: L-lactate permease
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2573: L-lactate permease
*2
Desulfovibrio vulgaris Hildenborough

Gene: DVU3026: L-lactate permease

Site:
position = -311
score = 4.91797
sequence = TGTCTGCAATGTCGGACA

Site:
position = -402
score = 5.01886
sequence = AGTCCATTTTTTCAGACT

Gene: DVU2451: L-lactate permease
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1861: L-lactate permease
 
Lawsonia intracellularis PHE/MN1-00
L-lactate permease
glcD
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_1038: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1046: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
 
Desulfovibrio desulfuricans G20

Gene: Dde_3239: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1994: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
 
Desulfovibrio magneticus RS-1

Gene: DMR_20060: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02393: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2572: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU3027: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1862: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
 
Lawsonia intracellularis PHE/MN1-00
Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
glcF
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_1037: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1047: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
 
Desulfovibrio desulfuricans G20

Gene: Dde_3240: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1993: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
 
Desulfovibrio magneticus RS-1

Gene: DMR_20050: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02394: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2571: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU3028: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1863: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
 
Lawsonia intracellularis PHE/MN1-00
Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
pta
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_1035: Phosphate acetyltransferase (EC 2.3.1.8)
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1048: Phosphate acetyltransferase (EC 2.3.1.8)
 
Desulfovibrio desulfuricans G20

Gene: Dde_3241: Phosphate acetyltransferase (EC 2.3.1.8)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0297: Phosphate acetyltransferase (EC 2.3.1.8)
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02164: Phosphate acetyltransferase (EC 2.3.1.8)
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2570: Phosphate acetyltransferase (EC 2.3.1.8)
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU3029: Phosphate acetyltransferase (EC 2.3.1.8)
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1864: Phosphate acetyltransferase (EC 2.3.1.8)
 
Lawsonia intracellularis PHE/MN1-00

Gene: LI0279: Phosphate acetyltransferase (EC 2.3.1.8)
Phosphate acetyltransferase (EC 2.3.1.8)
ackA
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_1034: Acetate kinase (EC 2.7.2.1)
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1049: Acetate kinase (EC 2.7.2.1)
 
Desulfovibrio desulfuricans G20

Gene: Dde_3242: Acetate kinase (EC 2.7.2.1)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0296: Acetate kinase (EC 2.7.2.1)
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02163: Acetate kinase (EC 2.7.2.1)
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2569: Acetate kinase (EC 2.7.2.1)
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU3030: Acetate kinase (EC 2.7.2.1)
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1865: Acetate kinase (EC 2.7.2.1)
 
Lawsonia intracellularis PHE/MN1-00

Gene: LI0280: Acetate kinase (EC 2.7.2.1)
Acetate kinase (EC 2.7.2.1)
DVU3031
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_1033: BioD-like N-terminal domain of phosphotransacetylase
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20

Gene: Dde_3243: BioD-like N-terminal domain of phosphotransacetylase
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_20030: BioD-like N-terminal domain of phosphotransacetylase
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_3044: BioD-like N-terminal domain of phosphotransacetylase
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU3031: BioD-like N-terminal domain of phosphotransacetylase
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1866: BioD-like N-terminal domain of phosphotransacetylase
 
Lawsonia intracellularis PHE/MN1-00
BioD-like N-terminal domain of phosphotransacetylase
lldG
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_1032: L-lactate dehydrogenase, hypothetical protein subunit LldG
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1728: L-lactate dehydrogenase, hypothetical protein subunit LldG
 
Desulfovibrio desulfuricans G20

Gene: Dde_3244: L-lactate dehydrogenase, hypothetical protein subunit LldG
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1992: L-lactate dehydrogenase, hypothetical protein subunit LldG
 
Desulfovibrio magneticus RS-1

Gene: DMR_20010: L-lactate dehydrogenase, hypothetical protein subunit LldG
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02395: L-lactate dehydrogenase, hypothetical protein subunit LldG
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2568: L-lactate dehydrogenase, hypothetical protein subunit LldG
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU3032: L-lactate dehydrogenase, hypothetical protein subunit LldG
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1867: L-lactate dehydrogenase, hypothetical protein subunit LldG
 
Lawsonia intracellularis PHE/MN1-00
L-lactate dehydrogenase, hypothetical protein subunit LldG
lldEF
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_1031: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1729: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Desulfovibrio desulfuricans G20

Gene: Dde_3245: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1991: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Desulfovibrio magneticus RS-1

Gene: DMR_20000: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02396: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2567: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU3033: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1868: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Lawsonia intracellularis PHE/MN1-00
L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE / L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
DMR_20040
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_20040: CoA-binding domain protein
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_3045: CoA-binding domain protein
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
CoA-binding domain protein
DMR_20020
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_20020: L-lactate permease
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
L-lactate permease
 
CRON 2.
lldP2
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -128
score = 4.15204
sequence = TGTCTGGAAAACCGTACG

Site:
position = -399
score = 4.92494
sequence = TGTCCATTTTCTCGGACT

Gene: DVU3284: L-lactate permease
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -179
score = 3.83115
sequence = CGTCCCATATTGCGGAAT

Site:
position = -130
score = 3.71567
sequence = TGTCTGAAAAAAAAGATT

Gene: DvMF_2129: L-lactate permease
 
Lawsonia intracellularis PHE/MN1-00
L-lactate permease
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD