Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Cobalamin - Pseudomonadaceae

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Pseudomonas aeruginosa PAO1 24 5
Pseudomonas entomophila L48 23 6
Pseudomonas putida KT2440 18 4
Pseudomonas syringae pv. tomato str. DC3000 19 4
Pseudomonas fluorescens Pf-5 22 5
Pseudomonas mendocina ymp 25 6
Pseudomonas stutzeri A1501 14 2
Azotobacter vinelandii AvOP 11 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
btuB
*
Pseudomonas aeruginosa PAO1

Site:
position = -303
score = 112.86
sequence = CCATCCGGCCCGTTC...

Gene: PA2911: Outer membrane vitamin B12 receptor BtuB
*
Pseudomonas entomophila L48

Site:
position = -315
score = 116.97
sequence = CAGATGCGCGCCAGT...

Gene: PSEEN2012: Outer membrane vitamin B12 receptor BtuB
*
Pseudomonas putida KT2440

Site:
position = -258
score = 119.18
sequence = CAGATGCGCGCCAGT...

Gene: PP2420: Outer membrane vitamin B12 receptor BtuB
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO5560: Outer membrane vitamin B12 receptor BtuB
*2
Pseudomonas fluorescens Pf-5

Site:
position = -154
score = 123.03
sequence = CATATGCGCGCCAGT...

Gene: PFL_2970: Outer membrane vitamin B12 receptor BtuB

Gene: PFL_0646: Outer membrane vitamin B12 receptor BtuB
*
Pseudomonas mendocina ymp

Site:
position = -394
score = 118.91
sequence = TCATATCCGCCCCGC...

Gene: Pmen_4567: Outer membrane vitamin B12 receptor BtuB
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Outer membrane vitamin B12 receptor BtuB
btuD
 
Pseudomonas aeruginosa PAO1

Gene: PA2912: Vitamin B12 ABC transporter, ATPase component BtuD
*
Pseudomonas entomophila L48

Site:
position = -314
score = 109.02
sequence = ATGCGCCCCTTGTTT...

Gene: PSEEN3066: Vitamin B12 ABC transporter, ATPase component BtuD
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO5561: Vitamin B12 ABC transporter, ATPase component BtuD
 
Pseudomonas fluorescens Pf-5

Gene: PFL_0645: Vitamin B12 ABC transporter, ATPase component BtuD
 
Pseudomonas mendocina ymp

Gene: Pmen_4566: Vitamin B12 ABC transporter, ATPase component BtuD
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Vitamin B12 ABC transporter, ATPase component BtuD
btuF
 
Pseudomonas aeruginosa PAO1

Gene: PA2913: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Pseudomonas entomophila L48

Gene: PSEEN3067: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO5562: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Pseudomonas fluorescens Pf-5

Gene: PFL_0644: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Pseudomonas mendocina ymp

Gene: Pmen_4565: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Vitamin B12 ABC transporter, B12-binding component BtuF
btuC
 
Pseudomonas aeruginosa PAO1

Gene: PA2914: Vitamin B12 ABC transporter, permease component BtuC
 
Pseudomonas entomophila L48

Gene: PSEEN3068: Vitamin B12 ABC transporter, permease component BtuC
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO5563: Vitamin B12 ABC transporter, permease component BtuC
 
Pseudomonas fluorescens Pf-5

Gene: PFL_0643: Vitamin B12 ABC transporter, permease component BtuC
 
Pseudomonas mendocina ymp

Gene: Pmen_4564: Vitamin B12 ABC transporter, permease component BtuC
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Vitamin B12 ABC transporter, permease component BtuC
 
CRON 2.
cbtC
 
Pseudomonas aeruginosa PAO1
 
Pseudomonas entomophila L48
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5
*
Pseudomonas mendocina ymp

Site:
position = -258
score = 125.14
sequence = GAGTAAGGTTGCCGC...

Gene: Pmen_3752: Predicted cobalt transporter CbtC
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Predicted cobalt transporter CbtC
 
CRON 3.
btuB1
 
Pseudomonas aeruginosa PAO1
 
Pseudomonas entomophila L48

Gene: PSEEN0599: Outer membrane vitamin B12 receptor BtuB
 
Pseudomonas putida KT2440

Gene: PP0525: Outer membrane vitamin B12 receptor BtuB
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5

Gene: PFL_5511: Outer membrane vitamin B12 receptor BtuB
*
Pseudomonas mendocina ymp

Site:
position = -290
score = 82.64
sequence = CATTCATGTTCCGCC...

Gene: Pmen_3845: Outer membrane vitamin B12 receptor BtuB
*
Pseudomonas stutzeri A1501

Site:
position = -314
score = 98.51
sequence = GCGTTTTCTTATCCG...

Gene: PST_0846: Outer membrane vitamin B12 receptor BtuB
 
Azotobacter vinelandii AvOP

Gene: Avin_07860: Outer membrane vitamin B12 receptor BtuB
Outer membrane vitamin B12 receptor BtuB
 
CRON 4.
btuB2
 
Pseudomonas aeruginosa PAO1
 
Pseudomonas entomophila L48
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
*
Pseudomonas fluorescens Pf-5

Site:
position = -189
score = 126.24
sequence = CATATGCCGCCCAGT...

Gene: PFL_2240: Outer membrane vitamin B12 receptor BtuB
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Outer membrane vitamin B12 receptor BtuB
cbiW
 
Pseudomonas aeruginosa PAO1
*
Pseudomonas entomophila L48

Site:
position = -297
score = 103.97
sequence = CATGCCGCCCAGTTT...

Gene: PSEEN2578: Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5

Gene: PFL_2239: Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis
btuF2
 
Pseudomonas aeruginosa PAO1
 
Pseudomonas entomophila L48
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5

Gene: PFL_2238: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Vitamin B12 ABC transporter, B12-binding component BtuF
 
CRON 5.
btuF
 
Pseudomonas aeruginosa PAO1
 
Pseudomonas entomophila L48
*
Pseudomonas putida KT2440

Site:
position = -226
score = 102.77
sequence = GTCTACCATGCGGGC...

Gene: PP2418: Vitamin B12 ABC transporter, B12-binding component BtuF
*
Pseudomonas syringae pv. tomato str. DC3000

Site:
position = -159
score = 123.58
sequence = TTACCATGCCGGCCG...

Gene: PSPTO3256: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Pseudomonas fluorescens Pf-5
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Vitamin B12 ABC transporter, B12-binding component BtuF
btuC
 
Pseudomonas aeruginosa PAO1
 
Pseudomonas entomophila L48
 
Pseudomonas putida KT2440

Gene: PP2417: Vitamin B12 ABC transporter, permease component BtuC
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO3257: Vitamin B12 ABC transporter, permease component BtuC
 
Pseudomonas fluorescens Pf-5
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Vitamin B12 ABC transporter, permease component BtuC
btuD
 
Pseudomonas aeruginosa PAO1
 
Pseudomonas entomophila L48
 
Pseudomonas putida KT2440

Gene: PP2416: Vitamin B12 ABC transporter, ATPase component BtuD
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO3258: Vitamin B12 ABC transporter, ATPase component BtuD
 
Pseudomonas fluorescens Pf-5
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Vitamin B12 ABC transporter, ATPase component BtuD
 
CRON 6.
btuB2
*
Pseudomonas aeruginosa PAO1

Site:
position = -303
score = 82.28
sequence = CTGCGCGCCTTGCGA...

Gene: PA1271: Outer membrane vitamin B12 receptor BtuB
 
Pseudomonas entomophila L48
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5
 
Pseudomonas mendocina ymp
*
Pseudomonas stutzeri A1501

Site:
position = -373
score = 105.73
sequence = ACCTCCGCGTCGCCT...

Gene: PST_1289: Outer membrane vitamin B12 receptor BtuB
*
Azotobacter vinelandii AvOP

Site:
position = -310
score = 91.29
sequence = CCCTGCGCGCCTCGC...

Gene: Avin_33130: Outer membrane vitamin B12 receptor BtuB / Optional hypothetical component of the B12 transporter BtuM / Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Outer membrane vitamin B12 receptor BtuB
btuM
 
Pseudomonas aeruginosa PAO1
 
Pseudomonas entomophila L48
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501

Gene: PST_1290: Optional hypothetical component of the B12 transporter BtuM
 
Azotobacter vinelandii AvOP
Optional hypothetical component of the B12 transporter BtuM
btuR
 
Pseudomonas aeruginosa PAO1

Gene: PA1272: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
*
Pseudomonas entomophila L48

Site:
position = -330
score = 96.17
sequence = CTTCGCGGCGTGTTT...

Gene: PSEEN1378: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
*
Pseudomonas putida KT2440

Site:
position = -340
score = 87.42
sequence = CTTCGCGGCGTGTTT...

Gene: PP1672: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
*
Pseudomonas syringae pv. tomato str. DC3000

Site:
position = -304
score = 113.92
sequence = CTTCGCGGCTTGTTT...

Gene: PSPTO1708: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
*
Pseudomonas fluorescens Pf-5

Site:
position = -315
score = 105.58
sequence = ACCTTCGCGACTTGT...

Gene: PFL_4431: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
*
Pseudomonas mendocina ymp

Site:
position = -394
score = 97.27
sequence = CTGCGCGCCTTGCTT...

Gene: Pmen_1750: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
 
Pseudomonas stutzeri A1501

Gene: PST_1291: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
 
Azotobacter vinelandii AvOP
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
cbiA
 
Pseudomonas aeruginosa PAO1

Gene: PA1273: Cobyrinic acid A,C-diamide synthase
 
Pseudomonas entomophila L48

Gene: PSEEN1379: Cobyrinic acid A,C-diamide synthase
 
Pseudomonas putida KT2440

Gene: PP1673: Cobyrinic acid A,C-diamide synthase
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO1709: Cobyrinic acid A,C-diamide synthase
 
Pseudomonas fluorescens Pf-5

Gene: PFL_4430: Cobyrinic acid A,C-diamide synthase
 
Pseudomonas mendocina ymp

Gene: Pmen_1751: Cobyrinic acid A,C-diamide synthase
 
Pseudomonas stutzeri A1501

Gene: PST_1292: Cobyrinic acid A,C-diamide synthase
 
Azotobacter vinelandii AvOP

Gene: Avin_33120: Cobyrinic acid A,C-diamide synthase
Cobyrinic acid A,C-diamide synthase
bluB
 
Pseudomonas aeruginosa PAO1

Gene: PA1274: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
 
Pseudomonas entomophila L48

Gene: PSEEN1380: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
 
Pseudomonas putida KT2440

Gene: PP1674: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO1710: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
 
Pseudomonas fluorescens Pf-5

Gene: PFL_4429: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
 
Pseudomonas mendocina ymp

Gene: Pmen_1752: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
 
Pseudomonas stutzeri A1501

Gene: PST_1293: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
 
Azotobacter vinelandii AvOP

Gene: Avin_33110: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
btuF
 
Pseudomonas aeruginosa PAO1
 
Pseudomonas entomophila L48
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501

Gene: PST_1294: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Azotobacter vinelandii AvOP
Vitamin B12 ABC transporter, B12-binding component BtuF
cbiB
 
Pseudomonas aeruginosa PAO1

Gene: PA1275: Adenosylcobinamide-phosphate synthase
 
Pseudomonas entomophila L48

Gene: PSEEN1381: Adenosylcobinamide-phosphate synthase
 
Pseudomonas putida KT2440

Gene: PP1675: Adenosylcobinamide-phosphate synthase
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO1711: Adenosylcobinamide-phosphate synthase
 
Pseudomonas fluorescens Pf-5

Gene: PFL_4428: Adenosylcobinamide-phosphate synthase
 
Pseudomonas mendocina ymp

Gene: Pmen_1753: Adenosylcobinamide-phosphate synthase
 
Pseudomonas stutzeri A1501

Gene: PST_1295: Adenosylcobinamide-phosphate synthase
 
Azotobacter vinelandii AvOP

Gene: Avin_33100: Adenosylcobinamide-phosphate synthase
Adenosylcobinamide-phosphate synthase
cobD
 
Pseudomonas aeruginosa PAO1

Gene: PA1276: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
 
Pseudomonas entomophila L48

Gene: PSEEN1382: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
 
Pseudomonas putida KT2440

Gene: PP1676: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO1712: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
 
Pseudomonas fluorescens Pf-5

Gene: PFL_4427: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
 
Pseudomonas mendocina ymp

Gene: Pmen_1754: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
 
Pseudomonas stutzeri A1501

Gene: PST_1296: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
 
Azotobacter vinelandii AvOP

Gene: Avin_33090: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
cbiP
 
Pseudomonas aeruginosa PAO1

Gene: PA1277: Cobyric acid synthase
 
Pseudomonas entomophila L48

Gene: PSEEN1383: Cobyric acid synthase
 
Pseudomonas putida KT2440

Gene: PP1677: Cobyric acid synthase
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO1713: Cobyric acid synthase
 
Pseudomonas fluorescens Pf-5

Gene: PFL_4426: Cobyric acid synthase
 
Pseudomonas mendocina ymp

Gene: Pmen_1755: Cobyric acid synthase
 
Pseudomonas stutzeri A1501

Gene: PST_1297: Cobyric acid synthase
 
Azotobacter vinelandii AvOP

Gene: Avin_33080: Cobyric acid synthase
Cobyric acid synthase
cobU
 
Pseudomonas aeruginosa PAO1

Gene: PA1278: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Pseudomonas entomophila L48

Gene: PSEEN1384: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Pseudomonas putida KT2440

Gene: PP1678: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO1714: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Pseudomonas fluorescens Pf-5

Gene: PFL_4425: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Pseudomonas mendocina ymp

Gene: Pmen_1756: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Pseudomonas stutzeri A1501

Gene: PST_1298: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Azotobacter vinelandii AvOP

Gene: Avin_33060: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
cobT
 
Pseudomonas aeruginosa PAO1

Gene: PA1279: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
 
Pseudomonas entomophila L48

Gene: PSEEN1385: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
 
Pseudomonas putida KT2440

Gene: PP1679: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO1715: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
 
Pseudomonas fluorescens Pf-5

Gene: PFL_4424: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
 
Pseudomonas mendocina ymp

Gene: Pmen_1757: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
 
Pseudomonas stutzeri A1501

Gene: PST_1299: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
 
Azotobacter vinelandii AvOP

Gene: Avin_33050: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
cobC
 
Pseudomonas aeruginosa PAO1

Gene: PA1280: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
 
Pseudomonas entomophila L48

Gene: PSEEN1386: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
 
Pseudomonas putida KT2440

Gene: PP1680: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO1716: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
 
Pseudomonas fluorescens Pf-5

Gene: PFL_4423: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
 
Pseudomonas mendocina ymp

Gene: Pmen_1758: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
 
Pseudomonas stutzeri A1501

Gene: PST_1300: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
 
Azotobacter vinelandii AvOP

Gene: Avin_33040: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
cobS
 
Pseudomonas aeruginosa PAO1

Gene: PA1281: Cobalamin synthase
 
Pseudomonas entomophila L48

Gene: PSEEN1387: Cobalamin synthase
 
Pseudomonas putida KT2440

Gene: PP1681: Cobalamin synthase
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO1717: Cobalamin synthase
 
Pseudomonas fluorescens Pf-5

Gene: PFL_4422: Cobalamin synthase
 
Pseudomonas mendocina ymp

Gene: Pmen_1759: Cobalamin synthase
 
Pseudomonas stutzeri A1501

Gene: PST_1301: Cobalamin synthase
 
Azotobacter vinelandii AvOP

Gene: Avin_33030: Cobalamin synthase
Cobalamin synthase
Avin_33070
 
Pseudomonas aeruginosa PAO1
 
Pseudomonas entomophila L48
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP

Gene: Avin_33070: hypothetical protein
hypothetical protein
 
CRON 7.
cobW
*
Pseudomonas aeruginosa PAO1

Site:
position = -238
score = 104.56
sequence = CGTAGCCTTGCCGGT...

Gene: PA2945: CobW GTPase involved in cobalt insertion for B12 biosynthesis
*
Pseudomonas entomophila L48

Site:
position = -299
score = 97.48
sequence = TAGCCTTGCCGCTTC...

Gene: PSEEN2432: CobW GTPase involved in cobalt insertion for B12 biosynthesis
*
Pseudomonas putida KT2440

Site:
position = -307
score = 100.75
sequence = CGTAGCCTTGCCACT...

Gene: PP3508: CobW GTPase involved in cobalt insertion for B12 biosynthesis
*
Pseudomonas syringae pv. tomato str. DC3000

Site:
position = -339
score = 106.84
sequence = CGTAGCCTTGCCGGT...

Gene: PSPTO3150: CobW GTPase involved in cobalt insertion for B12 biosynthesis
*
Pseudomonas fluorescens Pf-5

Site:
position = -98
score = 94.95
sequence = CGTAGCCTTGCGCTT...

Gene: PFL_3655: CobW GTPase involved in cobalt insertion for B12 biosynthesis
*
Pseudomonas mendocina ymp

Site:
position = -291
score = 113.12
sequence = GTAGCCTTCTCGCTT...

Gene: Pmen_4587: CobW GTPase involved in cobalt insertion for B12 biosynthesis
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
CobW GTPase involved in cobalt insertion for B12 biosynthesis
cobN
 
Pseudomonas aeruginosa PAO1

Gene: PA2944: CobN component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas entomophila L48

Gene: PSEEN2433: CobN component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas putida KT2440

Gene: PP3507: CobN component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO3149: CobN component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas fluorescens Pf-5

Gene: PFL_3654: CobN component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas mendocina ymp

Gene: Pmen_4586: CobN component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
CobN component of cobalt chelatase involved in B12 biosynthesis
chII
 
Pseudomonas aeruginosa PAO1

Gene: PA2942: ChlI component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas entomophila L48

Gene: PSEEN2434: ChlI component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas putida KT2440

Gene: PP3506: ChlI component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO3148: ChlI component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas fluorescens Pf-5

Gene: PFL_3653: ChlI component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas mendocina ymp

Gene: Pmen_4585: ChlI component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
ChlI component of cobalt chelatase involved in B12 biosynthesis
chlD
 
Pseudomonas aeruginosa PAO1

Gene: PA2941: ChlD component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas entomophila L48

Gene: PSEEN2435: ChlD component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas putida KT2440

Gene: PP3505: ChlD component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO3147: ChlD component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas fluorescens Pf-5

Gene: PFL_3652: ChlD component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas mendocina ymp

Gene: Pmen_4584: ChlD component of cobalt chelatase involved in B12 biosynthesis
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
ChlD component of cobalt chelatase involved in B12 biosynthesis
cbiL
 
Pseudomonas aeruginosa PAO1
 
Pseudomonas entomophila L48

Gene: PSEEN3208: Precorrin-6A synthase (EC 2.1.1.152)
 
Pseudomonas putida KT2440

Gene: PP3763: Precorrin-6A synthase (EC 2.1.1.152)
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO2709: Precorrin-6A synthase (EC 2.1.1.152)
 
Pseudomonas fluorescens Pf-5

Gene: PFL_2249: Precorrin-6A synthase (EC 2.1.1.152)
 
Pseudomonas mendocina ymp

Gene: Pmen_4583: Precorrin-6A synthase (EC 2.1.1.152)
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Precorrin-6A synthase (EC 2.1.1.152)
 
CRON 8.
cobG
*
Pseudomonas aeruginosa PAO1

Site:
position = -252
score = 87.78
sequence = GCATAATAGCGCGTT...

Gene: PA2906: Cobalamin biosynthesis protein CobG
 
Pseudomonas entomophila L48

Gene: PSEEN4871: Cobalamin biosynthesis protein CobG
 
Pseudomonas putida KT2440

Gene: PP4829: Cobalamin biosynthesis protein CobG
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO4877: Cobalamin biosynthesis protein CobG
 
Pseudomonas fluorescens Pf-5

Gene: PFL_0657: Cobalamin biosynthesis protein CobG
*
Pseudomonas mendocina ymp

Site:
position = -184
score = 99.84
sequence = GCCTTCGCGGGAGTG...

Gene: Pmen_4571: Cobalamin biosynthesis protein CobG
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Cobalamin biosynthesis protein CobG
cbiC
 
Pseudomonas aeruginosa PAO1

Gene: PA2905: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
 
Pseudomonas entomophila L48

Gene: PSEEN4870: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
 
Pseudomonas putida KT2440

Gene: PP4828: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO4876: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
 
Pseudomonas fluorescens Pf-5

Gene: PFL_0658: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
 
Pseudomonas mendocina ymp

Gene: Pmen_4572: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
cbiL
 
Pseudomonas aeruginosa PAO1

Gene: PA2904: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Pseudomonas entomophila L48

Gene: PSEEN4869: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Pseudomonas putida KT2440

Gene: PP4827: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO4875: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Pseudomonas fluorescens Pf-5

Gene: PFL_0659: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Pseudomonas mendocina ymp

Gene: Pmen_4573: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
cbiGH
 
Pseudomonas aeruginosa PAO1

Gene: PA2903: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
 
Pseudomonas entomophila L48

Gene: PSEEN4868: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
 
Pseudomonas putida KT2440

Gene: PP4826: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO4874: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
 
Pseudomonas fluorescens Pf-5

Gene: PFL_0660: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
 
Pseudomonas mendocina ymp

Gene: Pmen_4574: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
 
CRON 9.
cbtB
 
Pseudomonas aeruginosa PAO1
*
Pseudomonas entomophila L48

Site:
position = -333
score = 102.94
sequence = TGCTAGCGCATTGCG...

Gene: PSEEN2431: hypothetical protein
 
Pseudomonas putida KT2440
*
Pseudomonas syringae pv. tomato str. DC3000

Site:
position = -309
score = 110.34
sequence = CTGTGCACCTTGTTT...

Gene: PSPTO3151: hypothetical protein
*
Pseudomonas fluorescens Pf-5

Site:
position = -156
score = 105.34
sequence = CTACACACCTTGTTA...

Gene: PFL_3656: hypothetical protein
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
hypothetical protein
cbtA
*
Pseudomonas aeruginosa PAO1

Site:
position = -58
score = 77.81
sequence = CTAGGCGGGTTGTCC...

Gene: PA2946: Predicted cobalt transporter CbtA
 
Pseudomonas entomophila L48

Gene: PSEEN2429: Predicted cobalt transporter CbtA
 
Pseudomonas putida KT2440
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO3152: Predicted cobalt transporter CbtA
 
Pseudomonas fluorescens Pf-5

Gene: PFL_3657: Predicted cobalt transporter CbtA
 
Pseudomonas mendocina ymp
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Predicted cobalt transporter CbtA
cobE
 
Pseudomonas aeruginosa PAO1

Gene: PA2947: Cobalamin biosynthesis protein CobE
 
Pseudomonas entomophila L48

Gene: PSEEN2428: Cobalamin biosynthesis protein CobE
 
Pseudomonas putida KT2440

Gene: PP3409: Cobalamin biosynthesis protein CobE
 
Pseudomonas syringae pv. tomato str. DC3000
 
Pseudomonas fluorescens Pf-5

Gene: PFL_3658: Cobalamin biosynthesis protein CobE
 
Pseudomonas mendocina ymp

Gene: Pmen_4588: Cobalamin biosynthesis protein CobE
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Cobalamin biosynthesis protein CobE
cbiF
 
Pseudomonas aeruginosa PAO1

Gene: PA2948: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
 
Pseudomonas entomophila L48

Gene: PSEEN2427: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
 
Pseudomonas putida KT2440

Gene: PP3410: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
 
Pseudomonas syringae pv. tomato str. DC3000

Gene: PSPTO3154: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
 
Pseudomonas fluorescens Pf-5

Gene: PFL_3659: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
 
Pseudomonas mendocina ymp

Gene: Pmen_4589: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
 
Pseudomonas stutzeri A1501
 
Azotobacter vinelandii AvOP
Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulatory Sites [ FASTA format ] DOWNLOAD