Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Glycine - Pasteurellales

Properties
Regulator type: RNA regulatory element
Name: Glycine
RFAM: RF00504
Regulation mode:
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Haemophilus influenzae Rd KW20 1 1
Aggregatibacter aphrophilus NJ8700 1 1
Pasteurella multocida subsp. multocida str. Pm70 1 1
Mannheimia succiniciproducens MBEL55E 1 1
Actinobacillus succinogenes 130Z 1 1
Haemophilus somnus 2336 1 1
Actinobacillus pleuropneumoniae serovar 7 str. AP76 1 1
Haemophilus ducreyi 35000HP 2 1
Haemophilus parasuis SH0165 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
HD0460
 
Haemophilus influenzae Rd KW20
 
Aggregatibacter aphrophilus NJ8700
 
Pasteurella multocida subsp. multocida str. Pm70
 
Mannheimia succiniciproducens MBEL55E
 
Actinobacillus succinogenes 130Z
 
Haemophilus somnus 2336
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
*
Haemophilus ducreyi 35000HP

Site:
position = -36
score = 53.18
sequence = CCTTGGAGAGATCCA...

Site:
position = -130
score = 29.49
sequence = TGAAGGTGGCTGGAG...

Gene: HD0460: hypothetical protein
 
Haemophilus parasuis SH0165
hypothetical protein
glyP
*
Haemophilus influenzae Rd KW20

Site:
position = -303
score = 31.41
sequence = GATGAAGGTAGCTGG...

Site:
position = -222
score = 58.77
sequence = TGGACGAACCCTTGG...

Gene: HI0883: Sodium/glycine symporter GlyP
*
Aggregatibacter aphrophilus NJ8700

Site:
position = -218
score = 59.55
sequence = GACGAACCCTTGGAG...

Site:
position = -299
score = 36.02
sequence = TGAAGGTAGCTGGAG...

Gene: NT05HA_1471: Sodium/glycine symporter GlyP
*
Pasteurella multocida subsp. multocida str. Pm70

Site:
position = -236
score = 63.68
sequence = GACGAACCCTTGGAG...

Site:
position = -322
score = 30.93
sequence = TGAAGGTAGCTGGAG...

Gene: PM0091: Sodium/glycine symporter GlyP
*
Mannheimia succiniciproducens MBEL55E

Site:
position = -311
score = 31.2
sequence = GATGAAGGTAGCTGG...

Site:
position = -224
score = 62.17
sequence = TGGACGAACCCTTGG...

Gene: MS0353: Sodium/glycine symporter GlyP
*
Actinobacillus succinogenes 130Z

Site:
position = -252
score = 34.78
sequence = CGAAGGTAGCTGGAG...

Site:
position = -165
score = 56.16
sequence = GACGAACCCTTGGAG...

Gene: Asuc_0747: Sodium/glycine symporter GlyP
*
Haemophilus somnus 2336

Site:
position = -293
score = 29.06
sequence = TGAAGGTAGCTGGAG...

Site:
position = -212
score = 61.96
sequence = GACGAACCCTTGGAG...

Gene: HSM_0760: Sodium/glycine symporter GlyP
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76

Site:
position = -209
score = 53.75
sequence = ACCCTTGGAGAGATC...

Site:
position = -298
score = 37.88
sequence = GATGAAGGTAGCTGG...

Gene: APP7_1185: Sodium/glycine symporter GlyP
 
Haemophilus ducreyi 35000HP

Gene: HD0461: Sodium/glycine symporter GlyP
*
Haemophilus parasuis SH0165

Site:
position = -242
score = 56.91
sequence = CCTTGGAGAGATCCA...

Site:
position = -329
score = 46.34
sequence = TGAAGATAGCTGGAG...

Gene: HAPS_1007: Sodium/glycine symporter GlyP
Sodium/glycine symporter GlyP
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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