Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Lysine - Pasteurellales

Properties
Regulator type: RNA regulatory element
Name: Lysine
RFAM: RF00168
Regulation mode:
Biological process: Lysine biosynthesis
Effector: Lysine
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Haemophilus influenzae Rd KW20 1 1
Aggregatibacter aphrophilus NJ8700 1 1
Pasteurella multocida subsp. multocida str. Pm70 1 1
Mannheimia succiniciproducens MBEL55E 1 1
Actinobacillus succinogenes 130Z
Haemophilus somnus 2336 1 1
Actinobacillus pleuropneumoniae serovar 7 str. AP76 2 2
Haemophilus ducreyi 35000HP 2 2
Haemophilus parasuis SH0165 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
lysW
*
Haemophilus influenzae Rd KW20

Site:
position = -196
score = 127.69
sequence = CTACAAAAGTAGAGG...

Gene: HI1586: Predicted lysine transporter, NhaC family
*
Aggregatibacter aphrophilus NJ8700

Site:
position = -272
score = 136.77
sequence = ACGTATGTAGAGGTG...

Gene: NT05HA_0885: Predicted lysine transporter, NhaC family
*
Pasteurella multocida subsp. multocida str. Pm70

Site:
position = -266
score = 131.56
sequence = CTACTTGTGTAGAGG...

Gene: PM0871: Predicted lysine transporter, NhaC family
*
Mannheimia succiniciproducens MBEL55E

Site:
position = -267
score = 134.01
sequence = CTACACATGTAGAGG...

Gene: MS1321: Predicted lysine transporter, NhaC family
 
Actinobacillus succinogenes 130Z

Gene: Asuc_1038: Predicted lysine transporter, NhaC family
*
Haemophilus somnus 2336

Site:
position = -258
score = 134.05
sequence = ACATATGTAGAGGTG...

Gene: HSM_1255: Predicted lysine transporter, NhaC family
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76

Site:
position = -296
score = 138.3
sequence = CAAATCGTAGAGGTG...

Gene: APP7_0526: Predicted lysine transporter, NhaC family
*
Haemophilus ducreyi 35000HP

Site:
position = -102
score = 135.12
sequence = CAAATTGTAGAGGTG...

Gene: HD1227: Predicted lysine transporter, NhaC family
*
Haemophilus parasuis SH0165

Site:
position = -297
score = 138.45
sequence = CAAATTGTAGAGGTG...

Gene: HAPS_1122: Predicted lysine transporter, NhaC family
Predicted lysine transporter, NhaC family
 
CRON 2.
lysC
 
Haemophilus influenzae Rd KW20

Gene: HI1632: Aspartokinase (EC 2.7.2.4)
 
Aggregatibacter aphrophilus NJ8700

Gene: NT05HA_1404: Aspartokinase (EC 2.7.2.4)
 
Pasteurella multocida subsp. multocida str. Pm70

Gene: PM0937: Aspartokinase (EC 2.7.2.4)
 
Mannheimia succiniciproducens MBEL55E

Gene: MS1613: Aspartokinase (EC 2.7.2.4)
 
Actinobacillus succinogenes 130Z

Gene: Asuc_0925: Aspartokinase (EC 2.7.2.4)
 
Haemophilus somnus 2336
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76

Site:
position = -279
score = 57.21
sequence = ATTGCGGGAGAGGCG...

Gene: APP7_0752: Aspartokinase (EC 2.7.2.4)
*
Haemophilus ducreyi 35000HP

Site:
position = -296
score = 51.58
sequence = TCATTGCGGGAGAGG...

Gene: HD1375: Aspartokinase (EC 2.7.2.4)
 
Haemophilus parasuis SH0165
Aspartokinase (EC 2.7.2.4)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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