Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog L10_leader - Mycobacteriaceae

Properties
Regulator type: RNA regulatory element
Name: L10_leader
RFAM: RF00557
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Actinobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Mycobacterium tuberculosis H37Rv
Mycobacterium leprae TN
Mycobacterium marinum M
Mycobacterium avium 104
Mycobacterium sp. JLS
Mycobacterium vanbaalenii PYR-1
Mycobacterium flavescens PYR-GCK
Mycobacterium smegmatis str. MC2 155
Mycobacterium abscessus ATCC 19977 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rplJ
 
Mycobacterium tuberculosis H37Rv

Gene: Rv0651: LSU ribosomal protein L10p (P0)
 
Mycobacterium leprae TN

Gene: ML1896: LSU ribosomal protein L10p (P0)
 
Mycobacterium marinum M

Gene: MMAR_0990: LSU ribosomal protein L10p (P0)
 
Mycobacterium avium 104

Gene: MAV_4508: LSU ribosomal protein L10p (P0)
 
Mycobacterium sp. JLS

Gene: Mjls_0994: LSU ribosomal protein L10p (P0)
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_1252: LSU ribosomal protein L10p (P0)
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_5101: LSU ribosomal protein L10p (P0)
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_1364: LSU ribosomal protein L10p (P0)
*
Mycobacterium abscessus ATCC 19977

Site:
position = -235
score = 16.69
sequence = GTAACCTAATCCAGC...

Gene: MAB_3877c: LSU ribosomal protein L10p (P0)
LSU ribosomal protein L10p (P0)
rplL
 
Mycobacterium tuberculosis H37Rv

Gene: Rv0652: LSU ribosomal protein L7/L12 (P1/P2)
 
Mycobacterium leprae TN

Gene: ML1895: LSU ribosomal protein L7/L12 (P1/P2)
 
Mycobacterium marinum M

Gene: MMAR_0991: LSU ribosomal protein L7/L12 (P1/P2)
 
Mycobacterium avium 104

Gene: MAV_4507: LSU ribosomal protein L7/L12 (P1/P2)
 
Mycobacterium sp. JLS

Gene: Mjls_0995: LSU ribosomal protein L7/L12 (P1/P2)
 2
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_0786: LSU ribosomal protein L7/L12 (P1/P2)

Gene: Mvan_1253: LSU ribosomal protein L7/L12 (P1/P2)
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_5100: LSU ribosomal protein L7/L12 (P1/P2)
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_1365: LSU ribosomal protein L7/L12 (P1/P2)
 
Mycobacterium abscessus ATCC 19977

Gene: MAB_3876c: LSU ribosomal protein L7/L12 (P1/P2)
LSU ribosomal protein L7/L12 (P1/P2)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD