Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog T-box(Gly) - Deinococcus-Thermus

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Gly-tRNA
Phylum: Deinococcus-Thermus
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Deinococcus radiodurans R1 1 1
Deinococcus geothermalis DSM 11300 1 1
Deinococcus deserti VCD115 1 1
Thermus thermophilus HB27
Thermus aquaticus Y51MC23
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
glyS
*
Deinococcus radiodurans R1

Site:
position = -260
score = 15.09
sequence = CGTTGAACCGCAGGA...

Gene: DR2059: Glycyl-tRNA synthetase (EC 6.1.1.14)
*
Deinococcus geothermalis DSM 11300

Site:
position = -255
score = 61.69
sequence = CCCCAGCGTTGATCC...

Gene: Dgeo_1716: Glycyl-tRNA synthetase (EC 6.1.1.14)
*
Deinococcus deserti VCD115

Site:
position = -257
score = 46.93
sequence = GGCAGGCGTTGATCC...

Gene: Deide_17500: Glycyl-tRNA synthetase (EC 6.1.1.14)
 
Thermus thermophilus HB27

Gene: TTC0175: Glycyl-tRNA synthetase (EC 6.1.1.14)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_3594: Glycyl-tRNA synthetase (EC 6.1.1.14)
Glycyl-tRNA synthetase (EC 6.1.1.14)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD