Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog FMN - Deinococcus-Thermus

Properties
Regulator type: RNA regulatory element
Name: FMN
RFAM: RF00050
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Phylum: Deinococcus-Thermus
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Deinococcus radiodurans R1 4 1
Deinococcus geothermalis DSM 11300 4 1
Deinococcus deserti VCD115 1 1
Thermus thermophilus HB27 3 1
Thermus aquaticus Y51MC23 3 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ribD
*
Deinococcus radiodurans R1

Site:
position = -184
score = 78.29
sequence = ACCTCTTTCGGGGCG...

Gene: DR0153: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
*
Deinococcus geothermalis DSM 11300

Site:
position = -188
score = 87.46
sequence = GCTTCCTTCGGGGCG...

Gene: Dgeo_0300: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
*
Deinococcus deserti VCD115

Site:
position = -306
score = 27.56
sequence = CAGCTTCCTTCGGGG...

Gene: Deide_02270: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
*
Thermus thermophilus HB27

Site:
position = -126
score = 98.53
sequence = GCACCTCCTTCGGGG...

Gene: TTC0699: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
*
Thermus aquaticus Y51MC23

Site:
position = -122
score = 92.98
sequence = ACCTCCTTCGGGGCG...

Gene: TaqDRAFT_3862: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
ribE
 
Deinococcus radiodurans R1

Gene: DR0154: Riboflavin synthase alpha chain (EC 2.5.1.9)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0301: Riboflavin synthase alpha chain (EC 2.5.1.9)
 
Deinococcus deserti VCD115

Gene: Deide_02260: Riboflavin synthase alpha chain (EC 2.5.1.9)
 
Thermus thermophilus HB27

Gene: TTC0698: Riboflavin synthase alpha chain (EC 2.5.1.9)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_3863: Riboflavin synthase alpha chain (EC 2.5.1.9)
Riboflavin synthase alpha chain (EC 2.5.1.9)
ribBA
 
Deinococcus radiodurans R1

Gene: DR0155: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0302: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
 
Deinococcus deserti VCD115

Gene: Deide_02250: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
 
Thermus thermophilus HB27

Gene: TTC0697: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_3864: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
ribH
 
Deinococcus radiodurans R1

Gene: DR0156: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0303: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
Deinococcus deserti VCD115

Gene: Deide_02240: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
Thermus thermophilus HB27
 
Thermus aquaticus Y51MC23
6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD