Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog AcnR - Corynebacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Tricarboxylic acid cycle
Effector: Citrate
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Corynebacterium urealyticum DSM 7109 2 1
Corynebacterium kroppenstedtii DSM 44385 2 1
Corynebacterium jeikeium K411 2 1
Corynebacterium glutamicum ATCC 13032 2 1
Corynebacterium efficiens YS-314 1 1
Corynebacterium diphtheriae NCTC 13129 2 1
Corynebacterium aurimucosum ATCC 700975 2 1
Corynebacterium amycolatum SK46 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
acnA
*
Corynebacterium urealyticum DSM 7109

Site:
position = -191
score = 4.24671
sequence = GCGAATTTCTGTACGG

Gene: cur_1021: Aconitate hydratase (EC 4.2.1.3)
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -216
score = 5.71063
sequence = CAGTACGTCTGTACTG

Gene: ckrop_0938: Aconitate hydratase (EC 4.2.1.3)
*
Corynebacterium jeikeium K411

Site:
position = -157
score = 5.84284
sequence = CAGAACAATCGTACTG

Gene: jk0969: Aconitate hydratase (EC 4.2.1.3)
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -139
score = 5.84284
sequence = CAGAACGCTTGTACTG

Gene: cg1737: Aconitate hydratase (EC 4.2.1.3)
*
Corynebacterium efficiens YS-314

Site:
position = -135
score = 6.01206
sequence = CAGAACGATCGTACTG

Gene: CE1661: Aconitate hydratase (EC 4.2.1.3)
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -170
score = 5.29113
sequence = CATTACAACCGTACTG

Gene: DIP1283: Aconitate hydratase (EC 4.2.1.3)
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -189
score = 5.93949
sequence = CAGAACGCCCGTACTG

Gene: cauri_1236: Aconitate hydratase (EC 4.2.1.3)
*
Corynebacterium amycolatum SK46

Site:
position = -211
score = 6.01206
sequence = CAGAACGTTCGTACTG

Gene: CORAM0001_0960: Aconitate hydratase (EC 4.2.1.3)
Aconitate hydratase (EC 4.2.1.3)
acnR
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1020: Aconitase gene transcriptional regulator AcnR, TetR family
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0939: Aconitase gene transcriptional regulator AcnR, TetR family
 
Corynebacterium jeikeium K411

Gene: jk0970: Aconitase gene transcriptional regulator AcnR, TetR family
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1738: Aconitase gene transcriptional regulator AcnR, TetR family
 
Corynebacterium efficiens YS-314

Gene: CE1663: Aconitase gene transcriptional regulator AcnR, TetR family
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1284: Aconitase gene transcriptional regulator AcnR, TetR family
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1235: Aconitase gene transcriptional regulator AcnR, TetR family
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0959: Aconitase gene transcriptional regulator AcnR, TetR family
Aconitase gene transcriptional regulator AcnR, TetR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD