Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog QsuR - Corynebacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator
Biological process: Aromatic amino acid metabolism
Effector: Shikimate; Quinate
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Corynebacterium amycolatum SK46
Corynebacterium aurimucosum ATCC 700975
Corynebacterium diphtheriae NCTC 13129
Corynebacterium efficiens YS-314 5 2
Corynebacterium glutamicum ATCC 13032 5 2
Corynebacterium jeikeium K411
Corynebacterium kroppenstedtii DSM 44385
Corynebacterium urealyticum DSM 7109
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
qsuA
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129
*
Corynebacterium efficiens YS-314

Site:
position = -267
score = 6.28926
sequence = TTTGTACTATAGGTCACA

Gene: CE0440: Predicted quinate/shikimate transporter
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -216
score = 6.28926
sequence = TTTGTACTATAGATCACA

Gene: cg0501: Predicted quinate/shikimate transporter
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Predicted quinate/shikimate transporter
qsuB
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314

Gene: CE0441: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
 
Corynebacterium glutamicum ATCC 13032

Gene: cg0502: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
qsuC
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314

Gene: CE0442: 3-dehydroquinate dehydratase II (EC 4.2.1.10)
 
Corynebacterium glutamicum ATCC 13032

Gene: cg0503: 3-dehydroquinate dehydratase II (EC 4.2.1.10)
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
3-dehydroquinate dehydratase II (EC 4.2.1.10)
qsuD
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314

Gene: CE0443: Quinate/shikimate 5-dehydrogenase
 
Corynebacterium glutamicum ATCC 13032

Gene: cg0504: Quinate/shikimate 5-dehydrogenase
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Quinate/shikimate 5-dehydrogenase
 
CRON 2.
qsuR
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129
*
Corynebacterium efficiens YS-314

Site:
position = -91
score = 6.28926
sequence = TGTGACCTATAGTACAAA

Gene: CE0439: Quinate and shikimate utilization transcriptional regulator QsuR, LysR family
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -77
score = 6.28926
sequence = TGTGATCTATAGTACAAA

Gene: cg0500: Quinate and shikimate utilization transcriptional regulator QsuR, LysR family
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Quinate and shikimate utilization transcriptional regulator QsuR, LysR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD