Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog HspR - Corynebacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: pepressor
Biological process: Heat shock response
Effector: Heat shock
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 24 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Corynebacterium amycolatum SK46 5 2
Corynebacterium aurimucosum ATCC 700975 5 2
Corynebacterium diphtheriae NCTC 13129 5 3
Corynebacterium efficiens YS-314 5 2
Corynebacterium glutamicum ATCC 13032 5 2
Corynebacterium jeikeium K411 5 3
Corynebacterium kroppenstedtii DSM 44385 3 2
Corynebacterium urealyticum DSM 7109 3 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
dnaK
*
Corynebacterium amycolatum SK46

Site:
position = -108
score = 5.97789
sequence = TTGAGTCAGACACACTCAA

Gene: CORAM0001_1650: Chaperone protein DnaK
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -56
score = 4.77901
sequence = TTGAGTCGCGCATTATCAA

Gene: cauri_2321: Chaperone protein DnaK
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -123
score = 5.98512
sequence = TTGAGTGACACCGGCTCAA

Gene: DIP2120: Chaperone protein DnaK
*
Corynebacterium efficiens YS-314

Site:
position = -102
score = 5.29163
sequence = TTGAGTGTGATCCACTCAA

Gene: CE2629: Chaperone protein DnaK
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -283
score = 4.77089
sequence = TTGAGTGGGACCTGTTGAA

Site:
position = -114
score = 5.80542
sequence = TTGAGTCAGGCAGGCTCAA

Gene: cg3100: Chaperone protein DnaK
*
Corynebacterium jeikeium K411

Site:
position = -138
score = 5.12289
sequence = TTGAGCGGGTTAAGCTCAA

Gene: jk0179: Chaperone protein DnaK
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -205
score = 5.02147
sequence = TTGAGCGAGTAAGACTCAA

Site:
position = -139
score = 4.54214
sequence = TTGAGTCTGATTCACTCAG

Gene: ckrop_0278: Chaperone protein DnaK
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1815: Chaperone protein DnaK
Chaperone protein DnaK
grpE
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_1651: Heat shock protein GrpE
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2320: Heat shock protein GrpE
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP2119: Heat shock protein GrpE
 
Corynebacterium efficiens YS-314

Gene: CE2628: Heat shock protein GrpE
 
Corynebacterium glutamicum ATCC 13032

Gene: cg3099: Heat shock protein GrpE
 
Corynebacterium jeikeium K411

Gene: jk0180: Heat shock protein GrpE
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0279: Heat shock protein GrpE
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1814: Heat shock protein GrpE
Heat shock protein GrpE
dnaJ
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_1652: Chaperone protein DnaJ
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2319: Chaperone protein DnaJ
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -131
score = 4.8857
sequence = TCCAGCAGAAGATGCTCAA

Gene: DIP2118: Chaperone protein DnaJ
 
Corynebacterium efficiens YS-314

Gene: CE2627: Chaperone protein DnaJ
 
Corynebacterium glutamicum ATCC 13032

Gene: cg3098: Chaperone protein DnaJ
*
Corynebacterium jeikeium K411

Site:
position = -70
score = 4.8459
sequence = TTCAGCGCGGTAGACTCAA

Gene: jk0183: Chaperone protein DnaJ
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0283: Chaperone protein DnaJ
*
Corynebacterium urealyticum DSM 7109

Site:
position = -116
score = 4.8459
sequence = TTCAGCGCGGTAGACTCAA

Gene: cur_1811: Chaperone protein DnaJ
Chaperone protein DnaJ
hspR
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_1653: Heat shock response transcriptional regulator HspR, MerR family
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2318: Heat shock response transcriptional regulator HspR, MerR family
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP2117: Heat shock response transcriptional regulator HspR, MerR family
 
Corynebacterium efficiens YS-314

Gene: CE2626: Heat shock response transcriptional regulator HspR, MerR family
 
Corynebacterium glutamicum ATCC 13032

Gene: cg3097: Heat shock response transcriptional regulator HspR, MerR family
 
Corynebacterium jeikeium K411

Gene: jk0184: Heat shock response transcriptional regulator HspR, MerR family
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0284: Heat shock response transcriptional regulator HspR, MerR family
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1810: Heat shock response transcriptional regulator HspR, MerR family
Heat shock response transcriptional regulator HspR, MerR family
 
CRON 2.
clpB
*
Corynebacterium amycolatum SK46

Site:
position = -74
score = 6.74973
sequence = TTGAGTGGAACAGGCTCAA

Site:
position = -22
score = 5.06083
sequence = TTGAGTCAAAGGGGCGCAA

Gene: CORAM0001_1383: ATP-dependent chaperone ClpB
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -108
score = 6.86659
sequence = TTGAGTGGAACAGACTCAA

Gene: cauri_2310: ATP-dependent chaperone ClpB
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -76
score = 6.54882
sequence = TTGAGTGGAACAAACTCAA

Gene: DIP2104: ATP-dependent chaperone ClpB
*
Corynebacterium efficiens YS-314

Site:
position = -151
score = 6.72665
sequence = TTGAGTGGAATAGACTCAA

Gene: CE2613: ATP-dependent chaperone ClpB
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -132
score = 6.64202
sequence = TTGAGTGGAACATACTCAA

Gene: cg3079: ATP-dependent chaperone ClpB
*
Corynebacterium jeikeium K411

Site:
position = -77
score = 5.00333
sequence = TTGAGTCAGGTGTACTCAA

Site:
position = -107
score = 6.35327
sequence = TTGAGCGGAATAGACTCAA

Gene: jk0201: ATP-dependent chaperone ClpB
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -177
score = 5.04099
sequence = TTGCGTGACGTACACTCAA

Site:
position = -229
score = 6.72665
sequence = TTGAGTGGAATAGACTCAA

Gene: ckrop_0294: ATP-dependent chaperone ClpB
*
Corynebacterium urealyticum DSM 7109

Site:
position = -65
score = 4.78205
sequence = TTGAGTCTAGTGAACTCAA

Site:
position = -95
score = 6.72665
sequence = TTGAGTGGAATAGACTCAA

Gene: cur_1804: ATP-dependent chaperone ClpB
ATP-dependent chaperone ClpB
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD