Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog GntR - Corynebacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor, activator
Biological process: Gluconate utilization
Effector: Gluconate
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 13 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Corynebacterium amycolatum SK46
Corynebacterium aurimucosum ATCC 700975 1 1
Corynebacterium diphtheriae NCTC 13129
Corynebacterium efficiens YS-314 9 5
Corynebacterium glutamicum ATCC 13032 11 7
Corynebacterium jeikeium K411
Corynebacterium kroppenstedtii DSM 44385
Corynebacterium urealyticum DSM 7109
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
gntR
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2110: Gluconate utilization transcriptional regulator GntR, GntR family
 
Corynebacterium diphtheriae NCTC 13129
*
Corynebacterium efficiens YS-314

Site:
position = -41
score = 4.03795
sequence = AATGGTAATCACATT

Gene: CE2422: Gluconate utilization transcriptional regulator GntR, GntR family
*2
Corynebacterium glutamicum ATCC 13032

Site:
position = -61
score = 4.03795
sequence = AATGGTAATCACATT

Gene: cg2783: Gluconate utilization transcriptional regulator GntR, GntR family

Gene: cg1935: Gluconate utilization transcriptional regulator GntR, GntR family
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Gluconate utilization transcriptional regulator GntR, GntR family
 
CRON 2.
tkt
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0938: Transketolase (EC 2.2.1.1)
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1208: Transketolase (EC 2.2.1.1)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1302: Transketolase (EC 2.2.1.1)
*
Corynebacterium efficiens YS-314

Site:
position = -233
score = 4.97883
sequence = TTTGGTAATACTTTT

Gene: CE1694: Transketolase (EC 2.2.1.1)
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -217
score = 5.09527
sequence = ATTGATCACACCTTT

Gene: cg1774: Transketolase (EC 2.2.1.1)
 
Corynebacterium jeikeium K411

Gene: jk0992: Transketolase (EC 2.2.1.1)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0959: Transketolase (EC 2.2.1.1)
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0999: Transketolase (EC 2.2.1.1)
Transketolase (EC 2.2.1.1)
tal
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0937: Transaldolase (EC 2.2.1.2)
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1207: Transaldolase (EC 2.2.1.2)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1303: Transaldolase (EC 2.2.1.2)
 
Corynebacterium efficiens YS-314

Gene: CE1695: Transaldolase (EC 2.2.1.2)
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1776: Transaldolase (EC 2.2.1.2)
 
Corynebacterium jeikeium K411

Gene: jk0993: Transaldolase (EC 2.2.1.2)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0960: Transaldolase (EC 2.2.1.2)
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0998: Transaldolase (EC 2.2.1.2)
Transaldolase (EC 2.2.1.2)
zwf
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0933: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1206: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1304: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Corynebacterium efficiens YS-314

Gene: CE1696: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1778: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Corynebacterium jeikeium K411

Gene: jk0994: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0961: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0997: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
opcA
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0932: Glucose-6-P dehydrogenase subunit
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1205: Glucose-6-P dehydrogenase subunit
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1305: Glucose-6-P dehydrogenase subunit
 
Corynebacterium efficiens YS-314

Gene: CE1697: Glucose-6-P dehydrogenase subunit
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1779: Glucose-6-P dehydrogenase subunit
 
Corynebacterium jeikeium K411

Gene: jk0995: Glucose-6-P dehydrogenase subunit
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0962: Glucose-6-P dehydrogenase subunit
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0996: Glucose-6-P dehydrogenase subunit
Glucose-6-P dehydrogenase subunit
devB
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0931: 6-phosphogluconolactonase (EC 3.1.1.31)
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1204: 6-phosphogluconolactonase (EC 3.1.1.31)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1306: 6-phosphogluconolactonase (EC 3.1.1.31)
 
Corynebacterium efficiens YS-314

Gene: CE1698: 6-phosphogluconolactonase (EC 3.1.1.31)
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1780: 6-phosphogluconolactonase (EC 3.1.1.31)
 
Corynebacterium jeikeium K411

Gene: jk0996: 6-phosphogluconolactonase (EC 3.1.1.31)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0963: 6-phosphogluconolactonase (EC 3.1.1.31)
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0995: 6-phosphogluconolactonase (EC 3.1.1.31)
6-phosphogluconolactonase (EC 3.1.1.31)
 
CRON 3.
gntP
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_0620: Gluconate permease
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP0253: Gluconate permease
*
Corynebacterium efficiens YS-314

Site:
position = -59
score = 4.82777
sequence = ATAGATCATACTATT

Gene: CE0611: Gluconate permease
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -50
score = 4.88841
sequence = TTTGATCATACTAAT

Gene: cg3216: Gluconate permease
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Gluconate permease
 
CRON 4.
gnd
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_1879: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1296: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1213: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
*
Corynebacterium efficiens YS-314

Site:
position = -46
score = 5.12607
sequence = AATGATATTACCTTT

Gene: CE1588: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -41
score = 5.00485
sequence = AATGGTCACACCTTT

Gene: cg1643: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
 
Corynebacterium jeikeium K411

Gene: jk0912: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0877: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1065: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
 
CRON 5.
gntK
 
Corynebacterium amycolatum SK46
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -291
score = 3.64386
sequence = GATGGTAACACCATG

Gene: cauri_0619: Gluconokinase (EC 2.7.1.12)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP0254: Gluconokinase (EC 2.7.1.12)
*
Corynebacterium efficiens YS-314

Site:
position = -135
score = 4.949
sequence = TATGATATTACCATT

Gene: CE2384: Gluconokinase (EC 2.7.1.12)
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -76
score = 4.70313
sequence = TATGATAGTACCAAT

Gene: cg2732: Gluconokinase (EC 2.7.1.12)
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Gluconokinase (EC 2.7.1.12)
 
CRON 6.
ptsG
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_1477: Glucose-specific PTS system, IIABC component
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2289: Glucose-specific PTS system, IIABC component
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1151: Glucose-specific PTS system, IIABC component
 
Corynebacterium efficiens YS-314

Gene: CE1458: Glucose-specific PTS system, IIABC component
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -326
score = 4.37784
sequence = AAAAGTATTACCTTT

Gene: cg1537: Glucose-specific PTS system, IIABC component
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0817: Glucose-specific PTS system, IIABC component
 
Corynebacterium urealyticum DSM 7109
Glucose-specific PTS system, IIABC component
 
CRON 7.
ptsS
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_0403: Sucrose-specific PTS system, IIBC component
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -174
score = 3.9665
sequence = AAAGGTGACACTATT

Gene: cg2925: Sucrose-specific PTS system, IIBC component
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1696: Sucrose-specific PTS system, IIBC component
 
Corynebacterium urealyticum DSM 7109
Sucrose-specific PTS system, IIBC component
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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