Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog RosR - Corynebacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: MarR
Regulation mode: repressor
Biological process: Peroxide stress response
Effector: Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+)
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 43 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Corynebacterium amycolatum SK46 3 3
Corynebacterium aurimucosum ATCC 700975 6 5
Corynebacterium diphtheriae NCTC 13129 5 4
Corynebacterium efficiens YS-314 9 8
Corynebacterium glutamicum ATCC 13032 17 10
Corynebacterium jeikeium K411 3 3
Corynebacterium kroppenstedtii DSM 44385 5 4
Corynebacterium urealyticum DSM 7109 5 4
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
yqjG
*
Corynebacterium amycolatum SK46

Site:
position = 4
score = 5.16877
sequence = TTGGTGGCATGACAACAA

Gene: CORAM0001_1019: Glutathione S-transferase domain protein
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -42
score = 5.71942
sequence = TTGTTGACGTATCAAATA

Gene: cauri_0351: Glutathione S-transferase domain protein
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = 19
score = 5.54742
sequence = TTGTTGATATGTCCACAC

Gene: DIP1093: Glutathione S-transferase domain protein
*
Corynebacterium efficiens YS-314

Site:
position = 37
score = 5.63141
sequence = TTGTTGACATATCACATA

Gene: CE1359: Glutathione S-transferase domain protein
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -43
score = 6.02843
sequence = TTGTTGACATATCATCTA

Gene: cg1426: Glutathione S-transferase domain protein
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
*
Corynebacterium urealyticum DSM 7109

Site:
position = -87
score = 5.44857
sequence = TTGGTGACATATCATCCA

Gene: cur_0747: Glutathione S-transferase domain protein
Glutathione S-transferase domain protein
 
CRON 2.
ywcH
 
Corynebacterium amycolatum SK46
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -30
score = 5.28865
sequence = TTGTTGACACGTCACAGA

Gene: cauri_1400: Predicted monooxygenase
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -66
score = 5.75859
sequence = TTGTTGATATGTCATATA

Gene: DIP1436: Predicted monooxygenase
*
Corynebacterium efficiens YS-314

Site:
position = -43
score = 6.10011
sequence = TTGATGATATATCAACAA

Gene: CE1758: Predicted monooxygenase
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -42
score = 6.06495
sequence = TTGGTGACATATCAACAA

Site:
position = -72
score = 4.97344
sequence = TTGTTGACGCATCCATTA

Gene: cg1848: Predicted monooxygenase
 
Corynebacterium jeikeium K411
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -54
score = 5.58436
sequence = TTGTTGATATGTCATGTA

Gene: ckrop_1424: Predicted monooxygenase
*
Corynebacterium urealyticum DSM 7109

Site:
position = -39
score = 4.76414
sequence = TAGGTGACATGTCACGTA

Gene: cur_1546: Predicted monooxygenase
Predicted monooxygenase
cg1849
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1849: Hypothetical protein
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Hypothetical protein
msuE
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1401: FMN reductase (EC 1.5.1.29)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1437: FMN reductase (EC 1.5.1.29)
 
Corynebacterium efficiens YS-314

Gene: CE1759: FMN reductase (EC 1.5.1.29)
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1850: FMN reductase (EC 1.5.1.29)
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1423: FMN reductase (EC 1.5.1.29)
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1545: FMN reductase (EC 1.5.1.29)
FMN reductase (EC 1.5.1.29)
 
CRON 3.
cg3084
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129
*
Corynebacterium efficiens YS-314

Site:
position = -8
score = 5.92845
sequence = TTGTTGACATGACAACAA

Gene: CE2614: oxidoreductase
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -8
score = 6.36669
sequence = TTGTTGATATGTCAACAA

Gene: cg3084: oxidoreductase
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0259: oxidoreductase
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0259: oxidoreductase
oxidoreductase
cg3085
 
Corynebacterium amycolatum SK46
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -34
score = 6.05484
sequence = TTGTTGATATGTCACCAA

Gene: cauri_0737: putative alkanal monooxygenase alpha chain
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314

Gene: CE2620: putative alkanal monooxygenase alpha chain
 
Corynebacterium glutamicum ATCC 13032

Gene: cg3085: putative alkanal monooxygenase alpha chain
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
putative alkanal monooxygenase alpha chain
 
CRON 4.
cg2329
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129
*
Corynebacterium efficiens YS-314

Site:
position = -56
score = 5.96874
sequence = TTGTTGATATATCCACAA

Gene: CE2021: putative oxidoreductase
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -57
score = 5.89041
sequence = TTGTTGATATATCTACAA

Gene: cg2329: putative oxidoreductase
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
putative oxidoreductase
 
CRON 5.
msrA
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0128: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2405: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP2260: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Corynebacterium efficiens YS-314

Site:
position = -127
score = 5.2552
sequence = TTGTTGATAAAGCAACGA

Gene: CE2764: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -133
score = 5.31275
sequence = TTGTTGATATTGCAACGA

Gene: cg3236: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
 
Corynebacterium jeikeium K411

Gene: jk0110: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0108: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0121: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
 
CRON 6.
sodA
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_2076: Superoxide dismutase (EC 1.15.1.1)
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2406: Superoxide dismutase (EC 1.15.1.1)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP2261: Superoxide dismutase (EC 1.15.1.1)
*
Corynebacterium efficiens YS-314

Site:
position = -98
score = 5.11203
sequence = TCGTTGCTTTATCAACAA

Gene: CE2765: Superoxide dismutase (EC 1.15.1.1)
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -131
score = 5.17431
sequence = TCGTTGCAATATCAACAA

Gene: cg3237: Superoxide dismutase (EC 1.15.1.1)
 
Corynebacterium jeikeium K411

Gene: jk0112: Superoxide dismutase (EC 1.15.1.1)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0110: Superoxide dismutase (EC 1.15.1.1)
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0122: Superoxide dismutase (EC 1.15.1.1)
Superoxide dismutase (EC 1.15.1.1)
 
CRON 7.
rosR
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0627: Peroxide stress response transcriptional regulator RosR, MarR family
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1035: Peroxide stress response transcriptional regulator RosR, MarR family
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1028: Peroxide stress response transcriptional regulator RosR, MarR family
*
Corynebacterium efficiens YS-314

Site:
position = -170
score = 5.70247
sequence = TTGATGATGCGTCAACAA

Gene: CE1273: Peroxide stress response transcriptional regulator RosR, MarR family
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -169
score = 5.86459
sequence = TTGATGATGTGTCAACAA

Gene: cg1324: Peroxide stress response transcriptional regulator RosR, MarR family
*
Corynebacterium jeikeium K411

Site:
position = -46
score = 5.64481
sequence = TAGTTGATGTATCAACTA

Gene: jk2061: Peroxide stress response transcriptional regulator RosR, MarR family
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -176
score = 5.33095
sequence = TTTATGATACATCAACTA

Gene: ckrop_0692: Peroxide stress response transcriptional regulator RosR, MarR family
*
Corynebacterium urealyticum DSM 7109

Site:
position = -46
score = 5.35485
sequence = TAGGTGATGTGTCAACTA

Gene: cur_1983: Peroxide stress response transcriptional regulator RosR, MarR family
Peroxide stress response transcriptional regulator RosR, MarR family
 
CRON 8.
cg1322
*
Corynebacterium amycolatum SK46

Site:
position = -89
score = 5.75978
sequence = TTGTTGACACGTCAACAC

Site:
position = -118
score = 5.45961
sequence = TTGTTGACACATCACCAC

Gene: CORAM0001_1635: Predicted polyisoprenoid-binding protein
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -49
score = 5.688
sequence = TTGTTGTCACGTCAACAA

Gene: cauri_2527: Predicted polyisoprenoid-binding protein
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -147
score = 5.10726
sequence = TTGTTGACACGTCAATTG

Gene: DIP1027: Predicted polyisoprenoid-binding protein
*
Corynebacterium efficiens YS-314

Site:
position = 9
score = 5.74913
sequence = TTGTTGACGCATCATCAA

Gene: CE1272: Predicted polyisoprenoid-binding protein
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -127
score = 5.97296
sequence = TTGTTGACACATCATCAA

Gene: cg1322: Predicted polyisoprenoid-binding protein
*
Corynebacterium jeikeium K411

Site:
position = -88
score = 5.70653
sequence = TAGTTGATACATCAACTA

Gene: jk2060: Predicted polyisoprenoid-binding protein
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -64
score = 5.02796
sequence = TAGTTGATGTGTCACATA

Gene: ckrop_0391: Predicted polyisoprenoid-binding protein
*
Corynebacterium urealyticum DSM 7109

Site:
position = -27
score = 5.35951
sequence = TAGTTGACACATCACCTA

Gene: cur_1982: Predicted polyisoprenoid-binding protein
Predicted polyisoprenoid-binding protein
 
CRON 9.
narK
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP0501: Nitrate/nitrite transporter
 
Corynebacterium efficiens YS-314

Gene: CE1297: Nitrate/nitrite transporter
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -191
score = 4.26803
sequence = ATGTTGATATAAGCACAA

Gene: cg1345: Nitrate/nitrite transporter
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Nitrate/nitrite transporter
narG
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP0500: Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
 
Corynebacterium efficiens YS-314

Gene: CE1296: Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1344: Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
narH
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP0499: Respiratory nitrate reductase beta chain (EC 1.7.99.4)
 
Corynebacterium efficiens YS-314

Gene: CE1295: Respiratory nitrate reductase beta chain (EC 1.7.99.4)
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1343: Respiratory nitrate reductase beta chain (EC 1.7.99.4)
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Respiratory nitrate reductase beta chain (EC 1.7.99.4)
narJ
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP0498: Respiratory nitrate reductase delta chain (EC 1.7.99.4)
 
Corynebacterium efficiens YS-314

Gene: CE1294: Respiratory nitrate reductase delta chain (EC 1.7.99.4)
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1342: Respiratory nitrate reductase delta chain (EC 1.7.99.4)
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Respiratory nitrate reductase delta chain (EC 1.7.99.4)
narI
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP0497: Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
 
Corynebacterium efficiens YS-314

Gene: CE1293: Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1341: Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
 
CRON 10.
cg1150
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -42
score = 5.47912
sequence = TTGTTGATACATCAACTT

Gene: cg1150: Hypothetical protein
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Hypothetical protein
 
CRON 11.
poxB
*
Corynebacterium amycolatum SK46

Site:
position = -38
score = 4.33035
sequence = ATGTTGACGTAGCGACTA

Gene: CORAM0001_0264: Pyruvate oxidase (EC 1.2.2.2)
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -116
score = 3.99095
sequence = TTGTTGTTAAAGTCACAA

Gene: cauri_2195: Pyruvate oxidase (EC 1.2.2.2)
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -395
score = 3.619
sequence = TTGAGGTCATATCCACGT

Gene: DIP1952: Pyruvate oxidase (EC 1.2.2.2)
 
Corynebacterium efficiens YS-314
 
Corynebacterium glutamicum ATCC 13032

Gene: cg2891: Pyruvate oxidase (EC 1.2.2.2)
*
Corynebacterium jeikeium K411

Site:
position = -8
score = 3.73869
sequence = TTGGAGGCATGGCTAAAA

Gene: jk0715: Pyruvate oxidase (EC 1.2.2.2)
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -202
score = 5.25002
sequence = TAGTTGATGTATCATAAA

Gene: ckrop_0693: Pyruvate oxidase (EC 1.2.2.2)
 
Corynebacterium urealyticum DSM 7109
Pyruvate oxidase (EC 1.2.2.2)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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