Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog LexA - Corynebacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 109 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Corynebacterium glutamicum ATCC 13032 39 30
Corynebacterium efficiens YS-314 23 16
Corynebacterium diphtheriae NCTC 13129 13 9
Corynebacterium jeikeium K411 13 8
Corynebacterium urealyticum DSM 7109 11 7
Corynebacterium aurimucosum ATCC 700975 12 8
Corynebacterium amycolatum SK46 19 11
Corynebacterium kroppenstedtii DSM 44385 11 7
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
divS
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -85
score = 4.34413
sequence = TCGAACATGTGAACGG

Site:
position = -165
score = 4.57825
sequence = TGGTACGAGTGTTCGA

Gene: cg2113: SOS-inducible cell-division suppressor
*
Corynebacterium efficiens YS-314

Site:
position = -107
score = 4.57825
sequence = TGGTACGAGTGTTCGA

Site:
position = -28
score = 4.9678
sequence = TCGAACATGTGAACGA

Gene: CE1822: SOS-inducible cell-division suppressor
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -87
score = 4.7026
sequence = TCGAACATGTTGTCGA

Gene: DIP1425: SOS-inducible cell-division suppressor
 
Corynebacterium jeikeium K411
*
Corynebacterium urealyticum DSM 7109

Site:
position = -145
score = 4.75301
sequence = TAGAACACCCGTTCGA

Site:
position = -180
score = 5.11295
sequence = TCGAACGTGCGTGCTA

Gene: cur_0885: SOS-inducible cell-division suppressor
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -180
score = 4.39676
sequence = AGGAAAAAATGTTCGA

Site:
position = -100
score = 4.74272
sequence = TCGAACGGTTGGTCGA

Gene: cauri_1476: SOS-inducible cell-division suppressor
 
Corynebacterium amycolatum SK46
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -52
score = 4.04094
sequence = GGGATGAGATGTTCGA

Gene: ckrop_2122: SOS-inducible cell-division suppressor
SOS-inducible cell-division suppressor
 
CRON 2.
putP
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -259
score = 4.07478
sequence = TCGTAACCTTGTGCGA

Gene: cg1314: Sodium/proline symporter
*
Corynebacterium efficiens YS-314

Site:
position = -300
score = 4.19587
sequence = TCGTATCCATGTGCGA

Gene: CE1262: Sodium/proline symporter
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1022: Sodium/proline symporter
 
Corynebacterium jeikeium K411

Gene: jk1363: Sodium/proline symporter
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0687: Sodium/proline symporter
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1030: Sodium/proline symporter
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0622: Sodium/proline symporter
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -252
score = 5.18758
sequence = TCGAACATATTTTCGA

Gene: ckrop_1307: Sodium/proline symporter
Sodium/proline symporter
 
CRON 3.
ruvC
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -104
score = 4.15799
sequence = TCGCAATTGTGTGCTA

Gene: cg1871: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
*
Corynebacterium efficiens YS-314

Site:
position = -37
score = 4.08208
sequence = TCGCAATTATGTGCTA

Gene: CE1775: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -123
score = 4.08208
sequence = TCGCAATTATGTGCTA

Gene: DIP1377: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
*
Corynebacterium jeikeium K411

Site:
position = -30
score = 4.65902
sequence = TAAAACACGTGTGCTA

Gene: jk1056: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
*
Corynebacterium urealyticum DSM 7109

Site:
position = -52
score = 5.22688
sequence = TCGATCATGTGTGCTA

Gene: cur_0934: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -10
score = 4.38823
sequence = TAGAACACATGTGTGT

Gene: cauri_1419: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
*
Corynebacterium amycolatum SK46

Site:
position = -63
score = 4.08998
sequence = ACAAACAGCTGTTCGA

Gene: CORAM0001_2122: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1031: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
ruvA
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1870: Holliday junction DNA helicase (EC 3.6.4.12) motor protein
 
Corynebacterium efficiens YS-314

Gene: CE1774: Holliday junction DNA helicase (EC 3.6.4.12) motor protein
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1376: Holliday junction DNA helicase (EC 3.6.4.12) motor protein
 
Corynebacterium jeikeium K411

Gene: jk1055: Holliday junction DNA helicase (EC 3.6.4.12) motor protein
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0935: Holliday junction DNA helicase (EC 3.6.4.12) motor protein
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1418: Holliday junction DNA helicase (EC 3.6.4.12) motor protein
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_2123: Holliday junction DNA helicase (EC 3.6.4.12) motor protein
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1030: Holliday junction DNA helicase (EC 3.6.4.12) motor protein
Holliday junction DNA helicase RuvA (EC 3.6.4.12)
ruvB
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1869: holliday junction DNA helicase RuvB (EC 3.6.4.12)
 
Corynebacterium efficiens YS-314

Gene: CE1773: holliday junction DNA helicase RuvB (EC 3.6.4.12)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1375: holliday junction DNA helicase RuvB (EC 3.6.4.12)
 
Corynebacterium jeikeium K411

Gene: jk1054: holliday junction DNA helicase RuvB (EC 3.6.4.12)
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0936: holliday junction DNA helicase RuvB (EC 3.6.4.12)
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1417: holliday junction DNA helicase RuvB (EC 3.6.4.12)
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_2124: holliday junction DNA helicase RuvB (EC 3.6.4.12)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1029: holliday junction DNA helicase RuvB (EC 3.6.4.12)
holliday junction DNA helicase RuvB (EC 3.6.4.12)
 
CRON 4.
cg1427
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -63
score = 4.49833
sequence = TTGAACAAATGTTCGG

Gene: cg1427: hypothetical protein
*
Corynebacterium efficiens YS-314

Site:
position = -128
score = 4.09629
sequence = CTGAACATATATTCGA

Gene: CE1360: hypothetical protein
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2080: putative secreted protein
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
Conserved hypothetical protein
Cg1429
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1429: conserved hypothetical protein
 
Corynebacterium efficiens YS-314

Gene: CE1361: conserved hypothetical protein
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1123: conserved hypothetical protein
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0691: conserved hypothetical protein
 
Corynebacterium kroppenstedtii DSM 44385
conserved hypothetical protein
 
CRON 5.
cg1884
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -297
score = 4.26171
sequence = TCGCACATTTTTTCTA

Gene: cg1884: Conserved hypothetical protein
 
Corynebacterium efficiens YS-314

Gene: CE1788: Conserved hypothetical protein
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
Conserved hypothetical protein
 
CRON 6.
cg2026
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -102
score = 4.13038
sequence = TAGCACATATTTTCTA

Gene: cg2026: Hypothetical protein
 
Corynebacterium efficiens YS-314
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
Hypothetical protein
 
CRON 7.
cg0875
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -37
score = 4.66864
sequence = TAGAACATATGTACCA

Gene: cg0875: Conserved hypothetical protein
*
Corynebacterium efficiens YS-314

Site:
position = -41
score = 4.13273
sequence = TAGAACATACGTACAA

Gene: CE0781: Conserved hypothetical protein
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
Conserved hypothetical protein
 
CRON 8.
cg0841
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -87
score = 4.01524
sequence = TCGAAAGTATTTCCGA

Gene: cg0841: Hypothetical protein
 
Corynebacterium efficiens YS-314
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
Hypothetical protein
 
CRON 9.
cg0742
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -100
score = 3.69412
sequence = TCAAGCACCCGTTCGA

Gene: cg0742: Hypothetical protein
 
Corynebacterium efficiens YS-314

Gene: CE0652: Hypothetical protein
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
Hypothetical protein
 
CRON 10.
cg0834
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -62
score = 3.69143
sequence = ACACAAACGTGTTCGA

Gene: cg0834: Predicted ABC transporter, substrate binding protein
 
Corynebacterium efficiens YS-314

Gene: CE0751: Predicted ABC transporter, substrate binding protein
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0461: Predicted ABC transporter, substrate binding protein
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_0569: Predicted ABC transporter, substrate binding protein
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
Predicted ABC transporter, substrate binding protein
 
CRON 11.
ftsK
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -68
score = 4.07559
sequence = TAGAAAACTTGGACGA

Gene: cg2158: cell division protein, required for cell division and chromosomepartitioning
 
Corynebacterium efficiens YS-314

Gene: CE1861: cell division protein, required for cell division and chromosomepartitioning
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1461: cell division protein, required for cell division and chromosomepartitioning
 
Corynebacterium jeikeium K411

Gene: jk1126: cell division protein, required for cell division and chromosomepartitioning
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1512: cell division protein, required for cell division and chromosomepartitioning
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0828: cell division protein, required for cell division and chromosomepartitioning
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1122: cell division protein, required for cell division and chromosomepartitioning
cell division protein, required for cell division and chromosomepartitioning
 
CRON 12.
cg2034
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -22
score = 3.97968
sequence = CCGATCAAATGTTTGA

Gene: cg2034: Hypothetical protein
 
Corynebacterium efficiens YS-314
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
Hypothetical protein
 
CRON 13.
cg1080
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -30
score = 3.83787
sequence = ATGAAAATTTGTTTGA

Gene: cg1080: Predicted multicopper oxidase
*
Corynebacterium efficiens YS-314

Site:
position = -200
score = 3.84974
sequence = TGGAACCGATGATCCA

Gene: CE1018: Predicted multicopper oxidase
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_0896: Predicted multicopper oxidase
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
Predicted multicopper oxidase
 
CRON 14.
cg2733
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -88
score = 4.90921
sequence = TCGAATAACTGTTCGA

Gene: cg2733: HNH nuclease
 
Corynebacterium efficiens YS-314
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
HNH nuclease
 
CRON 15.
cg0470
*2
Corynebacterium glutamicum ATCC 13032

Site:
position = -201
score = 5.33332
sequence = TGGAAAATATGTTCGA

Gene: cg0470: Hypothetical protein

Gene: cg0471: Hypothetical protein
 
Corynebacterium efficiens YS-314
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
Hypothetical protein
 
CRON 16.
blt
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -79
score = 5.08001
sequence = TCGATAATATGTTCTA

Gene: cg1288: Predicted permease
*
Corynebacterium efficiens YS-314

Site:
position = -80
score = 4.68663
sequence = TAGAAAACATGTTTGA

Gene: CE1207: Predicted permease
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0340: Predicted permease
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -50
score = 4.49934
sequence = TAGAACTATTGTTCGA

Gene: cauri_1016: Predicted permease
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0617: Predicted permease
 
Corynebacterium kroppenstedtii DSM 44385
Predicted permease
cg1289
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1289: Predicted multidrug resistance protein
 
Corynebacterium efficiens YS-314

Gene: CE1208: Predicted multidrug resistance protein
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
Predicted multidrug resistance protein
modC
 
Corynebacterium glutamicum ATCC 13032
 
Corynebacterium efficiens YS-314
 
Corynebacterium diphtheriae NCTC 13129
*
Corynebacterium jeikeium K411

Site:
position = -125
score = 4.66234
sequence = TAGAGCATATGTTCTA

Gene: jk1858: Modification methylase NgoMIV (EC 2.1.1.37)
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975
*
Corynebacterium amycolatum SK46

Site:
position = -101
score = 5.1848
sequence = TCGAATGGATGTTCGA

Gene: CORAM0001_0615: Modification methylase NgoMIV (EC 2.1.1.37)
 
Corynebacterium kroppenstedtii DSM 44385
Modification methylase NgoMIV (EC 2.1.1.37)
 
CRON 17.
cg1255
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -68
score = 5.27626
sequence = TCGAATAAATGTTCGA

Gene: cg1255: HNH endonuclease
 
Corynebacterium efficiens YS-314
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
HNH endonuclease
 
CRON 18.
radA
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -48
score = 3.49431
sequence = TCGAACACCGTTTCTC

Gene: cg2950: DNA repair protein RadA
*
Corynebacterium efficiens YS-314

Site:
position = -35
score = 4.38283
sequence = TCGAACATGTTTTTGT

Gene: CE2524: DNA repair protein RadA
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1977: DNA repair protein RadA
 
Corynebacterium jeikeium K411

Gene: jk0305: DNA repair protein RadA
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1678: DNA repair protein RadA
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2218: DNA repair protein RadA
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_1258: DNA repair protein RadA
 
Corynebacterium kroppenstedtii DSM 44385
DNA repair protein RadA
 
CRON 19.
uvrA
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -66
score = 4.52969
sequence = TCGATGCTATGTTCGA

Gene: cg1560: Excinuclease ABC, subunit A
*
Corynebacterium efficiens YS-314

Site:
position = -76
score = 4.25997
sequence = TCGTTGGTATGTTCGA

Gene: CE1507: Excinuclease ABC, subunit A
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -145
score = 4.32049
sequence = TCGGTAGTATGTTCGA

Gene: DIP1159: Excinuclease ABC, subunit A
 
Corynebacterium jeikeium K411

Gene: jk0832: Excinuclease ABC, subunit A
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1125: Excinuclease ABC, subunit A
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1362: Excinuclease ABC, subunit A
*
Corynebacterium amycolatum SK46

Site:
position = -79
score = 4.47588
sequence = CTGAACACATGTGCGA

Gene: CORAM0001_1690: Excinuclease ABC, subunit A
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0827: Excinuclease ABC, subunit A
Excinuclease ABC, subunit A
 
CRON 20.
cg0713
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -40
score = 5.48827
sequence = TGGAACAGGTGTTCGA

Gene: cg0713: Conserved hypothetical protein
*
Corynebacterium efficiens YS-314

Site:
position = 5
score = 5.35437
sequence = TGGAACACATGTTCTA

Gene: CE0627: Conserved hypothetical protein
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP0603: Conserved hypothetical protein
*
Corynebacterium jeikeium K411

Site:
position = -99
score = 5.40609
sequence = TAGAACACGTGTTCTA

Gene: jk1717: Conserved hypothetical protein
*
Corynebacterium urealyticum DSM 7109

Site:
position = -165
score = 5.07077
sequence = TAGAACACCTGTTCGA

Gene: cur_0403: Conserved hypothetical protein
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -16
score = 4.81487
sequence = TCAAACAGGTGTTCGT

Gene: cauri_0492: Conserved hypothetical protein
*
Corynebacterium amycolatum SK46

Site:
position = -89
score = 5.03705
sequence = TCGAACGTACGTGCTA

Gene: CORAM0001_0278: Conserved hypothetical protein
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0326: Conserved hypothetical protein
Conserved hypothetical protein
dinP
 
Corynebacterium glutamicum ATCC 13032

Gene: cg0714: DNA polymerase IV
 
Corynebacterium efficiens YS-314

Gene: CE0628: DNA polymerase IV
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP0604: DNA polymerase IV
 
Corynebacterium jeikeium K411

Gene: jk1716: DNA polymerase IV
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0404: DNA polymerase IV
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_0493: DNA polymerase IV
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0279: DNA polymerase IV
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0327: DNA polymerase IV
DNA polymerase IV
 
CRON 21.
recA
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -240
score = 4.98122
sequence = TCGAACAGTTGTGCGT

Gene: cg2141: Recombination protein RecA
*
Corynebacterium efficiens YS-314

Site:
position = -213
score = 4.98122
sequence = TCGAACAGTTGTGCGT

Gene: CE1849: Recombination protein RecA
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -204
score = 4.89414
sequence = TCGAACATGTATTCGT

Gene: DIP1450: Recombination protein RecA
*
Corynebacterium jeikeium K411

Site:
position = -175
score = 4.56899
sequence = TCGAACAAAGGTTCGT

Gene: jk1116: Recombination protein RecA
*
Corynebacterium urealyticum DSM 7109

Site:
position = -307
score = 4.56899
sequence = TCGAACAAAGGTTCGT

Gene: cur_0874: Recombination protein RecA
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -211
score = 4.51957
sequence = TCGAACACTTGTGTGT

Gene: cauri_1500: Recombination protein RecA
*
Corynebacterium amycolatum SK46

Site:
position = -140
score = 3.99527
sequence = TCGAACAGGGTTTCGC

Gene: CORAM0001_0838: Recombination protein RecA
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -245
score = 4.53453
sequence = TCGAACATACGTTTGC

Gene: ckrop_1113: Recombination protein RecA
Recombination protein RecA
recX
 
Corynebacterium glutamicum ATCC 13032

Gene: cg2140: Recombination regulator RecX
 
Corynebacterium efficiens YS-314

Gene: CE1848: Recombination regulator RecX
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1449: Recombination regulator RecX
 
Corynebacterium jeikeium K411

Gene: jk1115: Recombination regulator RecX
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0875: Recombination regulator RecX
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1499: Recombination regulator RecX
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0839: Recombination regulator RecX
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1111: Recombination regulator RecX
Recombination regulator RecX
 
CRON 22.
recN
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -49
score = 4.22238
sequence = TAGAAAAAACGTTCGC

Gene: cg1602: DNA repair protein RecN
*
Corynebacterium efficiens YS-314

Site:
position = -107
score = 4.60135
sequence = TCGGATGTGTGTGCGA

Gene: CE1548: DNA repair protein RecN
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -47
score = 4.21556
sequence = TAGAACACCTGTTCCT

Gene: DIP1182: DNA repair protein RecN
 
Corynebacterium jeikeium K411

Gene: jk0866: DNA repair protein RecN
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1095: DNA repair protein RecN
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1331: DNA repair protein RecN
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_1929: DNA repair protein RecN
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0852: DNA repair protein RecN
DNA repair protein RecN
 
CRON 23.
dnaE2
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -19
score = 5.05873
sequence = TGGAAAATTTGTTCTA

Gene: cg0738: Error-prone DNA polymerase
*
Corynebacterium efficiens YS-314

Site:
position = -26
score = 4.72448
sequence = TGGAAAGAATGTTCTA

Gene: CE0632: Error-prone DNA polymerase
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -32
score = 4.23326
sequence = GTGAACATGTGTGTGA

Gene: DIP0612: Error-prone DNA polymerase
*
Corynebacterium jeikeium K411

Site:
position = -8
score = 5.23154
sequence = TAGAATATGTGTTCTA

Gene: jk1709: Error-prone DNA polymerase
*
Corynebacterium urealyticum DSM 7109

Site:
position = -36
score = 5.4007
sequence = TCGAATAGATGTTCGA

Gene: cur_0412: Error-prone DNA polymerase
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -33
score = 5.17628
sequence = TGGAATACATGTTCGA

Gene: cauri_0500: Error-prone DNA polymerase
*
Corynebacterium amycolatum SK46

Site:
position = -49
score = 4.77833
sequence = TCGAAAATACGTTTGA

Gene: CORAM0001_0285: Error-prone DNA polymerase
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -191
score = 4.99207
sequence = TCGAACACGCGTACTA

Gene: ckrop_0333: Error-prone DNA polymerase
Error-prone DNA polymerase
 
CRON 24.
helZ
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1316: SNF2 family DNA/RNA helicase
 
Corynebacterium efficiens YS-314

Gene: CE1263: SNF2 family DNA/RNA helicase
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1023: SNF2 family DNA/RNA helicase
 
Corynebacterium jeikeium K411

Gene: jk1362: SNF2 family DNA/RNA helicase
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0688: SNF2 family DNA/RNA helicase
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1031: SNF2 family DNA/RNA helicase
*
Corynebacterium amycolatum SK46

Site:
position = -141
score = 5.21766
sequence = TCGAACACGCGTGCTA

Gene: CORAM0001_0623: SNF2 family DNA/RNA helicase
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -117
score = 5.6074
sequence = TCGAAAATATGTTCGA

Gene: ckrop_1305: SNF2 family DNA/RNA helicase
SNF2 family DNA/RNA helicase
cg1317
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1317: SWF/SNF family helicase
 
Corynebacterium efficiens YS-314

Gene: CE1264: SWF/SNF family helicase
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1024: SWF/SNF family helicase
 
Corynebacterium jeikeium K411

Gene: jk1361: SWF/SNF family helicase
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0689: SWF/SNF family helicase
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1032: SWF/SNF family helicase
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0624: SWF/SNF family helicase
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1304: SWF/SNF family helicase
SWF/SNF family helicase
sbcD
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -117
score = 4.63077
sequence = TTGAAGATATGTACGA

Gene: cg1318: DNA repair exonuclease SbcD
*
Corynebacterium efficiens YS-314

Site:
position = -140
score = 4.0319
sequence = TGGAACAGTTGCGCGC

Gene: CE1265: DNA repair exonuclease SbcD
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -72
score = 4.05565
sequence = TCGAAGACATCTACTA

Gene: DIP1025: DNA repair exonuclease SbcD
*
Corynebacterium jeikeium K411

Site:
position = -122
score = 5.05684
sequence = TCGAACCTTTGTTCTA

Gene: jk1360: DNA repair exonuclease SbcD
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0690: DNA repair exonuclease SbcD
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1033: DNA repair exonuclease SbcD
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0625: DNA repair exonuclease SbcD
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1303: DNA repair exonuclease SbcD
DNA repair exonuclease SbcD
sbcC
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1319: ATPase involved in DNA repair
 
Corynebacterium efficiens YS-314

Gene: CE1266: ATPase involved in DNA repair
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1026: ATPase involved in DNA repair
 
Corynebacterium jeikeium K411

Gene: jk1359: ATPase involved in DNA repair
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0691: ATPase involved in DNA repair
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1034: ATPase involved in DNA repair
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0626: ATPase involved in DNA repair
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1302: ATPase involved in DNA repair
ATPase involved in DNA repair
 
CRON 25.
cg2381
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -122
score = 5.05933
sequence = TCAAATATGTGTTCGA

Gene: cg2381: Conserved hypothetical protein
*
Corynebacterium efficiens YS-314

Site:
position = -6
score = 5.06149
sequence = TAGAAAGTGTGTTCTA

Gene: CE2064: Conserved hypothetical protein
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = 31
score = 4.75838
sequence = TCGAACAAACGTTCCA

Gene: DIP1609: Conserved hypothetical protein
*
Corynebacterium jeikeium K411

Site:
position = -111
score = 5.54147
sequence = TGGAACATGTGTTCTA

Gene: jk0739: Conserved hypothetical protein
*
Corynebacterium urealyticum DSM 7109

Site:
position = -88
score = 5.51374
sequence = TAGAACACGTGTTCGA

Gene: cur_1216: Conserved hypothetical protein
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -145
score = 4.70051
sequence = TCGAACACCTGCTCTA

Gene: cauri_1681: Conserved hypothetical protein
*
Corynebacterium amycolatum SK46

Site:
position = -123
score = 5.5175
sequence = TCGAACAGATGTGCGA

Gene: CORAM0001_1116: Conserved hypothetical protein
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -179
score = 4.93789
sequence = TCGAATATAAGTTCGA

Gene: ckrop_0735: Conserved hypothetical protein
Conserved hypothetical protein
 
CRON 26.
lexA
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -270
score = 4.0954
sequence = CCGTTCACATGTTCGA

Site:
position = -190
score = 4.37101
sequence = TCGAACACTCGTACCA

Gene: cg2114: SOS-response repressor LexA
*
Corynebacterium efficiens YS-314

Site:
position = -130
score = 4.37101
sequence = TCGAACACTCGTACCA

Site:
position = -209
score = 4.74667
sequence = TCGTTCACATGTTCGA

Gene: CE1823: SOS-response repressor LexA
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -268
score = 4.85373
sequence = TCGACAACATGTTCGA

Gene: DIP1426: SOS-response repressor LexA
*
Corynebacterium jeikeium K411

Site:
position = -164
score = 4.98634
sequence = TAGATCACGTGTTCTA

Site:
position = -126
score = 4.40372
sequence = TAGCACGCTTGTTCGA

Site:
position = -84
score = 4.57421
sequence = TCGAACACATATACTA

Gene: jk1106: SOS-response repressor LexA
*
Corynebacterium urealyticum DSM 7109

Site:
position = -103
score = 5.4388
sequence = TCGAACGGGTGTTCTA

Site:
position = -68
score = 4.25289
sequence = TAGCACGCACGTTCGA

Gene: cur_0884: SOS-response repressor LexA
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -124
score = 4.16543
sequence = TCGAACATTTTTTCCT

Site:
position = -204
score = 4.23471
sequence = TCGACCAACCGTTCGA

Gene: cauri_1477: SOS-response repressor LexA
*
Corynebacterium amycolatum SK46

Site:
position = -227
score = 4.40092
sequence = TCAAACGACTGTTCGA

Gene: CORAM0001_0857: SOS-response repressor LexA
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -213
score = 3.95076
sequence = TCGAACATGTGCGATC

Gene: ckrop_1088: SOS-response repressor LexA
SOS-response repressor LexA
 
CRON 27.
pdxS
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -76
score = 4.15136
sequence = TCAAAAAAGTGGTCTA

Gene: cg0898: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
 
Corynebacterium efficiens YS-314
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP0227: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
 
Corynebacterium jeikeium K411

Gene: jk1060: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_0520: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_2117: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1034: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
pdxT
 
Corynebacterium glutamicum ATCC 13032

Gene: cg0899: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
Corynebacterium efficiens YS-314
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP0228: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
Corynebacterium jeikeium K411

Gene: jk1058: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_0521: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_2119: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1033: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
CRON 28.
cg2683
*3
Corynebacterium glutamicum ATCC 13032

Site:
position = -103
score = 4.40085
sequence = TTGAATAAGTGTTTGA

Site:
position = -72
score = 4.11393
sequence = TCGAAAGTGTGAGCGG

Gene: cg1059: Conserved hypothetical protein

Site:
position = -69
score = 4.25592
sequence = TCGAAAATTTGATCGG

Site:
position = -121
score = 4.19838
sequence = TCGAACATGTGAGTGC

Gene: cg2504: Conserved hypothetical protein

Site:
position = -58
score = 4.45853
sequence = TCGAACACGTGAGCGG

Gene: cg2683: Conserved hypothetical protein
 
Corynebacterium efficiens YS-314
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium aurimucosum ATCC 700975
*2
Corynebacterium amycolatum SK46

Site:
position = -89
score = 5.09177
sequence = TCGAATGGGTGTGCGA

Gene: CORAM0001_0220: Conserved hypothetical protein

Site:
position = -134
score = 4.04717
sequence = TCGGAAAAAAGTTCGA

Site:
position = -91
score = 4.86618
sequence = TCGAATGGGTGTACGA

Gene: CORAM0001_1381: Conserved hypothetical protein
 
Corynebacterium kroppenstedtii DSM 44385
Conserved hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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