Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog FMN - Chlorobiales

Properties
Regulator type: RNA regulatory element
Name: FMN
RFAM: RF00050
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Phylum: Chlorobiales
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Chloroherpeton thalassium ATCC 35110 1 1
Pelodictyon phaeoclathratiforme BU-1
Chlorobium ferrooxidans DSM 13031
Chlorobium phaeobacteroides DSM 266
Chlorobium limicola DSM 245 1 1
Prosthecochloris vibrioformis DSM 265
Pelodictyon luteolum DSM 273
Chlorobaculum parvum NCIB 8327
Chlorobium phaeobacteroides BS1
Prosthecochloris aestuarii DSM 271
Chlorobium chlorochromatii CaD3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ribB
*
Chloroherpeton thalassium ATCC 35110

Site:
position = -249
score = 109.97
sequence = AACTTGTTCTCAGGG...

Gene: Ctha_0748: 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)
 
Pelodictyon phaeoclathratiforme BU-1
 
Chlorobium ferrooxidans DSM 13031
 
Chlorobium phaeobacteroides DSM 266
*
Chlorobium limicola DSM 245

Site:
position = -206
score = 101.78
sequence = TTGTTTCTCAGGGCG...

Gene: Clim_0178: 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)
 
Prosthecochloris vibrioformis DSM 265
 
Pelodictyon luteolum DSM 273
 
Chlorobaculum parvum NCIB 8327
 
Chlorobium phaeobacteroides BS1
 
Prosthecochloris aestuarii DSM 271
 
Chlorobium chlorochromatii CaD3
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD