Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog GlnR - Lactobacillaceae

Properties
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 32 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Lactobacillus acidophilus NCFM
Lactobacillus brevis ATCC 367 7 3
Lactobacillus casei ATCC 334 6 4
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Lactobacillus fermentum IFO 3956
Lactobacillus helveticus DPC 4571
Lactobacillus johnsonii NCC 533
Lactobacillus plantarum WCFS1 6 4
Lactobacillus reuteri JCM 1112
Lactobacillus rhamnosus GG 6 4
Lactobacillus sakei subsp. sakei 23K 2 1
Lactobacillus salivarius subsp. salivarius UCC118 10 5
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 8 4
Oenococcus oeni PSU-1 3 2
Pediococcus pentosaceus ATCC 25745 4 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
gluQ
 
Lactobacillus acidophilus NCFM

Gene: LBA0578: Glutamate ABC transporter, ATP-binding protein
*
Lactobacillus brevis ATCC 367

Site:
position = -260
score = 5.70621
sequence = GTGTTAGAATTTATAACAT

Gene: LVIS_1775: Glutamate ABC transporter, ATP-binding protein
 
Lactobacillus casei ATCC 334

Gene: LSEI_2022: Glutamate ABC transporter, ATP-binding protein
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Gene: LBUL_0458: Glutamate ABC transporter, ATP-binding protein
 
Lactobacillus fermentum IFO 3956
 
Lactobacillus helveticus DPC 4571

Gene: lhv_0598: Glutamate ABC transporter, ATP-binding protein
 
Lactobacillus johnsonii NCC 533

Gene: LJ0753: Glutamate ABC transporter, ATP-binding protein
 
Lactobacillus plantarum WCFS1

Gene: lp_0878: Glutamate ABC transporter, ATP-binding protein
 
Lactobacillus reuteri JCM 1112

Gene: LAR_1420: Glutamate ABC transporter, ATP-binding protein
 
Lactobacillus rhamnosus GG

Gene: LGG_02009: Glutamate ABC transporter, ATP-binding protein
 
Lactobacillus sakei subsp. sakei 23K
*
Lactobacillus salivarius subsp. salivarius UCC118

Site:
position = -201
score = 5.42781
sequence = TTGTTAGATTTTCTAACAA

Site:
position = -161
score = 4.75879
sequence = ATGTAACCTAATATAACAT

Gene: LSL_1446: Glutamate ABC transporter, ATP-binding protein
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Site:
position = -152
score = 5.58795
sequence = TTGTTATAAAACCTCACAT

Gene: LEUM_1936: Glutamate ABC transporter, ATP-binding protein
 
Oenococcus oeni PSU-1

Gene: OEOE_1634: Glutamate ABC transporter, ATP-binding protein
 
Pediococcus pentosaceus ATCC 25745

Gene: PEPE_0389: Glutamate ABC transporter, ATP-binding protein
Glutamate ABC transporter, ATP-binding protein
gluH
 
Lactobacillus acidophilus NCFM

Gene: LBA0579: Glutamate ABC transporter, substrate-binding protein
 
Lactobacillus brevis ATCC 367

Gene: LVIS_1774: Glutamate ABC transporter, substrate-binding protein
 
Lactobacillus casei ATCC 334

Gene: LSEI_2021: Glutamate ABC transporter, substrate-binding protein
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Gene: LBUL_0459: Glutamate ABC transporter, substrate-binding protein
 
Lactobacillus fermentum IFO 3956
 
Lactobacillus helveticus DPC 4571

Gene: lhv_0599: Glutamate ABC transporter, substrate-binding protein
 
Lactobacillus johnsonii NCC 533

Gene: LJ0754: Glutamate ABC transporter, substrate-binding protein
 
Lactobacillus plantarum WCFS1

Gene: lp_0881: Glutamate ABC transporter, substrate-binding protein
 
Lactobacillus reuteri JCM 1112

Gene: LAR_1421: Glutamate ABC transporter, substrate-binding protein
 
Lactobacillus rhamnosus GG

Gene: LGG_02008: Glutamate ABC transporter, substrate-binding protein
 
Lactobacillus sakei subsp. sakei 23K
 
Lactobacillus salivarius subsp. salivarius UCC118

Gene: LSL_1445: Glutamate ABC transporter, substrate-binding protein
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_1935: Glutamate ABC transporter, substrate-binding protein
 
Oenococcus oeni PSU-1

Gene: OEOE_1633: Glutamate ABC transporter, substrate-binding protein
 
Pediococcus pentosaceus ATCC 25745

Gene: PEPE_0390: Glutamate ABC transporter, substrate-binding protein
Glutamate ABC transporter, substrate-binding protein
gluM
 
Lactobacillus acidophilus NCFM

Gene: LBA0581: Glutamate ABC transporter, permease protein 1
 
Lactobacillus brevis ATCC 367

Gene: LVIS_1773: Glutamate ABC transporter, permease protein 1
 
Lactobacillus casei ATCC 334

Gene: LSEI_2020: Glutamate ABC transporter, permease protein 1
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Gene: LBUL_0460: Glutamate ABC transporter, permease protein 1
 
Lactobacillus fermentum IFO 3956
 
Lactobacillus helveticus DPC 4571

Gene: lhv_0600: Glutamate ABC transporter, permease protein 1
 
Lactobacillus johnsonii NCC 533

Gene: LJ0755: Glutamate ABC transporter, permease protein 1
 
Lactobacillus plantarum WCFS1

Gene: lp_0882: Glutamate ABC transporter, permease protein 1
 
Lactobacillus reuteri JCM 1112

Gene: LAR_1422: Glutamate ABC transporter, permease protein 1
 
Lactobacillus rhamnosus GG

Gene: LGG_02007: Glutamate ABC transporter, permease protein 1
 
Lactobacillus sakei subsp. sakei 23K
 
Lactobacillus salivarius subsp. salivarius UCC118

Gene: LSL_1444: Glutamate ABC transporter, permease protein 1
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_1934: Glutamate ABC transporter, permease protein 1
 
Oenococcus oeni PSU-1

Gene: OEOE_1632: Glutamate ABC transporter, permease protein 1
 
Pediococcus pentosaceus ATCC 25745

Gene: PEPE_0391: Glutamate ABC transporter, permease protein 1
Glutamate ABC transporter, permease protein 1
gluP
 
Lactobacillus acidophilus NCFM

Gene: LBA0582: Glutamate ABC transporter, permease protein 2
 
Lactobacillus brevis ATCC 367

Gene: LVIS_1772: Glutamate ABC transporter, permease protein 2
 
Lactobacillus casei ATCC 334

Gene: LSEI_2019: Glutamate ABC transporter, permease protein 2
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Gene: LBUL_0461: Glutamate ABC transporter, permease protein 2
 
Lactobacillus fermentum IFO 3956
 
Lactobacillus helveticus DPC 4571

Gene: lhv_0601: Glutamate ABC transporter, permease protein 2
 
Lactobacillus johnsonii NCC 533

Gene: LJ0756: Glutamate ABC transporter, permease protein 2
 
Lactobacillus plantarum WCFS1

Gene: lp_0883: Glutamate ABC transporter, permease protein 2
 
Lactobacillus reuteri JCM 1112

Gene: LAR_1423: Glutamate ABC transporter, permease protein 2
 
Lactobacillus rhamnosus GG

Gene: LGG_02006: Glutamate ABC transporter, permease protein 2
 
Lactobacillus sakei subsp. sakei 23K
 
Lactobacillus salivarius subsp. salivarius UCC118

Gene: LSL_1443: Glutamate ABC transporter, permease protein 2
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_1933: Glutamate ABC transporter, permease protein 2
 
Oenococcus oeni PSU-1

Gene: OEOE_1631: Glutamate ABC transporter, permease protein 2
 
Pediococcus pentosaceus ATCC 25745

Gene: PEPE_0392: Glutamate ABC transporter, permease protein 2
Glutamate ABC transporter, permease protein 2
 
CRON 2.
glnR
 
Lactobacillus acidophilus NCFM
*
Lactobacillus brevis ATCC 367

Site:
position = -82
score = 6.27404
sequence = ATGTCAGAAAACCTAACAT

Gene: LVIS_0991: Nitrogen metabolism transcriptional regulator, MerR family
*
Lactobacillus casei ATCC 334

Site:
position = -79
score = 5.95751
sequence = ATGTCAGAAAAGCTTACAT

Gene: LSEI_1653: Nitrogen metabolism transcriptional regulator, MerR family
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
 
Lactobacillus fermentum IFO 3956
 
Lactobacillus helveticus DPC 4571
 
Lactobacillus johnsonii NCC 533
*
Lactobacillus plantarum WCFS1

Site:
position = -82
score = 5.42409
sequence = GTGTGATATTTTCTAACAT

Gene: lp_1580: Nitrogen metabolism transcriptional regulator, MerR family
 
Lactobacillus reuteri JCM 1112
*
Lactobacillus rhamnosus GG

Site:
position = -79
score = 5.99062
sequence = ATGTAAGAAAACCTTACAT

Gene: LGG_01697: Nitrogen metabolism transcriptional regulator, MerR family
*
Lactobacillus sakei subsp. sakei 23K

Site:
position = -77
score = 6.27404
sequence = ATGTCAGAAAACCTAACAT

Gene: LSA1322: Nitrogen metabolism transcriptional regulator, MerR family
*
Lactobacillus salivarius subsp. salivarius UCC118

Site:
position = -83
score = 5.38921
sequence = GTGTAAGAAAATATTACAT

Gene: LSL_0557: Nitrogen metabolism transcriptional regulator, MerR family
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Site:
position = -80
score = 5.89142
sequence = ATGTTAGAAAACCTGACAC

Gene: LEUM_0716: Nitrogen metabolism transcriptional regulator, MerR family
*
Oenococcus oeni PSU-1

Site:
position = -67
score = 5.7377
sequence = ATGTTAGCTTTCCTAACAT

Gene: OEOE_0951: Nitrogen metabolism transcriptional regulator, MerR family
*
Pediococcus pentosaceus ATCC 25745

Site:
position = -81
score = 6.1696
sequence = ATGTTAGAAAATGTAACAT

Gene: PEPE_0738: Nitrogen metabolism transcriptional regulator, MerR family
Nitrogen metabolism transcriptional regulator, MerR family
glnA
 
Lactobacillus acidophilus NCFM

Gene: LBA1501: Glutamine synthetase type I (EC 6.3.1.2)
 
Lactobacillus brevis ATCC 367

Gene: LVIS_0990: Glutamine synthetase type I (EC 6.3.1.2)
 
Lactobacillus casei ATCC 334

Gene: LSEI_1652: Glutamine synthetase type I (EC 6.3.1.2)
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Gene: LBUL_1368: Glutamine synthetase type I (EC 6.3.1.2)
 
Lactobacillus fermentum IFO 3956

Gene: LAF_1275: Glutamine synthetase type I (EC 6.3.1.2)
 
Lactobacillus helveticus DPC 4571

Gene: lhv_1558: Glutamine synthetase type I (EC 6.3.1.2)
 
Lactobacillus johnsonii NCC 533

Gene: LJ1614: Glutamine synthetase type I (EC 6.3.1.2)
 
Lactobacillus plantarum WCFS1

Gene: lp_1581: Glutamine synthetase type I (EC 6.3.1.2)
 
Lactobacillus reuteri JCM 1112

Gene: LAR_1135: Glutamine synthetase type I (EC 6.3.1.2)
 
Lactobacillus rhamnosus GG

Gene: LGG_01696: Glutamine synthetase type I (EC 6.3.1.2)
 
Lactobacillus sakei subsp. sakei 23K

Gene: LSA1321: Glutamine synthetase type I (EC 6.3.1.2)
 
Lactobacillus salivarius subsp. salivarius UCC118

Gene: LSL_0558: Glutamine synthetase type I (EC 6.3.1.2)
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_0717: Glutamine synthetase type I (EC 6.3.1.2)
 
Oenococcus oeni PSU-1

Gene: OEOE_0952: Glutamine synthetase type I (EC 6.3.1.2)
 
Pediococcus pentosaceus ATCC 25745

Gene: PEPE_0739: Glutamine synthetase type I (EC 6.3.1.2)
Glutamine synthetase type I (EC 6.3.1.2)
 
CRON 3.
ansB
 
Lactobacillus acidophilus NCFM
 
Lactobacillus brevis ATCC 367
*
Lactobacillus casei ATCC 334

Site:
position = -90
score = 4.88076
sequence = TTGTCAGACTACCTAACAA

Gene: LSEI_2863: Aspartate ammonia-lyase (EC 4.3.1.1)
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
 
Lactobacillus fermentum IFO 3956
 
Lactobacillus helveticus DPC 4571
 
Lactobacillus johnsonii NCC 533
*
Lactobacillus plantarum WCFS1

Site:
position = -44
score = 5.57736
sequence = ATGTTAGAAGATATAACAT

Gene: lp_2830: Aspartate ammonia-lyase (EC 4.3.1.1)
 
Lactobacillus reuteri JCM 1112
*
Lactobacillus rhamnosus GG

Site:
position = -90
score = 4.97125
sequence = TTGTTAGACTAGCTCACAT

Gene: LGG_02872: Aspartate ammonia-lyase (EC 4.3.1.1)
 
Lactobacillus sakei subsp. sakei 23K
 
Lactobacillus salivarius subsp. salivarius UCC118
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Site:
position = -81
score = 4.86158
sequence = GTGTCATAAAACTTAACAA

Gene: LEUM_0153: Aspartate ammonia-lyase (EC 4.3.1.1)
 
Oenococcus oeni PSU-1
 
Pediococcus pentosaceus ATCC 25745
Aspartate ammonia-lyase (EC 4.3.1.1)
 
CRON 4.
glnP
 
Lactobacillus acidophilus NCFM
 
Lactobacillus brevis ATCC 367
*
Lactobacillus casei ATCC 334

Site:
position = -172
score = 5.33503
sequence = ATGTCAATTAATCTAACAT

Gene: LSEI_2849: Glutamine ABC transporter, permease and substrate-binding protein
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Gene: LBUL_2019: Glutamine ABC transporter, permease and substrate-binding protein
 
Lactobacillus fermentum IFO 3956

Gene: LAF_0069: Glutamine ABC transporter, permease and substrate-binding protein
 
Lactobacillus helveticus DPC 4571
 
Lactobacillus johnsonii NCC 533
*
Lactobacillus plantarum WCFS1

Site:
position = -54
score = 5.49468
sequence = ATGTTATATTTTATGACAT

Gene: lp_0802: Glutamine ABC transporter, permease and substrate-binding protein
 
Lactobacillus reuteri JCM 1112

Gene: LAR_0092: Glutamine ABC transporter, permease and substrate-binding protein
*
Lactobacillus rhamnosus GG

Site:
position = -256
score = 6.08519
sequence = ATGTAAGAAAAGCTAACAT

Gene: LGG_02862: Glutamine ABC transporter, permease and substrate-binding protein
 
Lactobacillus sakei subsp. sakei 23K

Gene: LSA1497: Glutamine ABC transporter, permease and substrate-binding protein
*2
Lactobacillus salivarius subsp. salivarius UCC118

Site:
position = -44
score = 4.56029
sequence = ATGAGATATATTTTAACAT

Gene: LSL_0062: Glutamine ABC transporter, permease and substrate-binding protein

Site:
position = -157
score = 4.43552
sequence = TTGTCACTTTATATAACAT

Gene: LSL_0581: Glutamine ABC transporter, permease and substrate-binding protein
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_0438: Glutamine ABC transporter, permease and substrate-binding protein
 
Oenococcus oeni PSU-1
*
Pediococcus pentosaceus ATCC 25745

Site:
position = -34
score = 5.81956
sequence = ATGTTAGGTTATCTAACAT

Gene: PEPE_1068: Glutamine ABC transporter, permease and substrate-binding protein
Glutamine ABC transporter, permease and substrate-binding protein
glnQ
 
Lactobacillus acidophilus NCFM
 
Lactobacillus brevis ATCC 367
 
Lactobacillus casei ATCC 334

Gene: LSEI_2848: Glutamine ABC transporter, ATP-binding protein
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Gene: LBUL_2020: Glutamine ABC transporter, ATP-binding protein
 
Lactobacillus fermentum IFO 3956

Gene: LAF_0070: Glutamine ABC transporter, ATP-binding protein
 
Lactobacillus helveticus DPC 4571
 
Lactobacillus johnsonii NCC 533
 
Lactobacillus plantarum WCFS1

Gene: lp_0803: Glutamine ABC transporter, ATP-binding protein
 
Lactobacillus reuteri JCM 1112

Gene: LAR_0093: Glutamine ABC transporter, ATP-binding protein
 
Lactobacillus rhamnosus GG

Gene: LGG_02861: Glutamine ABC transporter, ATP-binding protein
 
Lactobacillus sakei subsp. sakei 23K

Gene: LSA1496: Glutamine ABC transporter, ATP-binding protein
 
Lactobacillus salivarius subsp. salivarius UCC118

Gene: LSL_0582: Glutamine ABC transporter, ATP-binding protein
 
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Gene: LEUM_0439: Glutamine ABC transporter, ATP-binding protein
 
Oenococcus oeni PSU-1
 
Pediococcus pentosaceus ATCC 25745

Gene: PEPE_1067: Glutamine ABC transporter, ATP-binding protein
Glutamine ABC transporter, ATP-binding protein
 
CRON 5.
nrgA
 
Lactobacillus acidophilus NCFM

Gene: LBA0473: Ammonium transporter
*
Lactobacillus brevis ATCC 367

Site:
position = -42
score = 6.02549
sequence = GTGTTAGAATTCCTAACAT

Site:
position = -177
score = 5.28167
sequence = ATGTCATAAAAATTAACAT

Gene: LVIS_0844: Ammonium transporter
*
Lactobacillus casei ATCC 334

Site:
position = -173
score = 4.73547
sequence = ATGTCACATAAGCTAACGC

Gene: LSEI_0653: Ammonium transporter
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Gene: LBUL_1541: Ammonium transporter
 
Lactobacillus fermentum IFO 3956

Gene: LAF_1683: Ammonium transporter
 
Lactobacillus helveticus DPC 4571

Gene: lhv_2090: Ammonium transporter
 
Lactobacillus johnsonii NCC 533
*
Lactobacillus plantarum WCFS1

Site:
position = -46
score = 6.21067
sequence = ATGTTATAATTTCTAACAT

Gene: lp_0349: Ammonium transporter
 
Lactobacillus reuteri JCM 1112

Gene: LAR_1328: Ammonium transporter
*
Lactobacillus rhamnosus GG

Site:
position = -174
score = 5.36855
sequence = ATGTTATATAAGCTGACGT

Gene: LGG_00633: Ammonium transporter
 
Lactobacillus sakei subsp. sakei 23K
*
Lactobacillus salivarius subsp. salivarius UCC118

Site:
position = -94
score = 5.37565
sequence = ATGTCATAAAAAGTTACAT

Site:
position = -41
score = 5.38035
sequence = ATGTTATAATTTTTGACAT

Gene: LSL_0235: Ammonium transporter
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Site:
position = -89
score = 5.34273
sequence = ATGTAAGAAAAGCTACCAC

Gene: LEUM_0776: Ammonium transporter
*
Oenococcus oeni PSU-1

Site:
position = -62
score = 4.80128
sequence = TTGTTATATTAGTTAACAC

Gene: OEOE_1679: Ammonium transporter
 
Pediococcus pentosaceus ATCC 25745
Ammonium transporter
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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