Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NmlR - Streptococcaceae

Properties
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: activator
Biological process: Carbonyl stress response
Effector: Methylglyoxal; Formaldehyde; Nitric oxide
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 14 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Lactococcus lactis subsp. cremoris SK11 6 2
Lactococcus lactis subsp. lactis Il1403 6 2
Streptococcus agalactiae 2603V/R 4 2
Streptococcus dysgalactiae subsp. equisimilis GGS_124
Streptococcus equi subsp. zooepidemicus MGCS10565
Streptococcus gallolyticus UCN34 4 2
Streptococcus gordonii str. Challis substr. CH1
Streptococcus mitis B6
Streptococcus mutans UA159 4 2
Streptococcus pneumoniae TIGR4 2 1
Streptococcus pyogenes M1 GAS
Streptococcus sanguinis SK36
Streptococcus suis 05ZYH33 1 1
Streptococcus thermophilus CNRZ1066
Streptococcus uberis 0140J 4 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ypiA
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -50
score = 6.28964
sequence = AGTTGACTTGAAGTGGACT

Gene: LACR_1627: Short chain dehydrogenase
*
Lactococcus lactis subsp. lactis Il1403

Site:
position = -65
score = 6.47133
sequence = AGTTGACTTGAAGTGAACT

Gene: L179660: Short chain dehydrogenase
 
Streptococcus agalactiae 2603V/R
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gallolyticus UCN34
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
 
Streptococcus mutans UA159
 
Streptococcus pneumoniae TIGR4
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus suis 05ZYH33
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus uberis 0140J
Short chain dehydrogenase
yphK
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1626: hypothetical protein
 
Lactococcus lactis subsp. lactis Il1403

Gene: L179277: hypothetical protein
 
Streptococcus agalactiae 2603V/R
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gallolyticus UCN34
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
 
Streptococcus mutans UA159
 
Streptococcus pneumoniae TIGR4
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus suis 05ZYH33
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus uberis 0140J
hypothetical protein
yphJ
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1625: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
 
Lactococcus lactis subsp. lactis Il1403

Gene: L178933: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
 
Streptococcus agalactiae 2603V/R
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gallolyticus UCN34
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
 
Streptococcus mutans UA159
 
Streptococcus pneumoniae TIGR4
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus suis 05ZYH33
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus uberis 0140J
4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
yphI
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1624: hypothetical protein
 
Lactococcus lactis subsp. lactis Il1403

Gene: L178621: hypothetical protein
 
Streptococcus agalactiae 2603V/R
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gallolyticus UCN34
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
 
Streptococcus mutans UA159
 
Streptococcus pneumoniae TIGR4
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus suis 05ZYH33
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus uberis 0140J
hypothetical protein
yphH
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1623: Hypothetical protein
 
Lactococcus lactis subsp. lactis Il1403

Gene: L178204: Hypothetical protein
 
Streptococcus agalactiae 2603V/R

Gene: SAG0426: Hypothetical protein
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gallolyticus UCN34
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
 
Streptococcus mutans UA159
 
Streptococcus pneumoniae TIGR4
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus suis 05ZYH33
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus uberis 0140J

Gene: SUB1074: Hypothetical protein
Hypothetical protein
nmlR
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -39
score = 5.60265
sequence = TATTGACTTAAAGTTCACT

Gene: LACR_2072: Carbonyl stress response transcriptional regulator, MerR family
*
Lactococcus lactis subsp. lactis Il1403

Site:
position = -39
score = 5.60265
sequence = TATTGACTTAAAGTTCACT

Gene: L0246: Carbonyl stress response transcriptional regulator, MerR family
 
Streptococcus agalactiae 2603V/R

Gene: SAG0427: Carbonyl stress response transcriptional regulator, MerR family
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
*
Streptococcus gallolyticus UCN34

Site:
position = -61
score = 6.32917
sequence = GCTTGACTTGGAGTTAGCT

Gene: GALLO_0910: Carbonyl stress response transcriptional regulator, MerR family
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
*
Streptococcus mutans UA159

Site:
position = -66
score = 6.62048
sequence = ACTTGACTTGAAGTAGACT

Gene: SMU.677: Carbonyl stress response transcriptional regulator, MerR family
*
Streptococcus pneumoniae TIGR4

Site:
position = -91
score = 6.85286
sequence = GCTTGACTTGGAGTCAACT

Gene: SP_1856: Carbonyl stress response transcriptional regulator, MerR family
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus suis 05ZYH33

Gene: SSU05_0503: Carbonyl stress response transcriptional regulator, MerR family
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus uberis 0140J

Gene: SUB1075: Carbonyl stress response transcriptional regulator, MerR family
Carbonyl stress response transcriptional regulator, MerR family
adhY
 
Lactococcus lactis subsp. cremoris SK11
 
Lactococcus lactis subsp. lactis Il1403
 
Streptococcus agalactiae 2603V/R
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 2
Streptococcus gallolyticus UCN34

Gene: GALLO_0911: Predicted aldo/keto reductase

Gene: GALLO_1311: Predicted aldo/keto reductase
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
 2
Streptococcus mutans UA159

Gene: SMU.678: Predicted aldo/keto reductase

Gene: SMU.679: Predicted aldo/keto reductase
 
Streptococcus pneumoniae TIGR4
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus suis 05ZYH33
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus uberis 0140J
Predicted aldo/keto reductase
adhC
 
Lactococcus lactis subsp. cremoris SK11
 
Lactococcus lactis subsp. lactis Il1403
*2
Streptococcus agalactiae 2603V/R

Site:
position = -58
score = 6.76413
sequence = TCTTGACTTGAAGTTAACT

Gene: SAG0428: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1)

Site:
position = -66
score = 6.80218
sequence = CCTTGACTTGGAGTTAACT

Gene: SAG0429: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1)
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus equi subsp. zooepidemicus MGCS10565
*2
Streptococcus gallolyticus UCN34

Site:
position = -73
score = 7.05071
sequence = ACTTGACTTGGAGTTAACT

Gene: GALLO_1312: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1)

Gene: GALLO_1932: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1)
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus mitis B6
*
Streptococcus mutans UA159

Site:
position = -61
score = 6.39193
sequence = ACTTGACTTAGAGTCCACT

Gene: SMU.1867c: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1)
 
Streptococcus pneumoniae TIGR4

Gene: SP_1855: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1)
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36

Gene: SSA_0921: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1)
*
Streptococcus suis 05ZYH33

Site:
position = -12
score = 6.50938
sequence = ACTTGACTTAGAGTGAACT

Gene: SSU05_1388: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1)
 
Streptococcus thermophilus CNRZ1066

Gene: str0936: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1)
*2
Streptococcus uberis 0140J

Site:
position = -57
score = 6.86259
sequence = GCTTGACTTGAAGTTAACT

Gene: SUB1076: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1)

Site:
position = -92
score = 5.82046
sequence = ACTTGACTTAGAGCCCACT

Gene: SUB0101: Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1)
Alcohol dehydrogenase, zinc-containing (EC 1.1.1.1)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD