Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NrdR - Chloroflexia

Properties
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Chloroflexi
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Chloroflexus aggregans DSM 9485 1 1
Chloroflexus sp. Y-400-fl 1 1
Roseiflexus sp. RS-1 1 1
Roseiflexus castenholzii DSM 13941 1 1
Herpetosiphon aurantiacus ATCC 23779 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nrdJ
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
*
Roseiflexus sp. RS-1

Site:
position = -213
score = 4.389
sequence = GCGCTATATTTAGGAA

Gene: RoseRS_4577: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
*
Roseiflexus castenholzii DSM 13941

Site:
position = -219
score = 4.18885
sequence = GCGCCATATTTAGGAA

Site:
position = -334
score = 4.24889
sequence = ATACCGGATTTAGTTC

Gene: Rcas_0124: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
*
Herpetosiphon aurantiacus ATCC 23779

Site:
position = -326
score = 4.80687
sequence = ATACTATATATTGGAT

Gene: Haur_4766: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
 
CRON 2.
nrdJ2
*
Chloroflexus aggregans DSM 9485

Site:
position = -137
score = 5.12498
sequence = ACACTAGATGTAGTAC

Site:
position = -282
score = 4.07291
sequence = GTGCTGGATATGGTAA

Site:
position = -294
score = 4.84815
sequence = ATACCAGATTTGGTGC

Gene: Cagg_2767: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
*
Chloroflexus sp. Y-400-fl

Site:
position = -137
score = 5.40764
sequence = ACACTAGATATAGTAT

Gene: Chy400_1894: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
 
Roseiflexus sp. RS-1
 
Roseiflexus castenholzii DSM 13941
 
Herpetosiphon aurantiacus ATCC 23779
Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD