Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Cobalamin - Chloroflexia

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Phylum: Chloroflexi
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Chloroflexus aggregans DSM 9485 26 2
Chloroflexus sp. Y-400-fl 14 3
Roseiflexus castenholzii DSM 13941 23 2
Roseiflexus sp. RS-1 32 3
Herpetosiphon aurantiacus ATCC 23779 16 3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
btuR
*
Chloroflexus aggregans DSM 9485

Site:
position = -262
score = 62.66
sequence = GCAATTCCATACTCA...

Gene: Cagg_1279: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
*
Chloroflexus sp. Y-400-fl

Site:
position = -272
score = 62.1
sequence = CAAGTTCGTAGATCG...

Gene: Chy400_2789: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
*
Roseiflexus castenholzii DSM 13941

Site:
position = -424
score = 61.32
sequence = TCAATCCAACGACCG...

Gene: Rcas_0649: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
*
Roseiflexus sp. RS-1

Site:
position = -361
score = 61.95
sequence = AATGCAACGACCGTC...

Gene: RoseRS_0557: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
*
Herpetosiphon aurantiacus ATCC 23779

Site:
position = -281
score = 59.13
sequence = AATTTACAAGTTTGT...

Gene: Haur_1060: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
cobN
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1278: CobN component of cobalt chelatase involved in B12 biosynthesis
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2788: CobN component of cobalt chelatase involved in B12 biosynthesis
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0648: CobN component of cobalt chelatase involved in B12 biosynthesis
 
Roseiflexus sp. RS-1

Gene: RoseRS_0558: CobN component of cobalt chelatase involved in B12 biosynthesis
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_1059: CobN component of cobalt chelatase involved in B12 biosynthesis
CobN component of cobalt chelatase involved in B12 biosynthesis
cobT
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1277: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2787: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0647: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0559: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
 
Herpetosiphon aurantiacus ATCC 23779
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
cbiM
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1276: Substrate-specific component CbiM of cobalt ECF transporter
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2786: Substrate-specific component CbiM of cobalt ECF transporter
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1

Gene: RoseRS_0560: Substrate-specific component CbiM of cobalt ECF transporter
 
Herpetosiphon aurantiacus ATCC 23779
Substrate-specific component CbiM of cobalt ECF transporter
cbiN
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1275: Additional substrate-specific component CbiN of cobalt ECF transporter
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2785: Additional substrate-specific component CbiN of cobalt ECF transporter
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1

Gene: RoseRS_0561: Additional substrate-specific component CbiN of cobalt ECF transporter
 
Herpetosiphon aurantiacus ATCC 23779
Additional substrate-specific component CbiN of cobalt ECF transporter
cbiQ
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1274: Transmembrane component CbiQ of energizing module of cobalt ECF transporter
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1

Gene: RoseRS_0562: Transmembrane component CbiQ of energizing module of cobalt ECF transporter
 
Herpetosiphon aurantiacus ATCC 23779
Transmembrane component CbiQ of energizing module of cobalt ECF transporter
cbiO
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1273: ATPase component CbiO of energizing module of cobalt ECF transporter
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2783: ATPase component CbiO of energizing module of cobalt ECF transporter
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0646: ATPase component CbiO of energizing module of cobalt ECF transporter
 
Roseiflexus sp. RS-1

Gene: RoseRS_0563: ATPase component CbiO of energizing module of cobalt ECF transporter
 
Herpetosiphon aurantiacus ATCC 23779
ATPase component CbiO of energizing module of cobalt ECF transporter
cbiB
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1272: Adenosylcobinamide-phosphate synthase
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2782: Adenosylcobinamide-phosphate synthase
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0645: Adenosylcobinamide-phosphate synthase
 
Roseiflexus sp. RS-1

Gene: RoseRS_0564: Adenosylcobinamide-phosphate synthase
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_1057: Adenosylcobinamide-phosphate synthase
Adenosylcobinamide-phosphate synthase
cbiX
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1271: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2779: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0644: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0565: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
 
Herpetosiphon aurantiacus ATCC 23779
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
wrbA
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1270: multimeric flavodoxin WrbA-like protein
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2778: multimeric flavodoxin WrbA-like protein
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0643: multimeric flavodoxin WrbA-like protein
 
Roseiflexus sp. RS-1

Gene: RoseRS_0566: multimeric flavodoxin WrbA-like protein
 
Herpetosiphon aurantiacus ATCC 23779
multimeric flavodoxin WrbA-like protein
cbiC
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1269: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2777: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0642: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0567: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
 
Herpetosiphon aurantiacus ATCC 23779
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
cbiD
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1268: Cobalt-precorrin-6 synthase, anaerobic
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2776: Cobalt-precorrin-6 synthase, anaerobic
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0641: Cobalt-precorrin-6 synthase, anaerobic
 
Roseiflexus sp. RS-1

Gene: RoseRS_0568: Cobalt-precorrin-6 synthase, anaerobic
 
Herpetosiphon aurantiacus ATCC 23779
Cobalt-precorrin-6 synthase, anaerobic
cbiET
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1267: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2775: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0640: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0569: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
 
Herpetosiphon aurantiacus ATCC 23779
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
cbiL
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1266: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2774: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0639: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0570: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Herpetosiphon aurantiacus ATCC 23779
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
cbiF
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1265: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2773: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0638: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0571: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
 
Herpetosiphon aurantiacus ATCC 23779
Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
cbiGH
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1264: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2772: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0637: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
 
Roseiflexus sp. RS-1

Gene: RoseRS_0572: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
 
Herpetosiphon aurantiacus ATCC 23779
Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
cobA
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1263: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2771: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0636: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0573: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 
Herpetosiphon aurantiacus ATCC 23779
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
cbiA
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1262: Cobyrinic acid A,C-diamide synthase
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2770: Cobyrinic acid A,C-diamide synthase
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0635: Cobyrinic acid A,C-diamide synthase
 
Roseiflexus sp. RS-1

Gene: RoseRS_0574: Cobyrinic acid A,C-diamide synthase
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_2329: Cobyrinic acid A,C-diamide synthase
Cobyrinic acid A,C-diamide synthase
cobU
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1261: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2769: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0634: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0575: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_1053: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
cobD
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1260: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2768: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0633: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0576: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_1052: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
cbiP
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_1259: Cobyric acid synthase
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2767: Cobyric acid synthase
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0632: Cobyric acid synthase
 
Roseiflexus sp. RS-1

Gene: RoseRS_0577: Cobyric acid synthase
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_1051: Cobyric acid synthase
Cobyric acid synthase
Haur_1058
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_1058: Methyltransferase type 11
Methyltransferase type 11
btuF
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_1056: Vitamin B12 ABC transporter, B12-binding component BtuF
Vitamin B12 ABC transporter, B12-binding component BtuF
btuC
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_1055: Vitamin B12 ABC transporter, permease component BtuC
Vitamin B12 ABC transporter, permease component BtuC
btuD
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_1054: Vitamin B12 ABC transporter, ATPase component BtuD
Vitamin B12 ABC transporter, ATPase component BtuD
 
CRON 2.
cbrX
*
Chloroflexus aggregans DSM 9485

Site:
position = -313
score = 47.26
sequence = TGTATCACCCCACCG...

Gene: Cagg_2179: LPXTG-motif cell wall anchor domain protein
*
Chloroflexus sp. Y-400-fl

Site:
position = -267
score = 37.58
sequence = ATCAGACCTGTCCTG...

Gene: Chy400_1314: LPXTG-motif cell wall anchor domain protein
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
*
Herpetosiphon aurantiacus ATCC 23779

Site:
position = -213
score = 47.67
sequence = ATCATAAATTGCTAT...

Gene: Haur_3809: LPXTG-motif cell wall anchor domain protein
LPXTG-motif cell wall anchor domain protein
cbrY
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2178: hypothetical secreted protein, a putative component of B12 transporter, anchored in the membrane
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1313: hypothetical secreted protein, a putative component of B12 transporter, anchored in the membrane
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_3810: hypothetical secreted protein, a putative component of B12 transporter, anchored in the membrane
hypothetical secreted protein, a putative component of B12 transporter, anchored in the membrane
cobC
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2177: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1312: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
 
Herpetosiphon aurantiacus ATCC 23779
Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
cobS
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2176: Cobalamin 5'-phosphate synthase
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1311: Cobalamin 5'-phosphate synthase
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0173: Cobalamin 5'-phosphate synthase
 
Roseiflexus sp. RS-1

Gene: RoseRS_4584: Cobalamin 5'-phosphate synthase
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4390: Cobalamin 5'-phosphate synthase
Cobalamin 5'-phosphate synthase
cbrV
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2175: Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1310: Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_3811: Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter
Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter
 
CRON 3.
nrdA
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
*
Herpetosiphon aurantiacus ATCC 23779

Site:
position = -279
score = 33.58
sequence = TACAAATTTTTTTGA...

Gene: Haur_2575: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
nrdB
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_2574: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
metE
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_2573: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
CRON 4.
RoseRS_3103
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
*
Roseiflexus sp. RS-1

Site:
position = -344
score = 63.78
sequence = TAAACCTTTCAAACG...

Gene: RoseRS_3103: hypothetical protein
 
Herpetosiphon aurantiacus ATCC 23779
hypothetical protein
RoseRS_3102
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1

Gene: RoseRS_3102: Core component MTH452 of predicted ECF transporter
 
Herpetosiphon aurantiacus ATCC 23779
Core component MTH452 of predicted ECF transporter
RoseRS_3101
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1

Gene: RoseRS_3101: Transmembrane component of energizing module of ECF transporters
 
Herpetosiphon aurantiacus ATCC 23779
Transmembrane component of energizing module of ECF transporters
RoseRS_3100
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1

Gene: RoseRS_3100: Duplicated ATPase component of energizing module of ECF transporters / ATPase component of general energizing module of ECF transporters
 
Herpetosiphon aurantiacus ATCC 23779
Duplicated ATPase component of energizing module of ECF transporters / ATPase component of general energizing module of ECF transporters
cobN
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1

Gene: RoseRS_3099: Cobaltochelatase subunit CobN
 
Herpetosiphon aurantiacus ATCC 23779
Cobaltochelatase subunit CobN
RoseRS_3098
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1

Gene: RoseRS_3098: hypothetical protein
 
Herpetosiphon aurantiacus ATCC 23779
hypothetical protein
 
CRON 5.
Rcas_2247
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
*
Roseiflexus castenholzii DSM 13941

Site:
position = -325
score = 64.2
sequence = CAAGTGAATACCATC...

Gene: Rcas_2247: hypothetical protein
*
Roseiflexus sp. RS-1

Site:
position = -197
score = 65.42
sequence = CAAGTGAATACCATC...

Gene: RoseRS_3085: hypothetical protein
 
Herpetosiphon aurantiacus ATCC 23779
hypothetical protein
btuF
 
Chloroflexus aggregans DSM 9485
*
Chloroflexus sp. Y-400-fl

Site:
position = -421
score = 66.09
sequence = CAAGTTCATATCGTC...

Gene: Chy400_0336: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2248: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Roseiflexus sp. RS-1

Gene: RoseRS_3086: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Herpetosiphon aurantiacus ATCC 23779
Vitamin B12 ABC transporter, B12-binding component BtuF
cbiW
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_0337: ferredoxin-like protein
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2249: ferredoxin-like protein
 
Roseiflexus sp. RS-1

Gene: RoseRS_3087: ferredoxin-like protein
 
Herpetosiphon aurantiacus ATCC 23779
ferredoxin-like protein
btuC
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_0338: Vitamin B12 ABC transporter, permease component BtuC
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2250: Vitamin B12 ABC transporter, permease component BtuC
 
Roseiflexus sp. RS-1

Gene: RoseRS_3088: Vitamin B12 ABC transporter, permease component BtuC
 
Herpetosiphon aurantiacus ATCC 23779
Vitamin B12 ABC transporter, permease component BtuC
btuD
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_0339: Vitamin B12 ABC transporter, ATP-binding component BtuD
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2251: Vitamin B12 ABC transporter, ATP-binding component BtuD
 
Roseiflexus sp. RS-1

Gene: RoseRS_3089: Vitamin B12 ABC transporter, ATP-binding component BtuD
 
Herpetosiphon aurantiacus ATCC 23779
Vitamin B12 ABC transporter, ATP-binding component BtuD
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD