Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DVU2827 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process: Pyruvate metabolism
Effector:
Phylum: Proteobacteria/delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 26 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028 6 2
Desulfovibrio desulfuricans G20 5 2
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 6 2
Desulfovibrio magneticus RS-1
Desulfovibrio piger ATCC 29098 4 2
Desulfovibrio salexigens DSM 2638
Desulfovibrio vulgaris Hildenborough 5 2
Desulfovibrio vulgaris str. Miyazaki F
Lawsonia intracellularis PHE/MN1-00
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
dtcP
 
Desulfohalobium retbaense DSM 5692
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -370
score = 5.84292
sequence = GGTTGCAAATTTGCAACG

Site:
position = -422
score = 5.4684
sequence = CGTCGCAAACTTGCAACA

Gene: Dbac_1588: TRAP dicarboxylate transporter, DctP subunit
*
Desulfovibrio desulfuricans G20

Site:
position = -196
score = 5.16796
sequence = TGTTTCATAATTGGAACA

Site:
position = -265
score = 4.8925
sequence = TGTTCCACCTTTGCAACA

Gene: Dde_1275: TRAP dicarboxylate transporter, DctP subunit
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -204
score = 4.82013
sequence = CGTTCCAAAAATGAAACC

Site:
position = -272
score = 4.66343
sequence = CGTTTCGTTTTTGCATCA

Gene: DVU2822: TRAP dicarboxylate transporter, DctP subunit
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1932: TRAP dicarboxylate transporter, DctP subunit
 
Lawsonia intracellularis PHE/MN1-00
TRAP dicarboxylate transporter, DctP subunit
dctM
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1589: TRAP dicarboxylate transporter, DctM subunit
 
Desulfovibrio desulfuricans G20

Gene: Dde_1274: TRAP dicarboxylate transporter, DctM subunit
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2823: TRAP dicarboxylate transporter, DctM subunit
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1931: TRAP dicarboxylate transporter, DctM subunit
 
Lawsonia intracellularis PHE/MN1-00
TRAP dicarboxylate transporter, DctM subunit
DVU2824
 
Desulfohalobium retbaense DSM 5692
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -308
score = 5.84292
sequence = CGTTGCAAATTTGCAACC

Site:
position = -256
score = 5.4684
sequence = TGTTGCAAGTTTGCGACG

Gene: Dbac_1587: Pyruvate formate-lyase (EC 2.3.1.54)
 
Desulfovibrio desulfuricans G20

Gene: Dde_1273: Pyruvate formate-lyase (EC 2.3.1.54)
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Site:
position = -222
score = 5.03133
sequence = TGGTGCAAAAAAGCATCA

Site:
position = -263
score = 4.29152
sequence = CGTCGCAAAAATGGATGG

Site:
position = -398
score = 4.74408
sequence = AGTCGCAAGTTTGCAGCT

Site:
position = -276
score = 5.36822
sequence = TGTTGCAAAAATGCGTCG

Gene: Ddes_1436: Pyruvate formate-lyase (EC 2.3.1.54)
 
Desulfovibrio magneticus RS-1
*
Desulfovibrio piger ATCC 29098

Site:
position = -208
score = 5.18559
sequence = TGATGCATTTTAGCATCA

Site:
position = -157
score = 4.86265
sequence = AGGCGCAGATTTGCATCA

Site:
position = -332
score = 5.26644
sequence = GGGTGCAAAAATGCATCA

Site:
position = -89
score = 4.41802
sequence = TGTTACAAAAATGGCACA

Gene: DESPIG_02849: Pyruvate formate-lyase (EC 2.3.1.54)
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2824: Pyruvate formate-lyase (EC 2.3.1.54)
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
Pyruvate formate-lyase (EC 2.3.1.54)
DVU2825
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1586: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
 
Desulfovibrio desulfuricans G20

Gene: Dde_1272: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1435: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02850: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2825: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
DVU2827
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1585: PAS modulated sigma54 specific transcriptional regulator, Fis family
 
Desulfovibrio desulfuricans G20

Gene: Dde_1270: PAS modulated sigma54 specific transcriptional regulator, Fis family
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1434: PAS modulated sigma54 specific transcriptional regulator, Fis family
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02851: PAS modulated sigma54 specific transcriptional regulator, Fis family
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2827: PAS modulated sigma54 specific transcriptional regulator, Fis family
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
PAS modulated sigma54 specific transcriptional regulator, Fis family
Ddes_1433
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1433: hypothetical protein
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
hypothetical protein
DVU2820
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1590: amidohydrolase family protein
*
Desulfovibrio desulfuricans G20

Site:
position = -254
score = 4.88282
sequence = GGTTGCAAAAGTGAAACG

Gene: Dde_1278: amidohydrolase family protein
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Site:
position = -479
score = 4.29152
sequence = CCATCCATTTTTGCGACG

Site:
position = -344
score = 4.74408
sequence = AGCTGCAAACTTGCGACT

Site:
position = -466
score = 5.36822
sequence = CGACGCATTTTTGCAACA

Gene: Ddes_1437: amidohydrolase family protein
 
Desulfovibrio magneticus RS-1
*
Desulfovibrio piger ATCC 29098

Site:
position = -356
score = 4.86265
sequence = TGATGCAAATCTGCGCCT

Site:
position = -305
score = 5.18559
sequence = TGATGCTAAAATGCATCA

Site:
position = -181
score = 5.26644
sequence = TGATGCATTTTTGCACCC

Site:
position = -424
score = 4.41802
sequence = TGTGCCATTTTTGTAACA

Gene: DESPIG_02848: amidohydrolase family protein
 
Desulfovibrio salexigens DSM 2638
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -499
score = 4.82013
sequence = GGTTTCATTTTTGGAACG

Site:
position = -431
score = 4.66343
sequence = TGATGCAAAAACGAAACG

Gene: DVU2820: amidohydrolase family protein
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
amidohydrolase family protein
Ddes_1438
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1438: major facilitator superfamily MFS_1
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02846: major facilitator superfamily MFS_1
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
major facilitator superfamily MFS_1
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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