Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DVU2275 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process: Pyruvate metabolism
Effector:
Phylum: Proteobacteria/delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028
Desulfovibrio desulfuricans G20
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1
Desulfovibrio piger ATCC 29098 4 1
Desulfovibrio salexigens DSM 2638 5 1
Desulfovibrio vulgaris Hildenborough 4 1
Desulfovibrio vulgaris str. Miyazaki F
Lawsonia intracellularis PHE/MN1-00
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
DVU2272
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
*
Desulfovibrio piger ATCC 29098

Site:
position = -192
score = 5.24001
sequence = CATTAAAATTTCTTT

Site:
position = -213
score = 5.4983
sequence = AGAGAAAGTTTTTTT

Gene: DESPIG_02142: Pyruvate formate-lyase (EC 2.3.1.54)
*
Desulfovibrio salexigens DSM 2638

Site:
position = -239
score = 5.56175
sequence = AACCAAAATTTCTTT

Site:
position = -258
score = 5.36915
sequence = AAAAAAATATTTTTT

Site:
position = -219
score = 5.6909
sequence = AAGAAAAATTTCTTT

Gene: Desal_3528: Pyruvate formate-lyase (EC 2.3.1.54)
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -344
score = 5.82004
sequence = AAAGAAAGTTTTTTT

Gene: DVU2272: Pyruvate formate-lyase (EC 2.3.1.54)
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
Pyruvate formate-lyase (EC 2.3.1.54)
pflA
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02143: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_3529: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2271: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Desal_3530
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_1057: C_GCAxxG_C_C family protein
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_15630: C_GCAxxG_C_C family protein
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_3530: C_GCAxxG_C_C family protein
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2753: C_GCAxxG_C_C family protein
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1171: C_GCAxxG_C_C family protein
 
Lawsonia intracellularis PHE/MN1-00
C_GCAxxG_C_C family protein
DVU2270
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02144: hypothetical protein
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_3531: hypothetical protein
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2270: hypothetical protein
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
hypothetical protein
DVU2269
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02145: hypothetical protein
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_3532: hypothetical protein
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2269: hypothetical protein
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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