Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PhnF - Enterobacteriales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Phosphonate utilization
Effector:
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Escherichia coli str. K-12 substr. MG1655 11 1
Salmonella typhimurium LT2
Citrobacter koseri ATCC BAA-895 10 1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 10 1
Enterobacter sp. 638 11 1
Erwinia amylovora ATCC 49946
Yersinia pestis KIM 6 1
Serratia proteamaculans 568 11 1
Erwinia carotovora subsp. atroseptica SCRI1043
Edwardsiella tarda EIB202
Proteus mirabilis HI4320
Photorhabdus luminescens subsp. laumondii TTO1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
phnF
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = 6
score = 5.04524
sequence = TTGTCTACACAT

Gene: b4102: Transcriptional regulator for phosphonate utilization, GntR family
 
Salmonella typhimurium LT2
*
Citrobacter koseri ATCC BAA-895

Site:
position = 12
score = 5.04524
sequence = TTGTCTACACAT

Gene: CKO_03768: Transcriptional regulator for phosphonate utilization, GntR family
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = 12
score = 4.54501
sequence = CTGTCCAGACAT

Gene: KPN_04500: Transcriptional regulator for phosphonate utilization, GntR family
*
Enterobacter sp. 638

Site:
position = 6
score = 4.86563
sequence = TTATCCAGACAT

Gene: Ent638_0306: Transcriptional regulator for phosphonate utilization, GntR family
 
Erwinia amylovora ATCC 49946
*
Yersinia pestis KIM

Site:
position = 6
score = 4.86692
sequence = TTATCTAGACCA

Gene: y0730: Transcriptional regulator for phosphonate utilization, GntR family
*
Serratia proteamaculans 568

Site:
position = 9
score = 5.18164
sequence = TTATCTAGACAT

Gene: Spro_0522: Transcriptional regulator for phosphonate utilization, GntR family
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
Transcriptional regulator for phosphonate utilization, GntR family
phnG
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4101: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03769: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04499: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
 
Enterobacter sp. 638

Gene: Ent638_0305: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y0729: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
 
Serratia proteamaculans 568

Gene: Spro_0521: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0490: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
phnH
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4100: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03770: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04498: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
 
Enterobacter sp. 638

Gene: Ent638_0304: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y0728: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
 
Serratia proteamaculans 568

Gene: Spro_0520: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0491: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
phnI
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4099: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03771: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04497: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
 
Enterobacter sp. 638

Gene: Ent638_0303: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y0727: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
 
Serratia proteamaculans 568

Gene: Spro_0519: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0492: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
phnJ
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4098: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03772: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04496: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
 
Enterobacter sp. 638

Gene: Ent638_0302: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y0726: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
 
Serratia proteamaculans 568

Gene: Spro_0518: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0493: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
phnK
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4097: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03773: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04495: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
 
Enterobacter sp. 638

Gene: Ent638_0301: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y0725: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
 
Serratia proteamaculans 568

Gene: Spro_0517: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0494: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
phnL
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4096: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03774: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04494: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
 
Enterobacter sp. 638

Gene: Ent638_0300: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y0723: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
 
Serratia proteamaculans 568

Gene: Spro_0516: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0495: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
phnM
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4095: Alpha-D-ribose-1-methylphosphonate-5-triphosphate hydrolase
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03775: Alpha-D-ribose-1-methylphosphonate-5-triphosphate hydrolase
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04493: Alpha-D-ribose-1-methylphosphonate-5-triphosphate hydrolase
 
Enterobacter sp. 638

Gene: Ent638_0299: Alpha-D-ribose-1-methylphosphonate-5-triphosphate hydrolase
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y0722: Alpha-D-ribose-1-methylphosphonate-5-triphosphate hydrolase
 
Serratia proteamaculans 568

Gene: Spro_0515: Alpha-D-ribose-1-methylphosphonate-5-triphosphate hydrolase
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0496: Alpha-D-ribose-1-methylphosphonate-5-triphosphate hydrolase
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
Alpha-D-ribose-1-methylphosphonate-5-triphosphate hydrolase
phnN
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4094: Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming)
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03776: Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04492: Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming)
 
Enterobacter sp. 638

Gene: Ent638_0298: Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y0721: Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming)
 
Serratia proteamaculans 568

Gene: Spro_0514: Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming)
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0497: Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming)
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming)
phnO
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4093: Aminoalkylphosphonic acid N-acetyltransferase
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03777: Aminoalkylphosphonic acid N-acetyltransferase
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638

Gene: Ent638_0297: Aminoalkylphosphonic acid N-acetyltransferase
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568

Gene: Spro_0513: Aminoalkylphosphonic acid N-acetyltransferase
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
Aminoalkylphosphonic acid N-acetyltransferase
phnP
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4092: Phosphoribosyl 1,2-cyclic phosphodiesterase (EC 3.1.4.-)
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04491: Phosphoribosyl 1,2-cyclic phosphodiesterase (EC 3.1.4.-)
 
Enterobacter sp. 638

Gene: Ent638_0296: Phosphoribosyl 1,2-cyclic phosphodiesterase (EC 3.1.4.-)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y0720: Phosphoribosyl 1,2-cyclic phosphodiesterase (EC 3.1.4.-)
 
Serratia proteamaculans 568

Gene: Spro_0512: Phosphoribosyl 1,2-cyclic phosphodiesterase (EC 3.1.4.-)
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0498: Phosphoribosyl 1,2-cyclic phosphodiesterase (EC 3.1.4.-)
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
Phosphoribosyl 1,2-cyclic phosphodiesterase (EC 3.1.4.-)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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