Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog T-box(Ile) - Streptococcaceae

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Ile-tRNA
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptococcus pneumoniae TIGR4 1 1
Streptococcus equi subsp. zooepidemicus MGCS10565 1 1
Streptococcus gordonii str. Challis substr. CH1 1 1
Streptococcus thermophilus CNRZ1066 1 1
Streptococcus mutans UA159 1 1
Streptococcus pyogenes M1 GAS 1 1
Streptococcus sanguinis SK36 1 1
Streptococcus agalactiae 2603V/R 1 1
Streptococcus uberis 0140J 1 1
Lactococcus lactis subsp. cremoris SK11 1 1
Lactococcus lactis subsp. lactis Il1403 1 1
Streptococcus suis 05ZYH33 2 1
Streptococcus dysgalactiae subsp. equisimilis GGS_124 1 1
Streptococcus gallolyticus UCN34 1 1
Streptococcus mitis B6 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
SSU05_0488
 
Streptococcus pneumoniae TIGR4
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus mutans UA159
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus agalactiae 2603V/R
 
Streptococcus uberis 0140J
 
Lactococcus lactis subsp. cremoris SK11
 
Lactococcus lactis subsp. lactis Il1403
*
Streptococcus suis 05ZYH33

Site:
position = -174
score = 97.76
sequence = CATAAGCAAAGACAA...

Gene: SSU05_0488: Histone acetyltransferase HPA2 and related acetyltransferases
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus gallolyticus UCN34
 
Streptococcus mitis B6
Histone acetyltransferase HPA2 and related acetyltransferases
ileS
*
Streptococcus pneumoniae TIGR4

Site:
position = -252
score = 89.43
sequence = GAAATATTCTGAGAA...

Gene: SP_1659: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Streptococcus equi subsp. zooepidemicus MGCS10565

Site:
position = -271
score = 75.45
sequence = TCATAAGAAAAACAG...

Gene: Sez_0602: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Streptococcus gordonii str. Challis substr. CH1

Site:
position = -261
score = 93.68
sequence = GAACTGTAAAAACAC...

Gene: SGO_0681: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Streptococcus thermophilus CNRZ1066

Site:
position = -260
score = 91.45
sequence = TATTAGCGAATAAGA...

Gene: str0741: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Streptococcus mutans UA159

Site:
position = -260
score = 24.14
sequence = ATTAAGGTGGTACCA...

Gene: SMU.558: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Streptococcus pyogenes M1 GAS

Site:
position = -279
score = 78.19
sequence = TATCTAAATAAAGAA...

Gene: SPy1513: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Streptococcus sanguinis SK36

Site:
position = -268
score = 92.11
sequence = AGATTGTAAAAACAC...

Gene: SSA_0661: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Streptococcus agalactiae 2603V/R

Site:
position = -295
score = 78.54
sequence = TTGAAGATTAAGAAA...

Gene: SAG0485: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Streptococcus uberis 0140J

Site:
position = -259
score = 76.59
sequence = AAAATAAGAAAAACA...

Gene: SUB1284: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -354
score = 52.28
sequence = TCTAATTTTACTGAC...

Gene: LACR_2056: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Lactococcus lactis subsp. lactis Il1403

Site:
position = -219
score = 54.16
sequence = TCTAAAGTTACTGAC...

Gene: L0350: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
 
Streptococcus suis 05ZYH33

Gene: SSU05_0489: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Site:
position = -271
score = 76.57
sequence = ATTTAAGATATAGAA...

Gene: SDEG_1499: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Streptococcus gallolyticus UCN34

Site:
position = -316
score = 80.38
sequence = GAATAAGAAAAACAC...

Gene: GALLO_0609: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Streptococcus mitis B6

Site:
position = -250
score = 89.67
sequence = AATATTCTGAGAACA...

Gene: smi_0627: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
Isoleucyl-tRNA synthetase (EC 6.1.1.5)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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