Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog T-box(Gly) - Streptococcaceae

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Gly-tRNA
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptococcus pneumoniae TIGR4 5 1
Streptococcus equi subsp. zooepidemicus MGCS10565 1 1
Streptococcus gordonii str. Challis substr. CH1 3 1
Streptococcus thermophilus CNRZ1066 1 1
Streptococcus mutans UA159 3 1
Streptococcus pyogenes M1 GAS 3 1
Streptococcus sanguinis SK36 4 1
Streptococcus agalactiae 2603V/R 4 1
Streptococcus uberis 0140J 3 1
Lactococcus lactis subsp. cremoris SK11 4 1
Lactococcus lactis subsp. lactis Il1403 3 1
Streptococcus suis 05ZYH33 4 1
Streptococcus dysgalactiae subsp. equisimilis GGS_124 3 1
Streptococcus gallolyticus UCN34 3 1
Streptococcus mitis B6 4 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
SP_1476
*2
Streptococcus pneumoniae TIGR4

Site:
position = -215
score = 40.4
sequence = TATAATAGTCAGCAG...

Gene: SP_1477: hypothetical protein

Gene: SP_1476: hypothetical protein
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus mutans UA159
 
Streptococcus pyogenes M1 GAS
*
Streptococcus sanguinis SK36

Site:
position = -228
score = 39.51
sequence = TATAATCTTTTTTAG...

Gene: SSA_1881: hypothetical protein
 
Streptococcus agalactiae 2603V/R
 
Streptococcus uberis 0140J
 
Lactococcus lactis subsp. cremoris SK11
 
Lactococcus lactis subsp. lactis Il1403
 
Streptococcus suis 05ZYH33
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus gallolyticus UCN34
 
Streptococcus mitis B6
hypothetical protein
glyQ
 
Streptococcus pneumoniae TIGR4

Gene: SP_1475: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
*
Streptococcus equi subsp. zooepidemicus MGCS10565

Site:
position = -356
score = 60.12
sequence = TAAACTAACCAATAG...

Gene: Sez_0486: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
*
Streptococcus gordonii str. Challis substr. CH1

Site:
position = -255
score = 47.55
sequence = TAATCTTTTTTAGAA...

Gene: SGO_0568: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
*
Streptococcus thermophilus CNRZ1066

Site:
position = -233
score = 51.34
sequence = TGATAAGAAAGAAGA...

Gene: str0505: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
*
Streptococcus mutans UA159

Site:
position = -415
score = 60.24
sequence = TGTTAAGAAAGAGAG...

Gene: SMU.445: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
*
Streptococcus pyogenes M1 GAS

Site:
position = -341
score = 47.4
sequence = CTAAACTAGACTCTA...

Gene: SPy1689: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
 
Streptococcus sanguinis SK36

Gene: SSA_1880: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
*
Streptococcus agalactiae 2603V/R

Site:
position = -272
score = 45.33
sequence = TACTGTCTCAGTAAG...

Gene: SAG0268: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
*
Streptococcus uberis 0140J

Site:
position = -366
score = 53.56
sequence = TAAAATGGGTTTCAG...

Gene: SUB1436: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1196: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
*
Lactococcus lactis subsp. lactis Il1403

Site:
position = -102
score = 19.94
sequence = ATAAAGGTGGAACCG...

Gene: L101560: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
 
Streptococcus suis 05ZYH33

Gene: SSU05_1765: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Site:
position = -341
score = 47.4
sequence = CTAAACTAGACTCTA...

Gene: SDEG_1746: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
*
Streptococcus gallolyticus UCN34

Site:
position = -268
score = 49.88
sequence = AATACTCTTTAAAGA...

Gene: GALLO_0391: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
 
Streptococcus mitis B6

Gene: smi_1396: Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)
glyS
 
Streptococcus pneumoniae TIGR4

Gene: SP_1474: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Streptococcus equi subsp. zooepidemicus MGCS10565

Gene: Sez_0487: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Streptococcus gordonii str. Challis substr. CH1

Gene: SGO_0569: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Streptococcus thermophilus CNRZ1066

Gene: str0507: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Streptococcus mutans UA159

Gene: SMU.446: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Streptococcus pyogenes M1 GAS

Gene: SPy1688: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Streptococcus sanguinis SK36

Gene: SSA_1879: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Streptococcus agalactiae 2603V/R

Gene: SAG0270: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Streptococcus uberis 0140J

Gene: SUB1435: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1197: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Lactococcus lactis subsp. lactis Il1403

Gene: L0360: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Streptococcus suis 05ZYH33

Gene: SSU05_1764: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Gene: SDEG_1745: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Streptococcus gallolyticus UCN34

Gene: GALLO_0392: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
 
Streptococcus mitis B6

Gene: smi_1395: Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)
ylaC
 
Streptococcus pneumoniae TIGR4

Gene: SP_1473: hypothetical protein
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gordonii str. Challis substr. CH1

Gene: SGO_0570: hypothetical protein
 
Streptococcus thermophilus CNRZ1066

Gene: str0508: hypothetical protein
 
Streptococcus mutans UA159

Gene: SMU.447: hypothetical protein
 
Streptococcus pyogenes M1 GAS

Gene: SPy1687: hypothetical protein
 
Streptococcus sanguinis SK36

Gene: SSA_1878: hypothetical protein
 
Streptococcus agalactiae 2603V/R

Gene: SAG0271: hypothetical protein
 
Streptococcus uberis 0140J

Gene: SUB1434: hypothetical protein
 
Lactococcus lactis subsp. cremoris SK11

Gene: LACR_1198: hypothetical protein
 
Lactococcus lactis subsp. lactis Il1403

Gene: L104681: hypothetical protein
 
Streptococcus suis 05ZYH33

Gene: SSU05_1763: hypothetical protein
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Gene: SDEG_1744: hypothetical protein
 
Streptococcus gallolyticus UCN34

Gene: GALLO_0393: hypothetical protein
 
Streptococcus mitis B6

Gene: smi_1394: hypothetical protein
hypothetical protein
SAG0269
 
Streptococcus pneumoniae TIGR4
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus mutans UA159
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus agalactiae 2603V/R

Gene: SAG0269: FMN-dependent NADH-azoreductase
 
Streptococcus uberis 0140J
 
Lactococcus lactis subsp. cremoris SK11
 
Lactococcus lactis subsp. lactis Il1403
 
Streptococcus suis 05ZYH33
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus gallolyticus UCN34
 
Streptococcus mitis B6
FMN-dependent NADH-azoreductase
SGO_2086
 
Streptococcus pneumoniae TIGR4
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus mutans UA159
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus agalactiae 2603V/R
 
Streptococcus uberis 0140J
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -109
score = 18.86
sequence = ATAAAGGTGGAACCG...

Gene: LACR_1195: hypothetical protein
 
Lactococcus lactis subsp. lactis Il1403
 
Streptococcus suis 05ZYH33
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus gallolyticus UCN34
 
Streptococcus mitis B6
Chromosome segregation ATPase
smi_1397
 
Streptococcus pneumoniae TIGR4
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus mutans UA159
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus agalactiae 2603V/R
 
Streptococcus uberis 0140J
 
Lactococcus lactis subsp. cremoris SK11
 
Lactococcus lactis subsp. lactis Il1403
 
Streptococcus suis 05ZYH33
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus gallolyticus UCN34
*
Streptococcus mitis B6

Site:
position = -231
score = 42.01
sequence = GTCAGCAGGAAAGAA...

Gene: smi_1397: hypothetical protein
hypothetical protein
ycfH
 
Streptococcus pneumoniae TIGR4
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus mutans UA159
 
Streptococcus pyogenes M1 GAS
 
Streptococcus sanguinis SK36
 
Streptococcus agalactiae 2603V/R
 
Streptococcus uberis 0140J
 
Lactococcus lactis subsp. cremoris SK11
 
Lactococcus lactis subsp. lactis Il1403
*
Streptococcus suis 05ZYH33

Site:
position = -198
score = 46.83
sequence = AATACTAAGCATGAA...

Gene: SSU05_1766: Phage envelope protein
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus gallolyticus UCN34
 
Streptococcus mitis B6
hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD