Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog yybP-ykoY - Streptococcaceae

Properties
Regulator type: RNA regulatory element
Name: yybP-ykoY
RFAM: RF00080
Regulation mode:
Biological process:
Effector:
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptococcus pneumoniae TIGR4 1 1
Streptococcus gallolyticus UCN34 1 1
Streptococcus dysgalactiae subsp. equisimilis GGS_124 1 1
Streptococcus suis 05ZYH33 2 1
Lactococcus lactis subsp. lactis Il1403 1 1
Lactococcus lactis subsp. cremoris SK11 1 1
Streptococcus uberis 0140J 1 1
Streptococcus agalactiae 2603V/R 1 1
Streptococcus sanguinis SK36 1 1
Streptococcus pyogenes M1 GAS 1 1
Streptococcus mutans UA159 1 1
Streptococcus thermophilus CNRZ1066 1 1
Streptococcus gordonii str. Challis substr. CH1 1 1
Streptococcus equi subsp. zooepidemicus MGCS10565 1 1
Streptococcus mitis B6 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
atcL
*
Streptococcus pneumoniae TIGR4

Site:
position = -148
score = 48.22
sequence = ATGGTACTACTCAAG...

Gene: SP_1551: Calcium-transporting ATPase (EC 3.6.3.8)
*
Streptococcus gallolyticus UCN34

Site:
position = -134
score = 34.85
sequence = TTTGCGACTGAAAAA...

Gene: GALLO_1503: Calcium-transporting ATPase (EC 3.6.3.8)
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Site:
position = -156
score = 70.61
sequence = TTATTATATCAAGGG...

Gene: SDEG_0641: Calcium-transporting ATPase (EC 3.6.3.8)
*2
Streptococcus suis 05ZYH33

Site:
position = -220
score = 50.62
sequence = AGTTAACAAATCGAG...

Gene: SSU05_1419: Calcium-transporting ATPase (EC 3.6.3.8)

Gene: SSU05_1418: Calcium-transporting ATPase (EC 3.6.3.8)
*
Lactococcus lactis subsp. lactis Il1403

Site:
position = -184
score = 88.53
sequence = TAAATATTCCAAAGG...

Gene: L2866: Calcium-transporting ATPase (EC 3.6.3.8)
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -184
score = 85.03
sequence = TAAATATTCCAAAGG...

Gene: LACR_1501: Calcium-transporting ATPase (EC 3.6.3.8)
*
Streptococcus uberis 0140J

Site:
position = -155
score = 66.88
sequence = TAACTATATCAAGGG...

Gene: SUB0614: Calcium-transporting ATPase (EC 3.6.3.8)
*
Streptococcus agalactiae 2603V/R

Site:
position = -146
score = 71.86
sequence = TTAACATATCAAGGG...

Gene: SAG0514: Calcium-transporting ATPase (EC 3.6.3.8)
*
Streptococcus sanguinis SK36

Site:
position = -139
score = 69.7
sequence = GTTTTTACTCAAGGG...

Gene: SSA_0866: Calcium-transporting ATPase (EC 3.6.3.8)
*
Streptococcus pyogenes M1 GAS

Site:
position = -159
score = 70.47
sequence = TTATTATATCAAGGG...

Gene: SPy0623: Calcium-transporting ATPase (EC 3.6.3.8)
*
Streptococcus mutans UA159

Site:
position = -145
score = 60.31
sequence = GAAGATTATCAAGGG...

Gene: SMU.723: Calcium-transporting ATPase (EC 3.6.3.8)
*
Streptococcus thermophilus CNRZ1066

Site:
position = -209
score = 57.06
sequence = AAAGGAAAAATCAAG...

Gene: str1150: Calcium-transporting ATPase (EC 3.6.3.8)
*
Streptococcus gordonii str. Challis substr. CH1

Site:
position = -153
score = 66.71
sequence = GATAAACAACTCAAG...

Gene: SGO_1619: Calcium-transporting ATPase (EC 3.6.3.8)
*
Streptococcus equi subsp. zooepidemicus MGCS10565

Site:
position = -159
score = 68.05
sequence = AGTGACTATATCAAG...

Gene: Sez_1314: Calcium-transporting ATPase (EC 3.6.3.8)
*
Streptococcus mitis B6

Site:
position = -198
score = 45.86
sequence = AGTACTACTCAAGGG...

Gene: smi_1543: Calcium-transporting ATPase (EC 3.6.3.8)
Calcium-transporting ATPase (EC 3.6.3.8)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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